RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
CCDC58P1-201ENST00000578567 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
CCDC58P1-201ENST00000578567 ABCC6O95255 1503 aa11.3□□□□□ -0.6
CCDC58P1-201ENST00000578567 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 SPATA31E1Q6ZUB1 1445 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 LBX1P52954 281 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 ACEP12821 1306 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
CCDC58P1-201ENST00000578567 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
CCDC58P1-201ENST00000578567 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
CCDC58P1-201ENST00000578567 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
CCDC58P1-201ENST00000578567 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
CCDC58P1-201ENST00000578567 LY75O60449 1722 aa11.28□□□□□ -0.6
CCDC58P1-201ENST00000578567 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 MKRN1Q9UHC7 482 aaKnown RBP11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
CCDC58P1-201ENST00000578567 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
CCDC58P1-201ENST00000578567 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
CCDC58P1-201ENST00000578567 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
CCDC58P1-201ENST00000578567 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
CCDC58P1-201ENST00000578567 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
CCDC58P1-201ENST00000578567 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
CCDC58P1-201ENST00000578567 CCDC7Q96M83 1385 aa11.25□□□□□ -0.61
CCDC58P1-201ENST00000578567 SLIT3O75094 1523 aa11.25□□□□□ -0.61
CCDC58P1-201ENST00000578567 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
CCDC58P1-201ENST00000578567 WBP1LQ9NX94 342 aa11.24□□□□□ -0.61
CCDC58P1-201ENST00000578567 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
CCDC58P1-201ENST00000578567 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
CCDC58P1-201ENST00000578567 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
CCDC58P1-201ENST00000578567 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
CCDC58P1-201ENST00000578567 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
CCDC58P1-201ENST00000578567 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
CCDC58P1-201ENST00000578567 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
CCDC58P1-201ENST00000578567 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
CCDC58P1-201ENST00000578567 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 ADGRB1O14514 1584 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 CPSF1Q10570 1443 aaKnown RBP11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 NSD2O96028 1365 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 ERBB3P21860 1342 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
CCDC58P1-201ENST00000578567 KIF13BQ9NQT8 1826 aa11.21□□□□□ -0.62
CCDC58P1-201ENST00000578567 PDE4DIPQ5VU43 2346 aa11.2□□□□□ -0.62
CCDC58P1-201ENST00000578567 SNPHO15079 494 aa11.2□□□□□ -0.62
CCDC58P1-201ENST00000578567 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
CCDC58P1-201ENST00000578567 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 ST18O60284 1047 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 IL2RBP14784 551 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 NLRP6P59044 892 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 TGFB2P61812 414 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
CCDC58P1-201ENST00000578567 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
CCDC58P1-201ENST00000578567 ITGAEP38570 1179 aa11.18□□□□□ -0.62
CCDC58P1-201ENST00000578567 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
CCDC58P1-201ENST00000578567 VEGFBP49765 207 aa11.18□□□□□ -0.62
CCDC58P1-201ENST00000578567 AMIGO3Q86WK7 504 aa11.18□□□□□ -0.62
CCDC58P1-201ENST00000578567 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 FCHSD2O94868 740 aa11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 C5P01031 1676 aa11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 SBF1O95248 1867 aa11.17□□□□□ -0.62
CCDC58P1-201ENST00000578567 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
CCDC58P1-201ENST00000578567 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
CCDC58P1-201ENST00000578567 TOGARAM1Q9Y4F4 1720 aa11.16□□□□□ -0.62
CCDC58P1-201ENST00000578567 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
CCDC58P1-201ENST00000578567 POTECB2RU33 542 aa11.15□□□□□ -0.62
CCDC58P1-201ENST00000578567 CFAP44Q96MT7 982 aa11.15□□□□□ -0.62
CCDC58P1-201ENST00000578567 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 DPEP1P16444 411 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 KCNA3P22001 575 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 DOT1LQ8TEK3 1739 aa11.14□□□□□ -0.63
CCDC58P1-201ENST00000578567 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
CCDC58P1-201ENST00000578567 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
CCDC58P1-201ENST00000578567 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
CCDC58P1-201ENST00000578567 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
CCDC58P1-201ENST00000578567 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
CCDC58P1-201ENST00000578567 NLRP2Q9NX02 1062 aa11.11□□□□□ -0.63
CCDC58P1-201ENST00000578567 USP47Q96K76 1375 aa11.11□□□□□ -0.63
CCDC58P1-201ENST00000578567 C4BP0C0L5 1744 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 PHF14O94880 888 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 MMP10P09238 476 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 MCOLN1Q9GZU1 580 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
CCDC58P1-201ENST00000578567 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms