RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
SMARCD2-209ENST00000581832 CABP4P57796 275 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 ITPK1Q13572 414 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
SMARCD2-209ENST00000581832 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 SLC16A10Q8TF71 515 aa16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 MRC1P22897 1456 aa16.65■□□□□ 0.26
SMARCD2-209ENST00000581832 UTRNP46939 3433 aa16.64■□□□□ 0.25
SMARCD2-209ENST00000581832 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
SMARCD2-209ENST00000581832 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
SMARCD2-209ENST00000581832 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
SMARCD2-209ENST00000581832 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
SMARCD2-209ENST00000581832 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
SMARCD2-209ENST00000581832 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
SMARCD2-209ENST00000581832 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
SMARCD2-209ENST00000581832 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
SMARCD2-209ENST00000581832 FCHSD2O94868 740 aa16.61■□□□□ 0.25
SMARCD2-209ENST00000581832 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
SMARCD2-209ENST00000581832 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
SMARCD2-209ENST00000581832 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-209ENST00000581832 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMARCD2-209ENST00000581832 RALBP1Q15311 655 aa16.6■□□□□ 0.25
SMARCD2-209ENST00000581832 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
SMARCD2-209ENST00000581832 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-209ENST00000581832 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-209ENST00000581832 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-209ENST00000581832 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-209ENST00000581832 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-209ENST00000581832 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
SMARCD2-209ENST00000581832 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
SMARCD2-209ENST00000581832 AK7Q96M32 723 aa16.58■□□□□ 0.24
SMARCD2-209ENST00000581832 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
SMARCD2-209ENST00000581832 MAP3K5Q99683 1374 aa16.58■□□□□ 0.24
SMARCD2-209ENST00000581832 TJP1Q07157 1748 aa16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 SSFA2P28290 1259 aa16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 SLC39A6Q13433 755 aa16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 RC3H1Q5TC82 1133 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 ARXQ96QS3 562 aa16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
SMARCD2-209ENST00000581832 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
SMARCD2-209ENST00000581832 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
SMARCD2-209ENST00000581832 CNTNAP4Q9C0A0 1308 aa16.55■□□□□ 0.24
SMARCD2-209ENST00000581832 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
SMARCD2-209ENST00000581832 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-209ENST00000581832 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
SMARCD2-209ENST00000581832 GNPATO15228 680 aa16.54■□□□□ 0.24
SMARCD2-209ENST00000581832 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-209ENST00000581832 MSH5O43196 834 aa16.53■□□□□ 0.24
SMARCD2-209ENST00000581832 PHF14O94880 888 aa16.53■□□□□ 0.24
SMARCD2-209ENST00000581832 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 CRKLP46109 303 aaKnown RBP16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-209ENST00000581832 POLD1P28340 1107 aa16.51■□□□□ 0.23
SMARCD2-209ENST00000581832 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-209ENST00000581832 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 TEFQ10587 303 aa16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
SMARCD2-209ENST00000581832 ADRA2BP18089 450 aa16.49■□□□□ 0.23
SMARCD2-209ENST00000581832 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
SMARCD2-209ENST00000581832 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
SMARCD2-209ENST00000581832 MCM10Q7L590 875 aa16.49■□□□□ 0.23
SMARCD2-209ENST00000581832 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
SMARCD2-209ENST00000581832 KCNQ3O43525 872 aa16.48■□□□□ 0.23
SMARCD2-209ENST00000581832 GYS1P13807 737 aa16.46■□□□□ 0.23
SMARCD2-209ENST00000581832 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
SMARCD2-209ENST00000581832 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
SMARCD2-209ENST00000581832 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
SMARCD2-209ENST00000581832 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-209ENST00000581832 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-209ENST00000581832 ZBTB1Q9Y2K1 713 aa16.44■□□□□ 0.22
SMARCD2-209ENST00000581832 RFC4P35249 363 aa16.43■□□□□ 0.22
SMARCD2-209ENST00000581832 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
SMARCD2-209ENST00000581832 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
SMARCD2-209ENST00000581832 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
SMARCD2-209ENST00000581832 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
SMARCD2-209ENST00000581832 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-209ENST00000581832 CD2APQ9Y5K6 639 aa16.42■□□□□ 0.22
SMARCD2-209ENST00000581832 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
SMARCD2-209ENST00000581832 NEFMP07197 916 aa16.41■□□□□ 0.22
SMARCD2-209ENST00000581832 MMP10P09238 476 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms