RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.09
VAPA-204ENST00000577901 EIF4A2Q14240 407 aaKnown RBP21.89■■□□□ 1.09
VAPA-204ENST00000577901 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
VAPA-204ENST00000577901 ITPK1Q13572 414 aa21.87■■□□□ 1.09
VAPA-204ENST00000577901 GNPATO15228 680 aa21.86■■□□□ 1.09
VAPA-204ENST00000577901 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
VAPA-204ENST00000577901 ATP10DQ9P241 1426 aa21.86■■□□□ 1.09
VAPA-204ENST00000577901 IGSF1Q8N6C5 1336 aa21.84■■□□□ 1.09
VAPA-204ENST00000577901 KNSTRNQ9Y448 316 aa21.84■■□□□ 1.09
VAPA-204ENST00000577901 PLEKHG2Q9H7P9 1386 aa21.84■■□□□ 1.09
VAPA-204ENST00000577901 WWC3Q9ULE0 1092 aa21.82■■□□□ 1.08
VAPA-204ENST00000577901 ERVV-2B6SEH9 535 aa21.8■■□□□ 1.08
VAPA-204ENST00000577901 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
VAPA-204ENST00000577901 CEP350Q5VT06 3117 aa21.8■■□□□ 1.08
VAPA-204ENST00000577901 ADCY9O60503 1353 aa21.79■■□□□ 1.08
VAPA-204ENST00000577901 KDRP35968 1356 aa21.79■■□□□ 1.08
VAPA-204ENST00000577901 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
VAPA-204ENST00000577901 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
VAPA-204ENST00000577901 MMP10P09238 476 aa21.78■■□□□ 1.08
VAPA-204ENST00000577901 PLEKHO1Q53GL0 409 aaPredicted RBP21.78■■□□□ 1.08
VAPA-204ENST00000577901 SLC4A9Q96Q91 983 aa21.78■■□□□ 1.08
VAPA-204ENST00000577901 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
VAPA-204ENST00000577901 RTCBQ9Y3I0 505 aaKnown RBP21.78■■□□□ 1.08
VAPA-204ENST00000577901 TRAPPC3LQ5T215 181 aa21.77■■□□□ 1.08
VAPA-204ENST00000577901 ZNF526Q8TF50 670 aaPredicted RBP21.77■■□□□ 1.08
VAPA-204ENST00000577901 MORC1Q86VD1 984 aa21.76■■□□□ 1.07
VAPA-204ENST00000577901 AMOTQ4VCS5 1084 aa21.75■■□□□ 1.07
VAPA-204ENST00000577901 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
VAPA-204ENST00000577901 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
VAPA-204ENST00000577901 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
VAPA-204ENST00000577901 CABP4P57796 275 aa21.74■■□□□ 1.07
VAPA-204ENST00000577901 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
VAPA-204ENST00000577901 NLGN1Q8N2Q7 840 aa21.74■■□□□ 1.07
VAPA-204ENST00000577901 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
VAPA-204ENST00000577901 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
VAPA-204ENST00000577901 CNTNAP4Q9C0A0 1308 aa21.73■■□□□ 1.07
VAPA-204ENST00000577901 PXDNLA1KZ92 1463 aa21.72■■□□□ 1.07
VAPA-204ENST00000577901 PER1O15534 1290 aaPredicted RBP21.72■■□□□ 1.07
VAPA-204ENST00000577901 MTHFSP49914 203 aa21.72■■□□□ 1.07
VAPA-204ENST00000577901 AMER1Q5JTC6 1135 aaPredicted RBP21.72■■□□□ 1.07
VAPA-204ENST00000577901 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
VAPA-204ENST00000577901 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
VAPA-204ENST00000577901 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
VAPA-204ENST00000577901 RFC4P35249 363 aa21.71■■□□□ 1.07
VAPA-204ENST00000577901 TGFB2P61812 414 aa21.71■■□□□ 1.07
VAPA-204ENST00000577901 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
VAPA-204ENST00000577901 COL5A3P25940 1745 aaPredicted RBP21.7■■□□□ 1.06
VAPA-204ENST00000577901 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
VAPA-204ENST00000577901 GYS1P13807 737 aa21.69■■□□□ 1.06
VAPA-204ENST00000577901 SULT6B1Q6IMI4 303 aa21.69■■□□□ 1.06
VAPA-204ENST00000577901 CCDC87Q9NVE4 849 aa21.69■■□□□ 1.06
VAPA-204ENST00000577901 C10orf71Q711Q0 1435 aa21.69■■□□□ 1.06
VAPA-204ENST00000577901 A0A0G2JLW4 131 aa21.68■■□□□ 1.06
VAPA-204ENST00000577901 PTCD1O75127 700 aaKnown RBP21.68■■□□□ 1.06
VAPA-204ENST00000577901 NFATC2IPQ8NCF5 419 aa21.68■■□□□ 1.06
VAPA-204ENST00000577901 KIAA1551Q9HCM1 1747 aa21.68■■□□□ 1.06
VAPA-204ENST00000577901 BCS1LQ9Y276 419 aa21.67■■□□□ 1.06
VAPA-204ENST00000577901 PARP3Q9Y6F1 533 aa21.67■■□□□ 1.06
VAPA-204ENST00000577901 C4AP0C0L4 1744 aa21.66■■□□□ 1.06
VAPA-204ENST00000577901 CC2D1BQ5T0F9 858 aaKnown RBP21.66■■□□□ 1.06
VAPA-204ENST00000577901 N4BP2Q86UW6 1770 aaPredicted RBP21.66■■□□□ 1.06
VAPA-204ENST00000577901 HSPA6P17066 643 aa21.65■■□□□ 1.06
VAPA-204ENST00000577901 IL13P35225 146 aa21.65■■□□□ 1.06
VAPA-204ENST00000577901 DPEP1P16444 411 aa21.64■■□□□ 1.05
VAPA-204ENST00000577901 CRKLP46109 303 aaKnown RBP21.64■■□□□ 1.05
VAPA-204ENST00000577901 KIF3CO14782 793 aa21.63■■□□□ 1.05
VAPA-204ENST00000577901 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
VAPA-204ENST00000577901 NPC1L1Q9UHC9 1359 aa21.62■■□□□ 1.05
VAPA-204ENST00000577901 FCHSD2O94868 740 aa21.62■■□□□ 1.05
VAPA-204ENST00000577901 SRP68Q9UHB9 627 aaKnown RBP21.62■■□□□ 1.05
VAPA-204ENST00000577901 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
VAPA-204ENST00000577901 USP42Q9H9J4 1324 aaKnown RBP21.6■■□□□ 1.05
VAPA-204ENST00000577901 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
VAPA-204ENST00000577901 FKBP8Q14318 412 aa21.6■■□□□ 1.05
VAPA-204ENST00000577901 AKAP4Q5JQC9 854 aa21.6■■□□□ 1.05
VAPA-204ENST00000577901 TJP1Q07157 1748 aa21.6■■□□□ 1.05
VAPA-204ENST00000577901 KCNA3P22001 575 aa21.59■■□□□ 1.05
VAPA-204ENST00000577901 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
VAPA-204ENST00000577901 SCN11AQ9UI33 1791 aa21.57■■□□□ 1.04
VAPA-204ENST00000577901 DDR1Q08345 913 aa21.57■■□□□ 1.04
VAPA-204ENST00000577901 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
VAPA-204ENST00000577901 PIM2Q9P1W9 311 aa21.57■■□□□ 1.04
VAPA-204ENST00000577901 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
VAPA-204ENST00000577901 BRCA1P38398 1863 aaKnown RBP21.56■■□□□ 1.04
VAPA-204ENST00000577901 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
VAPA-204ENST00000577901 HMOX1P09601 288 aa21.54■■□□□ 1.04
VAPA-204ENST00000577901 DALRD3Q5D0E6 543 aaKnown RBP21.54■■□□□ 1.04
VAPA-204ENST00000577901 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
VAPA-204ENST00000577901 ZPR1O75312 459 aa21.53■■□□□ 1.04
VAPA-204ENST00000577901 TOMM70O94826 608 aa21.53■■□□□ 1.04
VAPA-204ENST00000577901 TM4SF1P30408 202 aa21.53■■□□□ 1.04
VAPA-204ENST00000577901 MRC1P22897 1456 aa21.52■■□□□ 1.04
VAPA-204ENST00000577901 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.04
VAPA-204ENST00000577901 RNMTO43148 476 aaKnown RBP21.52■■□□□ 1.04
VAPA-204ENST00000577901 CYP19A1P11511 503 aaPredicted RBP21.52■■□□□ 1.04
VAPA-204ENST00000577901 SLC39A6Q13433 755 aa21.52■■□□□ 1.04
VAPA-204ENST00000577901 C9orf131Q5VYM1 1079 aa21.52■■□□□ 1.04
VAPA-204ENST00000577901 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.04
VAPA-204ENST00000577901 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
VAPA-204ENST00000577901 ADAMTS7Q9UKP4 1686 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms