RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 RBM42Q9BTD8 480 aaKnown RBP23.77■■□□□ 1.4
SLC9A3R1-203ENST00000578958 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
SLC9A3R1-203ENST00000578958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.76■■□□□ 1.39
SLC9A3R1-203ENST00000578958 SSFA2P28290 1259 aa23.76■■□□□ 1.39
SLC9A3R1-203ENST00000578958 IL13P35225 146 aa23.76■■□□□ 1.39
SLC9A3R1-203ENST00000578958 LINC00116Q8NCU8 138 aa23.76■■□□□ 1.39
SLC9A3R1-203ENST00000578958 GNPATO15228 680 aa23.75■■□□□ 1.39
SLC9A3R1-203ENST00000578958 ITPK1Q13572 414 aa23.74■■□□□ 1.39
SLC9A3R1-203ENST00000578958 NLGN2Q8NFZ4 835 aa23.73■■□□□ 1.39
SLC9A3R1-203ENST00000578958 COL24A1Q17RW2 1714 aa23.73■■□□□ 1.39
SLC9A3R1-203ENST00000578958 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
SLC9A3R1-203ENST00000578958 SMIM5Q71RC9 77 aa23.72■■□□□ 1.39
SLC9A3R1-203ENST00000578958 KDRP35968 1356 aa23.7■■□□□ 1.38
SLC9A3R1-203ENST00000578958 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.38
SLC9A3R1-203ENST00000578958 HMOX1P09601 288 aa23.7■■□□□ 1.38
SLC9A3R1-203ENST00000578958 RTCBQ9Y3I0 505 aaKnown RBP23.7■■□□□ 1.38
SLC9A3R1-203ENST00000578958 AMIGO3Q86WK7 504 aa23.69■■□□□ 1.38
SLC9A3R1-203ENST00000578958 NFATC2IPQ8NCF5 419 aa23.69■■□□□ 1.38
SLC9A3R1-203ENST00000578958 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
SLC9A3R1-203ENST00000578958 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
SLC9A3R1-203ENST00000578958 UTRNP46939 3433 aa23.68■■□□□ 1.38
SLC9A3R1-203ENST00000578958 TRAPPC3LQ5T215 181 aa23.68■■□□□ 1.38
SLC9A3R1-203ENST00000578958 PTCD1O75127 700 aaKnown RBP23.67■■□□□ 1.38
SLC9A3R1-203ENST00000578958 AKAP4Q5JQC9 854 aa23.67■■□□□ 1.38
SLC9A3R1-203ENST00000578958 GRIN3BO60391 1043 aa23.66■■□□□ 1.38
SLC9A3R1-203ENST00000578958 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
SLC9A3R1-203ENST00000578958 RC3H1Q5TC82 1133 aaKnown RBP23.64■■□□□ 1.37
SLC9A3R1-203ENST00000578958 ZNF784Q8NCA9 323 aaPredicted RBP23.64■■□□□ 1.37
SLC9A3R1-203ENST00000578958 U2SURPO15042 1029 aaKnown RBP23.63■■□□□ 1.37
SLC9A3R1-203ENST00000578958 SLC4A9Q96Q91 983 aa23.63■■□□□ 1.37
SLC9A3R1-203ENST00000578958 NPC1L1Q9UHC9 1359 aa23.63■■□□□ 1.37
SLC9A3R1-203ENST00000578958 CHD4Q14839 1912 aa23.63■■□□□ 1.37
SLC9A3R1-203ENST00000578958 RFC4P35249 363 aa23.62■■□□□ 1.37
SLC9A3R1-203ENST00000578958 CNTNAP4Q9C0A0 1308 aa23.61■■□□□ 1.37
SLC9A3R1-203ENST00000578958 ADRA2BP18089 450 aa23.61■■□□□ 1.37
SLC9A3R1-203ENST00000578958 RPS6KA4O75676 772 aa23.6■■□□□ 1.37
SLC9A3R1-203ENST00000578958 NLGN1Q8N2Q7 840 aa23.6■■□□□ 1.37
SLC9A3R1-203ENST00000578958 SLC52A2Q9HAB3 445 aa23.6■■□□□ 1.37
SLC9A3R1-203ENST00000578958 MMP10P09238 476 aa23.59■■□□□ 1.37
SLC9A3R1-203ENST00000578958 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
SLC9A3R1-203ENST00000578958 ARHGEF1Q92888 912 aaKnown RBP23.59■■□□□ 1.37
SLC9A3R1-203ENST00000578958 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
SLC9A3R1-203ENST00000578958 LGR6Q9HBX8 967 aa23.59■■□□□ 1.37
SLC9A3R1-203ENST00000578958 RNMTO43148 476 aaKnown RBP23.58■■□□□ 1.37
SLC9A3R1-203ENST00000578958 MTHFSDQ2M296 383 aaKnown RBP23.58■■□□□ 1.37
SLC9A3R1-203ENST00000578958 GOLGB1Q14789 3259 aaKnown RBP23.57■■□□□ 1.36
SLC9A3R1-203ENST00000578958 ZNF831Q5JPB2 1677 aa23.57■■□□□ 1.36
SLC9A3R1-203ENST00000578958 CRKLP46109 303 aaKnown RBP23.56■■□□□ 1.36
SLC9A3R1-203ENST00000578958 SCN11AQ9UI33 1791 aa23.55■■□□□ 1.36
SLC9A3R1-203ENST00000578958 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
SLC9A3R1-203ENST00000578958 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
SLC9A3R1-203ENST00000578958 SLC39A6Q13433 755 aa23.53■■□□□ 1.36
SLC9A3R1-203ENST00000578958 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
SLC9A3R1-203ENST00000578958 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
SLC9A3R1-203ENST00000578958 COL5A3P25940 1745 aaPredicted RBP23.52■■□□□ 1.36
SLC9A3R1-203ENST00000578958 GYS1P13807 737 aa23.51■■□□□ 1.35
SLC9A3R1-203ENST00000578958 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
SLC9A3R1-203ENST00000578958 TTC5Q8N0Z6 440 aa23.51■■□□□ 1.35
SLC9A3R1-203ENST00000578958 CCDC87Q9NVE4 849 aa23.51■■□□□ 1.35
SLC9A3R1-203ENST00000578958 TEFQ10587 303 aa23.5■■□□□ 1.35
SLC9A3R1-203ENST00000578958 GNAT3A8MTJ3 354 aa23.49■■□□□ 1.35
SLC9A3R1-203ENST00000578958 COL3A1P02461 1466 aaPredicted RBP23.49■■□□□ 1.35
SLC9A3R1-203ENST00000578958 ZPR1O75312 459 aa23.48■■□□□ 1.35
SLC9A3R1-203ENST00000578958 TGFB2P61812 414 aa23.47■■□□□ 1.35
SLC9A3R1-203ENST00000578958 INTS5Q6P9B9 1019 aaKnown RBP23.47■■□□□ 1.35
SLC9A3R1-203ENST00000578958 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
SLC9A3R1-203ENST00000578958 MRC1P22897 1456 aa23.47■■□□□ 1.35
SLC9A3R1-203ENST00000578958 CICQ96RK0 1608 aaPredicted RBP23.46■■□□□ 1.35
SLC9A3R1-203ENST00000578958 MYH14Q7Z406 1995 aaKnown RBP23.45■■□□□ 1.35
SLC9A3R1-203ENST00000578958 USP42Q9H9J4 1324 aaKnown RBP23.45■■□□□ 1.34
SLC9A3R1-203ENST00000578958 U2AF1L5P0DN76 240 aaPredicted RBP23.45■■□□□ 1.34
SLC9A3R1-203ENST00000578958 PPP2R1AP30153 589 aa23.45■■□□□ 1.34
SLC9A3R1-203ENST00000578958 PRKAR2BP31323 418 aa23.45■■□□□ 1.34
SLC9A3R1-203ENST00000578958 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
SLC9A3R1-203ENST00000578958 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
SLC9A3R1-203ENST00000578958 CYP19A1P11511 503 aaPredicted RBP23.44■■□□□ 1.34
SLC9A3R1-203ENST00000578958 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
SLC9A3R1-203ENST00000578958 TJP1Q07157 1748 aa23.44■■□□□ 1.34
SLC9A3R1-203ENST00000578958 A0A0G2JLW4 131 aa23.43■■□□□ 1.34
SLC9A3R1-203ENST00000578958 STARD3NLO95772 234 aa23.43■■□□□ 1.34
SLC9A3R1-203ENST00000578958 FKBP8Q14318 412 aa23.43■■□□□ 1.34
SLC9A3R1-203ENST00000578958 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
SLC9A3R1-203ENST00000578958 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
SLC9A3R1-203ENST00000578958 SOS1Q07889 1333 aaPredicted RBP23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 VIRMAQ69YN4 1812 aaKnown RBP23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 USPL1Q5W0Q7 1092 aa23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 RSPH6AQ9H0K4 717 aa23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 C4AP0C0L4 1744 aa23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 C10orf71Q711Q0 1435 aa23.41■■□□□ 1.34
SLC9A3R1-203ENST00000578958 CANXP27824 592 aaKnown RBP23.4■■□□□ 1.34
SLC9A3R1-203ENST00000578958 C1QTNF8P60827 252 aa23.4■■□□□ 1.34
SLC9A3R1-203ENST00000578958 RTF1Q92541 710 aaKnown RBP23.4■■□□□ 1.34
SLC9A3R1-203ENST00000578958 PHACTR3Q96KR7 559 aa23.4■■□□□ 1.34
SLC9A3R1-203ENST00000578958 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
SLC9A3R1-203ENST00000578958 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.34
SLC9A3R1-203ENST00000578958 PXDNLA1KZ92 1463 aa23.39■■□□□ 1.34
SLC9A3R1-203ENST00000578958 DPEP1P16444 411 aa23.39■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ZNF790Q6PG37 636 aa23.39■■□□□ 1.33
SLC9A3R1-203ENST00000578958 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
SLC9A3R1-203ENST00000578958 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms