RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 ZNF831Q5JPB2 1677 aa31.04■■■□□ 2.56
CDKN2A-212ENST00000578845 AMIGO3Q86WK7 504 aa31.04■■■□□ 2.56
CDKN2A-212ENST00000578845 MTHFSP49914 203 aa31.02■■■□□ 2.56
CDKN2A-212ENST00000578845 ITPK1Q13572 414 aa31.02■■■□□ 2.56
CDKN2A-212ENST00000578845 SSFA2P28290 1259 aa31.01■■■□□ 2.55
CDKN2A-212ENST00000578845 ATP6V1AP38606 617 aa31■■■□□ 2.55
CDKN2A-212ENST00000578845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.99■■■□□ 2.55
CDKN2A-212ENST00000578845 MSL1Q68DK7 614 aa30.99■■■□□ 2.55
CDKN2A-212ENST00000578845 C1orf141Q5JVX7 400 aa30.98■■■□□ 2.55
CDKN2A-212ENST00000578845 CC2D1BQ5T0F9 858 aaKnown RBP30.98■■■□□ 2.55
CDKN2A-212ENST00000578845 KLHL34Q8N239 644 aa30.97■■■□□ 2.55
CDKN2A-212ENST00000578845 CABP4P57796 275 aa30.96■■■□□ 2.55
CDKN2A-212ENST00000578845 NLGN2Q8NFZ4 835 aa30.96■■■□□ 2.55
CDKN2A-212ENST00000578845 SLC4A9Q96Q91 983 aa30.96■■■□□ 2.55
CDKN2A-212ENST00000578845 PHF14O94880 888 aa30.94■■■□□ 2.54
CDKN2A-212ENST00000578845 GNPATO15228 680 aa30.93■■■□□ 2.54
CDKN2A-212ENST00000578845 COL5A3P25940 1745 aaPredicted RBP30.93■■■□□ 2.54
CDKN2A-212ENST00000578845 AKAP4Q5JQC9 854 aa30.92■■■□□ 2.54
CDKN2A-212ENST00000578845 SMIM5Q71RC9 77 aa30.92■■■□□ 2.54
CDKN2A-212ENST00000578845 COL3A1P02461 1466 aaPredicted RBP30.92■■■□□ 2.54
CDKN2A-212ENST00000578845 SCN11AQ9UI33 1791 aa30.92■■■□□ 2.54
CDKN2A-212ENST00000578845 CHD4Q14839 1912 aa30.91■■■□□ 2.54
CDKN2A-212ENST00000578845 DIAPH1O60610 1272 aaKnown RBP30.91■■■□□ 2.54
CDKN2A-212ENST00000578845 GPR162Q16538 588 aa30.91■■■□□ 2.54
CDKN2A-212ENST00000578845 CD2APQ9Y5K6 639 aa30.91■■■□□ 2.54
CDKN2A-212ENST00000578845 CICQ96RK0 1608 aaPredicted RBP30.89■■■□□ 2.54
CDKN2A-212ENST00000578845 RC3H1Q5TC82 1133 aaKnown RBP30.89■■■□□ 2.54
CDKN2A-212ENST00000578845 RBM42Q9BTD8 480 aaKnown RBP30.89■■■□□ 2.54
CDKN2A-212ENST00000578845 CNTNAP4Q9C0A0 1308 aa30.89■■■□□ 2.54
CDKN2A-212ENST00000578845 NFATC2IPQ8NCF5 419 aa30.88■■■□□ 2.53
CDKN2A-212ENST00000578845 MRC1P22897 1456 aa30.88■■■□□ 2.53
CDKN2A-212ENST00000578845 HMOX1P09601 288 aa30.87■■■□□ 2.53
CDKN2A-212ENST00000578845 ADAMTS7Q9UKP4 1686 aa30.85■■■□□ 2.53
CDKN2A-212ENST00000578845 RTCBQ9Y3I0 505 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-212ENST00000578845 ADRA2BP18089 450 aa30.84■■■□□ 2.53
CDKN2A-212ENST00000578845 ZNF784Q8NCA9 323 aaPredicted RBP30.82■■■□□ 2.52
CDKN2A-212ENST00000578845 SLC52A2Q9HAB3 445 aa30.82■■■□□ 2.52
CDKN2A-212ENST00000578845 PTCD1O75127 700 aaKnown RBP30.81■■■□□ 2.52
CDKN2A-212ENST00000578845 RPS6KA4O75676 772 aa30.81■■■□□ 2.52
CDKN2A-212ENST00000578845 MTHFSDQ2M296 383 aaKnown RBP30.81■■■□□ 2.52
CDKN2A-212ENST00000578845 TRAPPC3LQ5T215 181 aa30.81■■■□□ 2.52
CDKN2A-212ENST00000578845 TJP1Q07157 1748 aa30.81■■■□□ 2.52
CDKN2A-212ENST00000578845 YBX3P16989 372 aaKnown RBP eCLIP30.8■■■□□ 2.52
CDKN2A-212ENST00000578845 PELP1Q8IZL8 1130 aaKnown RBP30.8■■■□□ 2.52
CDKN2A-212ENST00000578845 LGR6Q9HBX8 967 aa30.8■■■□□ 2.52
CDKN2A-212ENST00000578845 MYH14Q7Z406 1995 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-212ENST00000578845 RNMTO43148 476 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-212ENST00000578845 GRIN3BO60391 1043 aa30.78■■■□□ 2.52
CDKN2A-212ENST00000578845 ARHGEF1Q92888 912 aaKnown RBP30.77■■■□□ 2.52
CDKN2A-212ENST00000578845 VIRMAQ69YN4 1812 aaKnown RBP30.75■■■□□ 2.51
CDKN2A-212ENST00000578845 CRKLP46109 303 aaKnown RBP30.75■■■□□ 2.51
CDKN2A-212ENST00000578845 NLGN1Q8N2Q7 840 aa30.75■■■□□ 2.51
CDKN2A-212ENST00000578845 C4AP0C0L4 1744 aa30.75■■■□□ 2.51
CDKN2A-212ENST00000578845 MMP10P09238 476 aa30.74■■■□□ 2.51
CDKN2A-212ENST00000578845 CNGB1Q14028 1251 aaPredicted RBP30.74■■■□□ 2.51
CDKN2A-212ENST00000578845 KCPQ6ZWJ8 1503 aa30.73■■■□□ 2.51
CDKN2A-212ENST00000578845 U2SURPO15042 1029 aaKnown RBP30.72■■■□□ 2.51
CDKN2A-212ENST00000578845 GYS1P13807 737 aa30.72■■■□□ 2.51
CDKN2A-212ENST00000578845 RFC4P35249 363 aa30.71■■■□□ 2.51
CDKN2A-212ENST00000578845 KIF13BQ9NQT8 1826 aa30.7■■■□□ 2.51
CDKN2A-212ENST00000578845 INTS5Q6P9B9 1019 aaKnown RBP30.69■■■□□ 2.5
CDKN2A-212ENST00000578845 GAS2L2Q8NHY3 880 aa30.69■■■□□ 2.5
CDKN2A-212ENST00000578845 CFAP53Q96M91 514 aa30.69■■■□□ 2.5
CDKN2A-212ENST00000578845 UBR2Q8IWV8 1755 aa30.67■■■□□ 2.5
CDKN2A-212ENST00000578845 C10orf71Q711Q0 1435 aa30.67■■■□□ 2.5
CDKN2A-212ENST00000578845 SLC39A6Q13433 755 aa30.67■■■□□ 2.5
CDKN2A-212ENST00000578845 DNAJC10Q8IXB1 793 aa30.67■■■□□ 2.5
CDKN2A-212ENST00000578845 VSIG10Q8N0Z9 540 aa30.66■■■□□ 2.5
CDKN2A-212ENST00000578845 USP42Q9H9J4 1324 aaKnown RBP30.66■■■□□ 2.5
CDKN2A-212ENST00000578845 KIAA1551Q9HCM1 1747 aa30.65■■■□□ 2.5
CDKN2A-212ENST00000578845 PPP2R1AP30153 589 aa30.65■■■□□ 2.5
CDKN2A-212ENST00000578845 CCDC87Q9NVE4 849 aa30.65■■■□□ 2.5
CDKN2A-212ENST00000578845 PXDNLA1KZ92 1463 aa30.64■■■□□ 2.5
CDKN2A-212ENST00000578845 GNAT3A8MTJ3 354 aa30.64■■■□□ 2.5
CDKN2A-212ENST00000578845 CYP19A1P11511 503 aaPredicted RBP30.64■■■□□ 2.5
CDKN2A-212ENST00000578845 RSPH6AQ9H0K4 717 aa30.64■■■□□ 2.5
CDKN2A-212ENST00000578845 IL17REQ8NFR9 667 aa30.62■■■□□ 2.49
CDKN2A-212ENST00000578845 SOS1Q07889 1333 aaPredicted RBP30.62■■■□□ 2.49
CDKN2A-212ENST00000578845 TGFB2P61812 414 aa30.61■■■□□ 2.49
CDKN2A-212ENST00000578845 SRP68Q9UHB9 627 aaKnown RBP30.61■■■□□ 2.49
CDKN2A-212ENST00000578845 NUDCQ9Y266 331 aa30.61■■■□□ 2.49
CDKN2A-212ENST00000578845 CEMIPQ8WUJ3 1361 aa30.61■■■□□ 2.49
CDKN2A-212ENST00000578845 SIPA1L3O60292 1781 aaPredicted RBP30.61■■■□□ 2.49
CDKN2A-212ENST00000578845 PRKAR2BP31323 418 aa30.6■■■□□ 2.49
CDKN2A-212ENST00000578845 PARP3Q9Y6F1 533 aa30.6■■■□□ 2.49
CDKN2A-212ENST00000578845 PHACTR3Q96KR7 559 aa30.59■■■□□ 2.49
CDKN2A-212ENST00000578845 TEFQ10587 303 aa30.58■■■□□ 2.49
CDKN2A-212ENST00000578845 FKBP8Q14318 412 aa30.58■■■□□ 2.49
CDKN2A-212ENST00000578845 TTC5Q8N0Z6 440 aa30.57■■■□□ 2.48
CDKN2A-212ENST00000578845 ZBTB1Q9Y2K1 713 aa30.56■■■□□ 2.48
CDKN2A-212ENST00000578845 ADCY9O60503 1353 aa30.55■■■□□ 2.48
CDKN2A-212ENST00000578845 ZNF790Q6PG37 636 aa30.55■■■□□ 2.48
CDKN2A-212ENST00000578845 COL15A1P39059 1388 aa30.54■■■□□ 2.48
CDKN2A-212ENST00000578845 FCHSD2O94868 740 aa30.54■■■□□ 2.48
CDKN2A-212ENST00000578845 DDR1Q08345 913 aa30.54■■■□□ 2.48
CDKN2A-212ENST00000578845 U2AF1L5P0DN76 240 aaPredicted RBP30.53■■■□□ 2.48
CDKN2A-212ENST00000578845 U2AF1Q01081 240 aaKnown RBP eCLIP30.53■■■□□ 2.48
CDKN2A-212ENST00000578845 N4BP2Q86UW6 1770 aaPredicted RBP30.53■■■□□ 2.48
CDKN2A-212ENST00000578845 HEG1Q9ULI3 1381 aa30.53■■■□□ 2.48
CDKN2A-212ENST00000578845 ZPR1O75312 459 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms