RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 C4BP0C0L5 1744 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 MSH5O43196 834 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 SYT17Q9BSW7 474 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
PSMD3-205ENST00000580980 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
PSMD3-205ENST00000580980 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
PSMD3-205ENST00000580980 SSFA2P28290 1259 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 ITPK1Q13572 414 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
PSMD3-205ENST00000580980 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
PSMD3-205ENST00000580980 ZNF831Q5JPB2 1677 aa16.34■□□□□ 0.21
PSMD3-205ENST00000580980 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
PSMD3-205ENST00000580980 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
PSMD3-205ENST00000580980 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
PSMD3-205ENST00000580980 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
PSMD3-205ENST00000580980 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.2
PSMD3-205ENST00000580980 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
PSMD3-205ENST00000580980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
PSMD3-205ENST00000580980 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
PSMD3-205ENST00000580980 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
PSMD3-205ENST00000580980 MRC1P22897 1456 aa16.31■□□□□ 0.2
PSMD3-205ENST00000580980 GNPATO15228 680 aa16.31■□□□□ 0.2
PSMD3-205ENST00000580980 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
PSMD3-205ENST00000580980 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
PSMD3-205ENST00000580980 PHF14O94880 888 aa16.3■□□□□ 0.2
PSMD3-205ENST00000580980 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
PSMD3-205ENST00000580980 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
PSMD3-205ENST00000580980 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
PSMD3-205ENST00000580980 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
PSMD3-205ENST00000580980 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
PSMD3-205ENST00000580980 FCHSD2O94868 740 aa16.29■□□□□ 0.2
PSMD3-205ENST00000580980 ADRA2BP18089 450 aa16.29■□□□□ 0.2
PSMD3-205ENST00000580980 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
PSMD3-205ENST00000580980 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
PSMD3-205ENST00000580980 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
PSMD3-205ENST00000580980 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
PSMD3-205ENST00000580980 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
PSMD3-205ENST00000580980 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
PSMD3-205ENST00000580980 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
PSMD3-205ENST00000580980 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
PSMD3-205ENST00000580980 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
PSMD3-205ENST00000580980 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
PSMD3-205ENST00000580980 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
PSMD3-205ENST00000580980 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
PSMD3-205ENST00000580980 TEFQ10587 303 aa16.25■□□□□ 0.19
PSMD3-205ENST00000580980 RALBP1Q15311 655 aa16.25■□□□□ 0.19
PSMD3-205ENST00000580980 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
PSMD3-205ENST00000580980 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
PSMD3-205ENST00000580980 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
PSMD3-205ENST00000580980 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
PSMD3-205ENST00000580980 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
PSMD3-205ENST00000580980 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
PSMD3-205ENST00000580980 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
PSMD3-205ENST00000580980 RFC4P35249 363 aa16.23■□□□□ 0.19
PSMD3-205ENST00000580980 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
PSMD3-205ENST00000580980 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
PSMD3-205ENST00000580980 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
PSMD3-205ENST00000580980 HTATSF1O43719 755 aaKnown RBP16.22■□□□□ 0.19
PSMD3-205ENST00000580980 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
PSMD3-205ENST00000580980 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 NEFMP07197 916 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 YY1P25490 414 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 GPR162Q16538 588 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
PSMD3-205ENST00000580980 NLGN2Q8NFZ4 835 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 TJP1Q07157 1748 aa16.21■□□□□ 0.19
PSMD3-205ENST00000580980 CYP19A1P11511 503 aaPredicted RBP16.2■□□□□ 0.18
PSMD3-205ENST00000580980 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
PSMD3-205ENST00000580980 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
PSMD3-205ENST00000580980 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
PSMD3-205ENST00000580980 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
PSMD3-205ENST00000580980 MMP10P09238 476 aa16.19■□□□□ 0.18
PSMD3-205ENST00000580980 GYS1P13807 737 aa16.19■□□□□ 0.18
PSMD3-205ENST00000580980 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
PSMD3-205ENST00000580980 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
PSMD3-205ENST00000580980 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 BTBD11A6QL63 1104 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 STARD3NLO95772 234 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
PSMD3-205ENST00000580980 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 PLEKHF1Q96S99 279 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 UBR2Q8IWV8 1755 aa16.17■□□□□ 0.18
PSMD3-205ENST00000580980 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
PSMD3-205ENST00000580980 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
PSMD3-205ENST00000580980 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
PSMD3-205ENST00000580980 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
PSMD3-205ENST00000580980 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
PSMD3-205ENST00000580980 ZPR1O75312 459 aa16.15■□□□□ 0.18
PSMD3-205ENST00000580980 MCM10Q7L590 875 aa16.15■□□□□ 0.18
PSMD3-205ENST00000580980 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
PSMD3-205ENST00000580980 PARP3Q9Y6F1 533 aa16.15■□□□□ 0.18
PSMD3-205ENST00000580980 ZBTB1Q9Y2K1 713 aa16.14■□□□□ 0.17
PSMD3-205ENST00000580980 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms