RNA–Protein interactions for RNA: ENST00000579256.1

AC004408.1-201, humanhuman

TSL 4 BASIC

Gene AC004408.1, Length 573 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004408.1-201ENST00000579256 KDRP35968 1356 aa22.35■■□□□ 1.17
AC004408.1-201ENST00000579256 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.17
AC004408.1-201ENST00000579256 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.17
AC004408.1-201ENST00000579256 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
AC004408.1-201ENST00000579256 PLEKHO1Q53GL0 409 aaPredicted RBP22.33■■□□□ 1.17
AC004408.1-201ENST00000579256 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.17
AC004408.1-201ENST00000579256 CHD4Q14839 1912 aa22.32■■□□□ 1.16
AC004408.1-201ENST00000579256 ERVV-2B6SEH9 535 aa22.32■■□□□ 1.16
AC004408.1-201ENST00000579256 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
AC004408.1-201ENST00000579256 SULT6B1Q6IMI4 303 aa22.31■■□□□ 1.16
AC004408.1-201ENST00000579256 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
AC004408.1-201ENST00000579256 SSFA2P28290 1259 aa22.3■■□□□ 1.16
AC004408.1-201ENST00000579256 GNPATO15228 680 aa22.29■■□□□ 1.16
AC004408.1-201ENST00000579256 HMGB2P26583 209 aaKnown RBP22.28■■□□□ 1.16
AC004408.1-201ENST00000579256 AMOTQ4VCS5 1084 aa22.28■■□□□ 1.16
AC004408.1-201ENST00000579256 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
AC004408.1-201ENST00000579256 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
AC004408.1-201ENST00000579256 MTHFSP49914 203 aa22.27■■□□□ 1.16
AC004408.1-201ENST00000579256 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
AC004408.1-201ENST00000579256 CABP4P57796 275 aa22.25■■□□□ 1.15
AC004408.1-201ENST00000579256 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
AC004408.1-201ENST00000579256 ZNF831Q5JPB2 1677 aa22.23■■□□□ 1.15
AC004408.1-201ENST00000579256 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
AC004408.1-201ENST00000579256 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
AC004408.1-201ENST00000579256 MYH14Q7Z406 1995 aaKnown RBP22.21■■□□□ 1.15
AC004408.1-201ENST00000579256 HMOX1P09601 288 aa22.21■■□□□ 1.15
AC004408.1-201ENST00000579256 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
AC004408.1-201ENST00000579256 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
AC004408.1-201ENST00000579256 LGR6Q9HBX8 967 aa22.21■■□□□ 1.15
AC004408.1-201ENST00000579256 PTCD1O75127 700 aaKnown RBP22.2■■□□□ 1.14
AC004408.1-201ENST00000579256 ARHGEF1Q92888 912 aaKnown RBP22.2■■□□□ 1.14
AC004408.1-201ENST00000579256 CNTNAP4Q9C0A0 1308 aa22.2■■□□□ 1.14
AC004408.1-201ENST00000579256 GRIN3BO60391 1043 aa22.19■■□□□ 1.14
AC004408.1-201ENST00000579256 WWC3Q9ULE0 1092 aa22.19■■□□□ 1.14
AC004408.1-201ENST00000579256 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
AC004408.1-201ENST00000579256 SCN11AQ9UI33 1791 aa22.18■■□□□ 1.14
AC004408.1-201ENST00000579256 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
AC004408.1-201ENST00000579256 MMP10P09238 476 aa22.18■■□□□ 1.14
AC004408.1-201ENST00000579256 TRAPPC3LQ5T215 181 aa22.18■■□□□ 1.14
AC004408.1-201ENST00000579256 RPS6KA4O75676 772 aa22.17■■□□□ 1.14
AC004408.1-201ENST00000579256 AKAP4Q5JQC9 854 aa22.17■■□□□ 1.14
AC004408.1-201ENST00000579256 MTHFSDQ2M296 383 aaKnown RBP22.16■■□□□ 1.14
AC004408.1-201ENST00000579256 TJP1Q07157 1748 aa22.16■■□□□ 1.14
AC004408.1-201ENST00000579256 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
AC004408.1-201ENST00000579256 GYS1P13807 737 aa22.15■■□□□ 1.14
AC004408.1-201ENST00000579256 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
AC004408.1-201ENST00000579256 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.13
AC004408.1-201ENST00000579256 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
AC004408.1-201ENST00000579256 CRKLP46109 303 aaKnown RBP22.14■■□□□ 1.13
AC004408.1-201ENST00000579256 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
AC004408.1-201ENST00000579256 MRC1P22897 1456 aa22.14■■□□□ 1.13
AC004408.1-201ENST00000579256 ADRA2BP18089 450 aa22.13■■□□□ 1.13
AC004408.1-201ENST00000579256 INTS5Q6P9B9 1019 aaKnown RBP22.13■■□□□ 1.13
AC004408.1-201ENST00000579256 KIAA1551Q9HCM1 1747 aa22.13■■□□□ 1.13
AC004408.1-201ENST00000579256 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
AC004408.1-201ENST00000579256 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
AC004408.1-201ENST00000579256 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
AC004408.1-201ENST00000579256 SLC39A6Q13433 755 aa22.12■■□□□ 1.13
AC004408.1-201ENST00000579256 SRP68Q9UHB9 627 aaKnown RBP22.12■■□□□ 1.13
AC004408.1-201ENST00000579256 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
AC004408.1-201ENST00000579256 DNAJC10Q8IXB1 793 aa22.11■■□□□ 1.13
AC004408.1-201ENST00000579256 NLGN1Q8N2Q7 840 aa22.11■■□□□ 1.13
AC004408.1-201ENST00000579256 RFC4P35249 363 aa22.1■■□□□ 1.13
AC004408.1-201ENST00000579256 C1QTNF8P60827 252 aa22.1■■□□□ 1.13
AC004408.1-201ENST00000579256 C10orf71Q711Q0 1435 aa22.1■■□□□ 1.13
AC004408.1-201ENST00000579256 KIF13BQ9NQT8 1826 aa22.1■■□□□ 1.13
AC004408.1-201ENST00000579256 KCPQ6ZWJ8 1503 aa22.09■■□□□ 1.13
AC004408.1-201ENST00000579256 ADCY9O60503 1353 aa22.09■■□□□ 1.13
AC004408.1-201ENST00000579256 ATP10DQ9P241 1426 aa22.08■■□□□ 1.13
AC004408.1-201ENST00000579256 FKBP8Q14318 412 aa22.08■■□□□ 1.13
AC004408.1-201ENST00000579256 A0A0G2JLW4 131 aa22.07■■□□□ 1.12
AC004408.1-201ENST00000579256 VIRMAQ69YN4 1812 aaKnown RBP22.07■■□□□ 1.12
AC004408.1-201ENST00000579256 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
AC004408.1-201ENST00000579256 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
AC004408.1-201ENST00000579256 DDR1Q08345 913 aa22.06■■□□□ 1.12
AC004408.1-201ENST00000579256 N4BP2Q86UW6 1770 aaPredicted RBP22.06■■□□□ 1.12
AC004408.1-201ENST00000579256 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 DPEP1P16444 411 aa22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 KCNA3P22001 575 aa22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 TGFB2P61812 414 aa22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 CCDC87Q9NVE4 849 aa22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 SOS1Q07889 1333 aaPredicted RBP22.04■■□□□ 1.12
AC004408.1-201ENST00000579256 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
AC004408.1-201ENST00000579256 PHACTR3Q96KR7 559 aa22.02■■□□□ 1.12
AC004408.1-201ENST00000579256 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
AC004408.1-201ENST00000579256 TM4SF1P30408 202 aa22.01■■□□□ 1.11
AC004408.1-201ENST00000579256 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
AC004408.1-201ENST00000579256 USPL1Q5W0Q7 1092 aa22■■□□□ 1.11
AC004408.1-201ENST00000579256 UBR2Q8IWV8 1755 aa21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 POLRMTO00411 1230 aaKnown RBP21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 RSPH6AQ9H0K4 717 aa21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 BCL2L12Q9HB09 334 aa21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
AC004408.1-201ENST00000579256 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
AC004408.1-201ENST00000579256 CEP350Q5VT06 3117 aa21.98■■□□□ 1.11
AC004408.1-201ENST00000579256 BRCA1P38398 1863 aaKnown RBP21.98■■□□□ 1.11
AC004408.1-201ENST00000579256 GNAT3A8MTJ3 354 aa21.97■■□□□ 1.11
AC004408.1-201ENST00000579256 PPP2R1AP30153 589 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms