RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 WDR90Q96KV7 1748 aa22.14■■□□□ 1.13
IFT20-209ENST00000579419 TMOD3Q9NYL9 352 aa22.13■■□□□ 1.13
IFT20-209ENST00000579419 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
IFT20-209ENST00000579419 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
IFT20-209ENST00000579419 FCHSD2O94868 740 aa22.12■■□□□ 1.13
IFT20-209ENST00000579419 C9orf131Q5VYM1 1079 aa22.12■■□□□ 1.13
IFT20-209ENST00000579419 JMYQ8N9B5 988 aa22.12■■□□□ 1.13
IFT20-209ENST00000579419 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
IFT20-209ENST00000579419 KIF13BQ9NQT8 1826 aa22.1■■□□□ 1.13
IFT20-209ENST00000579419 NCAPD2Q15021 1401 aa22.1■■□□□ 1.13
IFT20-209ENST00000579419 KCNA3P22001 575 aa22.09■■□□□ 1.13
IFT20-209ENST00000579419 TMF1P82094 1093 aa22.09■■□□□ 1.13
IFT20-209ENST00000579419 TRAPPC3LQ5T215 181 aa22.09■■□□□ 1.13
IFT20-209ENST00000579419 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
IFT20-209ENST00000579419 SPG7Q9UQ90 795 aa22.09■■□□□ 1.13
IFT20-209ENST00000579419 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
IFT20-209ENST00000579419 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
IFT20-209ENST00000579419 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.12
IFT20-209ENST00000579419 GYS1P13807 737 aa22.07■■□□□ 1.12
IFT20-209ENST00000579419 NLGN1Q8N2Q7 840 aa22.07■■□□□ 1.12
IFT20-209ENST00000579419 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
IFT20-209ENST00000579419 CCDC87Q9NVE4 849 aa22.07■■□□□ 1.12
IFT20-209ENST00000579419 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
IFT20-209ENST00000579419 KDRP35968 1356 aa22.07■■□□□ 1.12
IFT20-209ENST00000579419 PHKG2P15735 406 aa22.06■■□□□ 1.12
IFT20-209ENST00000579419 TNS4Q8IZW8 715 aa22.06■■□□□ 1.12
IFT20-209ENST00000579419 FSTL1Q12841 308 aa22.05■■□□□ 1.12
IFT20-209ENST00000579419 RRAGCQ9HB90 399 aa22.05■■□□□ 1.12
IFT20-209ENST00000579419 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
IFT20-209ENST00000579419 EYA1Q99502 592 aa22.04■■□□□ 1.12
IFT20-209ENST00000579419 C4AP0C0L4 1744 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 TONSLQ96HA7 1378 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 IFNL2Q8IZJ0 200 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 RNF181Q9P0P0 153 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 PCNTO95613 3336 aa22.03■■□□□ 1.12
IFT20-209ENST00000579419 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
IFT20-209ENST00000579419 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
IFT20-209ENST00000579419 PRELPP51888 382 aa22.01■■□□□ 1.11
IFT20-209ENST00000579419 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
IFT20-209ENST00000579419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
IFT20-209ENST00000579419 PIM2Q9P1W9 311 aa22■■□□□ 1.11
IFT20-209ENST00000579419 KIF20BQ96Q89 1820 aa22■■□□□ 1.11
IFT20-209ENST00000579419 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
IFT20-209ENST00000579419 KDM2BQ8NHM5 1336 aa22■■□□□ 1.11
IFT20-209ENST00000579419 RPS6KA4O75676 772 aa21.99■■□□□ 1.11
IFT20-209ENST00000579419 RFC4P35249 363 aa21.99■■□□□ 1.11
IFT20-209ENST00000579419 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
IFT20-209ENST00000579419 ADRA2BP18089 450 aa21.98■■□□□ 1.11
IFT20-209ENST00000579419 CHRNA5P30532 468 aa21.98■■□□□ 1.11
IFT20-209ENST00000579419 DALRD3Q5D0E6 543 aaKnown RBP21.98■■□□□ 1.11
IFT20-209ENST00000579419 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
IFT20-209ENST00000579419 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
IFT20-209ENST00000579419 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
IFT20-209ENST00000579419 DDR1Q08345 913 aa21.97■■□□□ 1.11
IFT20-209ENST00000579419 SLC24A1O60721 1099 aa21.96■■□□□ 1.11
IFT20-209ENST00000579419 RASSF7Q02833 373 aa21.95■■□□□ 1.1
IFT20-209ENST00000579419 FKBP8Q14318 412 aa21.95■■□□□ 1.1
IFT20-209ENST00000579419 SMC1BQ8NDV3 1235 aa21.95■■□□□ 1.1
IFT20-209ENST00000579419 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
IFT20-209ENST00000579419 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
IFT20-209ENST00000579419 ARFGEF1Q9Y6D6 1849 aa21.94■■□□□ 1.1
IFT20-209ENST00000579419 COL5A3P25940 1745 aaPredicted RBP21.92■■□□□ 1.1
IFT20-209ENST00000579419 ERVV-2B6SEH9 535 aa21.92■■□□□ 1.1
IFT20-209ENST00000579419 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
IFT20-209ENST00000579419 POLKQ9UBT6 870 aa21.92■■□□□ 1.1
IFT20-209ENST00000579419 ANKRD26Q9UPS8 1709 aa21.91■■□□□ 1.1
IFT20-209ENST00000579419 KDM6AO15550 1401 aaPredicted RBP21.9■■□□□ 1.1
IFT20-209ENST00000579419 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
IFT20-209ENST00000579419 MYH14Q7Z406 1995 aaKnown RBP21.9■■□□□ 1.1
IFT20-209ENST00000579419 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
IFT20-209ENST00000579419 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
IFT20-209ENST00000579419 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
IFT20-209ENST00000579419 CRKLP46109 303 aaKnown RBP21.89■■□□□ 1.09
IFT20-209ENST00000579419 POLRMTO00411 1230 aaKnown RBP21.88■■□□□ 1.09
IFT20-209ENST00000579419 CABP4P57796 275 aa21.87■■□□□ 1.09
IFT20-209ENST00000579419 TM4SF1P30408 202 aa21.85■■□□□ 1.09
IFT20-209ENST00000579419 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
IFT20-209ENST00000579419 ZNF530Q6P9A1 599 aaPredicted RBP21.84■■□□□ 1.09
IFT20-209ENST00000579419 SBF1O95248 1867 aa21.83■■□□□ 1.09
IFT20-209ENST00000579419 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
IFT20-209ENST00000579419 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
IFT20-209ENST00000579419 VEGFAP15692 232 aaPredicted RBP21.83■■□□□ 1.09
IFT20-209ENST00000579419 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
IFT20-209ENST00000579419 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
IFT20-209ENST00000579419 USPL1Q5W0Q7 1092 aa21.82■■□□□ 1.08
IFT20-209ENST00000579419 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
IFT20-209ENST00000579419 POTECB2RU33 542 aa21.81■■□□□ 1.08
IFT20-209ENST00000579419 LMNB1P20700 586 aa21.81■■□□□ 1.08
IFT20-209ENST00000579419 PLEKHO1Q53GL0 409 aaPredicted RBP21.81■■□□□ 1.08
IFT20-209ENST00000579419 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
IFT20-209ENST00000579419 TJP1Q07157 1748 aa21.8■■□□□ 1.08
IFT20-209ENST00000579419 ADAMTS7Q9UKP4 1686 aa21.79■■□□□ 1.08
IFT20-209ENST00000579419 MTHFSP49914 203 aa21.79■■□□□ 1.08
IFT20-209ENST00000579419 NFKBIEO00221 500 aa21.78■■□□□ 1.08
IFT20-209ENST00000579419 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
IFT20-209ENST00000579419 DNAJC10Q8IXB1 793 aa21.78■■□□□ 1.08
IFT20-209ENST00000579419 NFIXQ14938 502 aa21.77■■□□□ 1.08
IFT20-209ENST00000579419 ZPR1O75312 459 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms