RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
ABR-236ENST00000577052 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
ABR-236ENST00000577052 SSFA2P28290 1259 aa23.59■■□□□ 1.37
ABR-236ENST00000577052 KDRP35968 1356 aa23.58■■□□□ 1.37
ABR-236ENST00000577052 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
ABR-236ENST00000577052 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
ABR-236ENST00000577052 TNNT2P45379 298 aaPredicted RBP23.57■■□□□ 1.36
ABR-236ENST00000577052 GNPATO15228 680 aa23.56■■□□□ 1.36
ABR-236ENST00000577052 HMGB2P26583 209 aaKnown RBP23.56■■□□□ 1.36
ABR-236ENST00000577052 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
ABR-236ENST00000577052 DIEXFQ68CQ4 756 aaKnown RBP23.56■■□□□ 1.36
ABR-236ENST00000577052 DDX10Q13206 875 aaKnown RBP23.55■■□□□ 1.36
ABR-236ENST00000577052 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
ABR-236ENST00000577052 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
ABR-236ENST00000577052 KDM6AO15550 1401 aaPredicted RBP23.52■■□□□ 1.36
ABR-236ENST00000577052 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
ABR-236ENST00000577052 COL5A3P25940 1745 aaPredicted RBP23.52■■□□□ 1.36
ABR-236ENST00000577052 ZNF831Q5JPB2 1677 aa23.51■■□□□ 1.35
ABR-236ENST00000577052 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
ABR-236ENST00000577052 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
ABR-236ENST00000577052 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
ABR-236ENST00000577052 MMP10P09238 476 aa23.5■■□□□ 1.35
ABR-236ENST00000577052 ZNF526Q8TF50 670 aaPredicted RBP23.5■■□□□ 1.35
ABR-236ENST00000577052 CICQ96RK0 1608 aaPredicted RBP23.5■■□□□ 1.35
ABR-236ENST00000577052 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
ABR-236ENST00000577052 PANK3Q9H999 370 aa23.48■■□□□ 1.35
ABR-236ENST00000577052 GPBP1L1Q9HC44 474 aaPredicted RBP23.48■■□□□ 1.35
ABR-236ENST00000577052 ERVV-2B6SEH9 535 aa23.47■■□□□ 1.35
ABR-236ENST00000577052 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
ABR-236ENST00000577052 ARHGEF1Q92888 912 aaKnown RBP23.46■■□□□ 1.35
ABR-236ENST00000577052 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
ABR-236ENST00000577052 C4AP0C0L4 1744 aa23.45■■□□□ 1.34
ABR-236ENST00000577052 DCAF5Q96JK2 942 aa23.45■■□□□ 1.34
ABR-236ENST00000577052 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
ABR-236ENST00000577052 TRAPPC3LQ5T215 181 aa23.44■■□□□ 1.34
ABR-236ENST00000577052 RC3H1Q5TC82 1133 aaKnown RBP23.44■■□□□ 1.34
ABR-236ENST00000577052 RTCBQ9Y3I0 505 aaKnown RBP23.44■■□□□ 1.34
ABR-236ENST00000577052 CNTNAP4Q9C0A0 1308 aa23.43■■□□□ 1.34
ABR-236ENST00000577052 KIF3CO14782 793 aa23.43■■□□□ 1.34
ABR-236ENST00000577052 GYS1P13807 737 aa23.43■■□□□ 1.34
ABR-236ENST00000577052 ZNF530Q6P9A1 599 aaPredicted RBP23.43■■□□□ 1.34
ABR-236ENST00000577052 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
ABR-236ENST00000577052 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
ABR-236ENST00000577052 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
ABR-236ENST00000577052 RPS6KA4O75676 772 aa23.41■■□□□ 1.34
ABR-236ENST00000577052 TJP1Q07157 1748 aa23.4■■□□□ 1.34
ABR-236ENST00000577052 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.33
ABR-236ENST00000577052 HSPA6P17066 643 aa23.39■■□□□ 1.33
ABR-236ENST00000577052 CABP4P57796 275 aa23.39■■□□□ 1.33
ABR-236ENST00000577052 TGFB2P61812 414 aa23.39■■□□□ 1.33
ABR-236ENST00000577052 NLGN1Q8N2Q7 840 aa23.39■■□□□ 1.33
ABR-236ENST00000577052 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
ABR-236ENST00000577052 DPEP1P16444 411 aa23.38■■□□□ 1.33
ABR-236ENST00000577052 ADRA2BP18089 450 aa23.38■■□□□ 1.33
ABR-236ENST00000577052 KCNA3P22001 575 aa23.38■■□□□ 1.33
ABR-236ENST00000577052 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
ABR-236ENST00000577052 AMOTQ4VCS5 1084 aa23.37■■□□□ 1.33
ABR-236ENST00000577052 NFATC2IPQ8NCF5 419 aa23.37■■□□□ 1.33
ABR-236ENST00000577052 SRP68Q9UHB9 627 aaKnown RBP23.37■■□□□ 1.33
ABR-236ENST00000577052 IL13P35225 146 aa23.36■■□□□ 1.33
ABR-236ENST00000577052 MTHFSP49914 203 aa23.36■■□□□ 1.33
ABR-236ENST00000577052 BCS1LQ9Y276 419 aa23.36■■□□□ 1.33
ABR-236ENST00000577052 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
ABR-236ENST00000577052 RFC4P35249 363 aa23.35■■□□□ 1.33
ABR-236ENST00000577052 CRKLP46109 303 aaKnown RBP23.35■■□□□ 1.33
ABR-236ENST00000577052 SULT6B1Q6IMI4 303 aa23.35■■□□□ 1.33
ABR-236ENST00000577052 MORC1Q86VD1 984 aa23.35■■□□□ 1.33
ABR-236ENST00000577052 DDR1Q08345 913 aa23.33■■□□□ 1.33
ABR-236ENST00000577052 FKBP8Q14318 412 aa23.33■■□□□ 1.33
ABR-236ENST00000577052 CCDC87Q9NVE4 849 aa23.33■■□□□ 1.33
ABR-236ENST00000577052 INTS5Q6P9B9 1019 aaKnown RBP23.32■■□□□ 1.32
ABR-236ENST00000577052 USP42Q9H9J4 1324 aaKnown RBP23.32■■□□□ 1.32
ABR-236ENST00000577052 ARFGEF1Q9Y6D6 1849 aa23.31■■□□□ 1.32
ABR-236ENST00000577052 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
ABR-236ENST00000577052 IFFO2Q5TF58 517 aa23.31■■□□□ 1.32
ABR-236ENST00000577052 PARP3Q9Y6F1 533 aa23.31■■□□□ 1.32
ABR-236ENST00000577052 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
ABR-236ENST00000577052 ARHGAP27Q6ZUM4 889 aa23.3■■□□□ 1.32
ABR-236ENST00000577052 LGR6Q9HBX8 967 aa23.3■■□□□ 1.32
ABR-236ENST00000577052 FCHSD2O94868 740 aa23.29■■□□□ 1.32
ABR-236ENST00000577052 VIRMAQ69YN4 1812 aaKnown RBP23.29■■□□□ 1.32
ABR-236ENST00000577052 DNAJC10Q8IXB1 793 aa23.28■■□□□ 1.32
ABR-236ENST00000577052 MIER1Q8N108 512 aa23.28■■□□□ 1.32
ABR-236ENST00000577052 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
ABR-236ENST00000577052 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
ABR-236ENST00000577052 MRC1P22897 1456 aa23.26■■□□□ 1.31
ABR-236ENST00000577052 TM4SF1P30408 202 aa23.26■■□□□ 1.31
ABR-236ENST00000577052 KCPQ6ZWJ8 1503 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
ABR-236ENST00000577052 CHRNA5P30532 468 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 SLC39A6Q13433 755 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 SLC52A2Q9HAB3 445 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
ABR-236ENST00000577052 C9orf131Q5VYM1 1079 aa23.23■■□□□ 1.31
ABR-236ENST00000577052 SOS1Q07889 1333 aaPredicted RBP23.23■■□□□ 1.31
ABR-236ENST00000577052 SBF1O95248 1867 aa23.23■■□□□ 1.31
ABR-236ENST00000577052 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
ABR-236ENST00000577052 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
ABR-236ENST00000577052 ANP32CO43423 234 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms