RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 NUP133Q8WUM0 1156 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 LRRCC1Q9C099 1032 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 CACYBPQ9HB71 228 aaKnown RBP10.25□□□□□ -0.77
CDH8-203ENST00000577390 KIF5CO60282 957 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
CDH8-203ENST00000577390 CEBPZQ03701 1054 aaKnown RBP10.25□□□□□ -0.77
CDH8-203ENST00000577390 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
CDH8-203ENST00000577390 TMCO3Q6UWJ1 677 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
CDH8-203ENST00000577390 CUX2O14529 1486 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 PLEKHH1Q9ULM0 1364 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 ARID4AP29374 1257 aaPredicted RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 ALS2CR12Q96Q35 445 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 SEPT8Q92599 483 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 MPHOSPH6Q99547 160 aaKnown RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 SUDS3Q9H7L9 328 aaPredicted RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 GNL1P36915 607 aaPredicted RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 SYNCQ9H7C4 482 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 KINO60870 393 aaKnown RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 REC8O95072 547 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
CDH8-203ENST00000577390 NOLC1Q14978 699 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDH8-203ENST00000577390 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
CDH8-203ENST00000577390 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 NAP1L3Q99457 506 aaPredicted RBP10.23□□□□□ -0.77
CDH8-203ENST00000577390 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
CDH8-203ENST00000577390 C10orf67Q8IYJ2 551 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 CCDC69A6NI79 296 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 ERC2O15083 957 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 SERPINC1P01008 464 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 SLC20A2Q08357 652 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 IQCEQ6IPM2 695 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
CDH8-203ENST00000577390 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 IGSF3O75054 1194 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 KIAA1328Q86T90 577 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 CEP83Q9Y592 693 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
CDH8-203ENST00000577390 PPME1Q9Y570 386 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 SPATA32Q96LK8 384 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 IKBKGQ9Y6K9 419 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
CDH8-203ENST00000577390 ICE2Q659A1 982 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
CDH8-203ENST00000577390 ZSCAN23Q3MJ62 389 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 TAF4BQ92750 862 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 ZNF853P0CG23 659 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 EPSTI1Q96J88 318 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
CDH8-203ENST00000577390 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
CDH8-203ENST00000577390 KIF5AQ12840 1032 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 FILIP1Q7Z7B0 1213 aa10.22□□□□□ -0.77
CDH8-203ENST00000577390 K7ELQ4 463 aaPredicted RBP10.21□□□□□ -0.77
CDH8-203ENST00000577390 GBP6Q6ZN66 633 aa10.21□□□□□ -0.77
CDH8-203ENST00000577390 SHTN1A0MZ66 631 aa10.21□□□□□ -0.77
CDH8-203ENST00000577390 SMTNL1A8MU46 457 aa10.21□□□□□ -0.77
CDH8-203ENST00000577390 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.77
CDH8-203ENST00000577390 ANKFY1Q9P2R3 1169 aa10.21□□□□□ -0.77
CDH8-203ENST00000577390 SAMM50Q9Y512 469 aa10.21□□□□□ -0.77
CDH8-203ENST00000577390 CCDC192P0DO97 292 aa10.21□□□□□ -0.78
CDH8-203ENST00000577390 MYH10P35580 1976 aa10.21□□□□□ -0.78
CDH8-203ENST00000577390 CCDC178Q5BJE1 867 aa10.21□□□□□ -0.78
CDH8-203ENST00000577390 PROCA1Q8NCQ7 364 aaPredicted RBP10.21□□□□□ -0.78
CDH8-203ENST00000577390 NUTM2GQ5VZR2 741 aa10.21□□□□□ -0.78
CDH8-203ENST00000577390 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.78
CDH8-203ENST00000577390 C8orf34Q49A92 452 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDH8-203ENST00000577390 SPC24Q8NBT2 197 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 CUX1P39880 1505 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 IFFO1Q0D2I5 559 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 ANKIB1Q9P2G1 1089 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDH8-203ENST00000577390 RAPGEF2Q9Y4G8 1499 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 STK25O00506 426 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
CDH8-203ENST00000577390 ACTN2P35609 894 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 RPUSD2Q8IZ73 545 aaKnown RBP10.2□□□□□ -0.78
CDH8-203ENST00000577390 NCAPD3P42695 1498 aa10.2□□□□□ -0.78
CDH8-203ENST00000577390 DPH6Q7L8W6 267 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 LPXNO60711 386 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
CDH8-203ENST00000577390 CCDC14Q49A88 953 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 GTF3C6Q969F1 213 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 NACAP1Q9BZK3 213 aa10.19□□□□□ -0.78
CDH8-203ENST00000577390 FAM184BQ9ULE4 1060 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms