RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
SMARCD2-207ENST00000578234 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
SMARCD2-207ENST00000578234 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
SMARCD2-207ENST00000578234 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
SMARCD2-207ENST00000578234 ITPK1Q13572 414 aa17.21■□□□□ 0.35
SMARCD2-207ENST00000578234 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-207ENST00000578234 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
SMARCD2-207ENST00000578234 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-207ENST00000578234 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
SMARCD2-207ENST00000578234 GNPATO15228 680 aa17.19■□□□□ 0.34
SMARCD2-207ENST00000578234 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
SMARCD2-207ENST00000578234 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
SMARCD2-207ENST00000578234 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-207ENST00000578234 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
SMARCD2-207ENST00000578234 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-207ENST00000578234 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
SMARCD2-207ENST00000578234 KDRP35968 1356 aa17.15■□□□□ 0.34
SMARCD2-207ENST00000578234 CABP4P57796 275 aa17.15■□□□□ 0.34
SMARCD2-207ENST00000578234 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-207ENST00000578234 SLC4A9Q96Q91 983 aa17.15■□□□□ 0.34
SMARCD2-207ENST00000578234 GPBP1L1Q9HC44 474 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-207ENST00000578234 MTHFSP49914 203 aa17.14■□□□□ 0.33
SMARCD2-207ENST00000578234 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
SMARCD2-207ENST00000578234 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SMARCD2-207ENST00000578234 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
SMARCD2-207ENST00000578234 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
SMARCD2-207ENST00000578234 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
SMARCD2-207ENST00000578234 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
SMARCD2-207ENST00000578234 ADRA2BP18089 450 aa17.12■□□□□ 0.33
SMARCD2-207ENST00000578234 IL13P35225 146 aa17.12■□□□□ 0.33
SMARCD2-207ENST00000578234 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
SMARCD2-207ENST00000578234 CNTNAP4Q9C0A0 1308 aa17.12■□□□□ 0.33
SMARCD2-207ENST00000578234 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
SMARCD2-207ENST00000578234 RPS6KA4O75676 772 aa17.11■□□□□ 0.33
SMARCD2-207ENST00000578234 MMP10P09238 476 aa17.11■□□□□ 0.33
SMARCD2-207ENST00000578234 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
SMARCD2-207ENST00000578234 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
SMARCD2-207ENST00000578234 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
SMARCD2-207ENST00000578234 COL5A3P25940 1745 aaPredicted RBP17.09■□□□□ 0.33
SMARCD2-207ENST00000578234 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
SMARCD2-207ENST00000578234 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
SMARCD2-207ENST00000578234 RFC4P35249 363 aa17.08■□□□□ 0.32
SMARCD2-207ENST00000578234 ADCY9O60503 1353 aa17.07■□□□□ 0.32
SMARCD2-207ENST00000578234 GYS1P13807 737 aa17.07■□□□□ 0.32
SMARCD2-207ENST00000578234 TGFB2P61812 414 aa17.07■□□□□ 0.32
SMARCD2-207ENST00000578234 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
SMARCD2-207ENST00000578234 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
SMARCD2-207ENST00000578234 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
SMARCD2-207ENST00000578234 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
SMARCD2-207ENST00000578234 BCS1LQ9Y276 419 aa17.06■□□□□ 0.32
SMARCD2-207ENST00000578234 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
SMARCD2-207ENST00000578234 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
SMARCD2-207ENST00000578234 ARHGAP27Q6ZUM4 889 aa17.05■□□□□ 0.32
SMARCD2-207ENST00000578234 SCN11AQ9UI33 1791 aa17.05■□□□□ 0.32
SMARCD2-207ENST00000578234 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
SMARCD2-207ENST00000578234 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
SMARCD2-207ENST00000578234 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
SMARCD2-207ENST00000578234 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SMARCD2-207ENST00000578234 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
SMARCD2-207ENST00000578234 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
SMARCD2-207ENST00000578234 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
SMARCD2-207ENST00000578234 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
SMARCD2-207ENST00000578234 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
SMARCD2-207ENST00000578234 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 FCHSD2O94868 740 aa17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 HMOX1P09601 288 aa17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 INTS5Q6P9B9 1019 aaKnown RBP17.01■□□□□ 0.31
SMARCD2-207ENST00000578234 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
SMARCD2-207ENST00000578234 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
SMARCD2-207ENST00000578234 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
SMARCD2-207ENST00000578234 TJP1Q07157 1748 aa17■□□□□ 0.31
SMARCD2-207ENST00000578234 DPEP1P16444 411 aa16.99■□□□□ 0.31
SMARCD2-207ENST00000578234 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
SMARCD2-207ENST00000578234 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
SMARCD2-207ENST00000578234 FKBP8Q14318 412 aa16.98■□□□□ 0.31
SMARCD2-207ENST00000578234 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
SMARCD2-207ENST00000578234 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
SMARCD2-207ENST00000578234 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
SMARCD2-207ENST00000578234 MRC1P22897 1456 aa16.98■□□□□ 0.31
SMARCD2-207ENST00000578234 CYP19A1P11511 503 aaPredicted RBP16.97■□□□□ 0.31
SMARCD2-207ENST00000578234 KCNA3P22001 575 aa16.97■□□□□ 0.31
SMARCD2-207ENST00000578234 HSPA6P17066 643 aa16.96■□□□□ 0.31
SMARCD2-207ENST00000578234 TM4SF1P30408 202 aa16.96■□□□□ 0.31
SMARCD2-207ENST00000578234 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
SMARCD2-207ENST00000578234 ADAMTS7Q9UKP4 1686 aa16.96■□□□□ 0.31
SMARCD2-207ENST00000578234 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
SMARCD2-207ENST00000578234 BRCA1P38398 1863 aaKnown RBP16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 ZPR1O75312 459 aa16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 DDR1Q08345 913 aa16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 SOS1Q07889 1333 aaPredicted RBP16.95■□□□□ 0.3
SMARCD2-207ENST00000578234 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
SMARCD2-207ENST00000578234 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
SMARCD2-207ENST00000578234 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
SMARCD2-207ENST00000578234 KIF3CO14782 793 aa16.93■□□□□ 0.3
SMARCD2-207ENST00000578234 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
SMARCD2-207ENST00000578234 NARFQ9UHQ1 456 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms