RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 NRAPQ86VF7 1730 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 DZIP1LQ8IYY4 767 aaKnown RBP29.28■■■□□ 2.28
LIMD2-205ENST00000578402 ZCRB1Q8TBF4 217 aaKnown RBP29.28■■■□□ 2.28
LIMD2-205ENST00000578402 PANK1Q8TE04 598 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 DCAF5Q96JK2 942 aa29.28■■■□□ 2.28
LIMD2-205ENST00000578402 NWD2Q9ULI1 1742 aa29.27■■■□□ 2.28
LIMD2-205ENST00000578402 CYP27B1O15528 508 aa29.27■■■□□ 2.28
LIMD2-205ENST00000578402 FTSJ3Q8IY81 847 aaKnown RBP29.26■■■□□ 2.27
LIMD2-205ENST00000578402 BTBD11A6QL63 1104 aa29.25■■■□□ 2.27
LIMD2-205ENST00000578402 HOXB7P09629 217 aa29.25■■■□□ 2.27
LIMD2-205ENST00000578402 RLBP1P12271 317 aa29.25■■■□□ 2.27
LIMD2-205ENST00000578402 CHMP4AQ9BY43 222 aa29.24■■■□□ 2.27
LIMD2-205ENST00000578402 COG6Q9Y2V7 657 aa29.24■■■□□ 2.27
LIMD2-205ENST00000578402 SHANK3Q9BYB0 1731 aa29.24■■■□□ 2.27
LIMD2-205ENST00000578402 DISP2A7MBM2 1401 aa29.23■■■□□ 2.27
LIMD2-205ENST00000578402 ADAMTS2O95450 1211 aa29.23■■■□□ 2.27
LIMD2-205ENST00000578402 EIF4A1P60842 406 aaKnown RBP29.22■■■□□ 2.27
LIMD2-205ENST00000578402 SLC52A2Q9HAB3 445 aa29.22■■■□□ 2.27
LIMD2-205ENST00000578402 SLIT2O94813 1529 aa29.22■■■□□ 2.27
LIMD2-205ENST00000578402 MVPQ14764 893 aaKnown RBP29.21■■■□□ 2.27
LIMD2-205ENST00000578402 TNNQ9UQP3 1299 aa29.21■■■□□ 2.27
LIMD2-205ENST00000578402 NKX1-1Q15270 411 aaPredicted RBP29.2■■■□□ 2.27
LIMD2-205ENST00000578402 CLUAP1Q96AJ1 413 aa29.2■■■□□ 2.27
LIMD2-205ENST00000578402 WNK3Q9BYP7 1800 aa29.2■■■□□ 2.26
LIMD2-205ENST00000578402 API5Q9BZZ5 524 aaKnown RBP29.2■■■□□ 2.26
LIMD2-205ENST00000578402 SPATA31A6Q5VVP1 1343 aa29.19■■■□□ 2.26
LIMD2-205ENST00000578402 NUTM2BA6NNL0 878 aaPredicted RBP29.19■■■□□ 2.26
LIMD2-205ENST00000578402 NUTM2EB1AL46 878 aaPredicted RBP29.19■■■□□ 2.26
LIMD2-205ENST00000578402 CCDC30Q5VVM6 783 aa29.19■■■□□ 2.26
LIMD2-205ENST00000578402 NUTM2AQ8IVF1 878 aaPredicted RBP29.19■■■□□ 2.26
LIMD2-205ENST00000578402 HEG1Q9ULI3 1381 aa29.17■■■□□ 2.26
LIMD2-205ENST00000578402 CACNA1FO60840 1977 aa29.17■■■□□ 2.26
LIMD2-205ENST00000578402 PTPRCP08575 1304 aa29.17■■■□□ 2.26
LIMD2-205ENST00000578402 THRAP3Q9Y2W1 955 aaKnown RBP29.17■■■□□ 2.26
LIMD2-205ENST00000578402 DDX19BQ9UMR2 479 aa29.16■■■□□ 2.26
LIMD2-205ENST00000578402 ABCC4O15439 1325 aa29.16■■■□□ 2.26
LIMD2-205ENST00000578402 TCERG1O14776 1098 aaKnown RBP29.15■■■□□ 2.26
LIMD2-205ENST00000578402 CDCA7Q9BWT1 371 aaPredicted RBP29.15■■■□□ 2.26
LIMD2-205ENST00000578402 STK31Q9BXU1 1019 aa29.15■■■□□ 2.26
LIMD2-205ENST00000578402 USP35Q9P2H5 1018 aa29.15■■■□□ 2.26
LIMD2-205ENST00000578402 ERVV-2B6SEH9 535 aa29.14■■■□□ 2.25
LIMD2-205ENST00000578402 TMEM57Q8N5G2 664 aa29.13■■■□□ 2.25
LIMD2-205ENST00000578402 SPATA31A1Q5TZJ5 1347 aa29.12■■■□□ 2.25
LIMD2-205ENST00000578402 KCNQ3O43525 872 aa29.12■■■□□ 2.25
LIMD2-205ENST00000578402 SLC4A2P04920 1241 aa29.12■■■□□ 2.25
LIMD2-205ENST00000578402 NFATC2IPQ8NCF5 419 aa29.12■■■□□ 2.25
LIMD2-205ENST00000578402 ZNF790Q6PG37 636 aa29.11■■■□□ 2.25
LIMD2-205ENST00000578402 CHMP4BQ9H444 224 aaKnown RBP29.11■■■□□ 2.25
LIMD2-205ENST00000578402 CABP4P57796 275 aa29.1■■■□□ 2.25
LIMD2-205ENST00000578402 HDGFL1Q5TGJ6 251 aa29.1■■■□□ 2.25
LIMD2-205ENST00000578402 ITPRIPQ8IWB1 547 aa29.1■■■□□ 2.25
LIMD2-205ENST00000578402 RGS12O14924 1447 aa29.09■■■□□ 2.25
LIMD2-205ENST00000578402 TNS2Q63HR2 1409 aa29.08■■■□□ 2.25
LIMD2-205ENST00000578402 SPATA31A5Q5VU36 1347 aa29.08■■■□□ 2.25
LIMD2-205ENST00000578402 SPATA31A7Q8IWB4 1347 aa29.08■■■□□ 2.25
LIMD2-205ENST00000578402 GIGYF1O75420 1035 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-205ENST00000578402 DDX54Q8TDD1 881 aaKnown RBP29.08■■■□□ 2.25
LIMD2-205ENST00000578402 LRP6O75581 1613 aa29.07■■■□□ 2.24
LIMD2-205ENST00000578402 KDM2BQ8NHM5 1336 aa29.07■■■□□ 2.24
LIMD2-205ENST00000578402 CENPQQ7L2Z9 268 aaPredicted RBP29.06■■■□□ 2.24
LIMD2-205ENST00000578402 UNC5CLQ8IV45 518 aa29.06■■■□□ 2.24
LIMD2-205ENST00000578402 BARGINQ6ZT62 677 aa29.04■■■□□ 2.24
LIMD2-205ENST00000578402 PAPPAQ13219 1627 aa29.04■■■□□ 2.24
LIMD2-205ENST00000578402 EXOC5O00471 708 aa29.04■■■□□ 2.24
LIMD2-205ENST00000578402 INTS3Q68E01 1043 aaKnown RBP29.04■■■□□ 2.24
LIMD2-205ENST00000578402 TTC5Q8N0Z6 440 aa29.04■■■□□ 2.24
LIMD2-205ENST00000578402 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
LIMD2-205ENST00000578402 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
LIMD2-205ENST00000578402 TOGARAM1Q9Y4F4 1720 aa29.03■■■□□ 2.24
LIMD2-205ENST00000578402 BCL9LQ86UU0 1499 aa29.03■■■□□ 2.24
LIMD2-205ENST00000578402 FLIIQ13045 1269 aa29.02■■■□□ 2.24
LIMD2-205ENST00000578402 NGLY1Q96IV0 654 aa29.02■■■□□ 2.24
LIMD2-205ENST00000578402 RGS17Q9UGC6 210 aaPredicted RBP29.02■■■□□ 2.24
LIMD2-205ENST00000578402 SLC39A6Q13433 755 aa29.01■■■□□ 2.23
LIMD2-205ENST00000578402 C8orf37Q96NL8 207 aa29.01■■■□□ 2.23
LIMD2-205ENST00000578402 ZBTB40Q9NUA8 1239 aa29.01■■■□□ 2.23
LIMD2-205ENST00000578402 VPS72Q15906 364 aa29■■■□□ 2.23
LIMD2-205ENST00000578402 G2E3Q7L622 706 aa29■■■□□ 2.23
LIMD2-205ENST00000578402 FMNL2Q96PY5 1086 aa29■■■□□ 2.23
LIMD2-205ENST00000578402 UBR2Q8IWV8 1755 aa29■■■□□ 2.23
LIMD2-205ENST00000578402 EIF2S2P20042 333 aaKnown RBP28.99■■■□□ 2.23
LIMD2-205ENST00000578402 DBF4Q9UBU7 674 aaPredicted RBP28.99■■■□□ 2.23
LIMD2-205ENST00000578402 NECTIN2Q92692 538 aa28.99■■■□□ 2.23
LIMD2-205ENST00000578402 PXDNLA1KZ92 1463 aa28.98■■■□□ 2.23
LIMD2-205ENST00000578402 ZBTB7BO15156 539 aaPredicted RBP28.98■■■□□ 2.23
LIMD2-205ENST00000578402 ZNF496Q96IT1 587 aaPredicted RBP28.98■■■□□ 2.23
LIMD2-205ENST00000578402 C5P01031 1676 aa28.98■■■□□ 2.23
LIMD2-205ENST00000578402 GLI3P10071 1580 aa28.97■■■□□ 2.23
LIMD2-205ENST00000578402 SNRPA1P09661 255 aaKnown RBP28.97■■■□□ 2.23
LIMD2-205ENST00000578402 PCDHB15Q9Y5E8 787 aa28.97■■■□□ 2.23
LIMD2-205ENST00000578402 N4BP2Q86UW6 1770 aaPredicted RBP28.96■■■□□ 2.23
LIMD2-205ENST00000578402 CHPF2Q9P2E5 772 aa28.96■■■□□ 2.23
LIMD2-205ENST00000578402 CCT4P50991 539 aaKnown RBP28.95■■■□□ 2.23
LIMD2-205ENST00000578402 FKBP5Q13451 457 aaPredicted RBP28.95■■■□□ 2.23
LIMD2-205ENST00000578402 DDB1Q16531 1140 aa28.95■■■□□ 2.23
LIMD2-205ENST00000578402 CCDC9Q9Y3X0 531 aaKnown RBP28.95■■■□□ 2.23
LIMD2-205ENST00000578402 LAMB4A4D0S4 1761 aa28.95■■■□□ 2.23
LIMD2-205ENST00000578402 TMOD3Q9NYL9 352 aa28.94■■■□□ 2.22
LIMD2-205ENST00000578402 KCPQ6ZWJ8 1503 aa28.94■■■□□ 2.22
LIMD2-205ENST00000578402 RWDD1Q9H446 243 aaPredicted RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms