RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 WWC3Q9ULE0 1092 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 ITGB4P16144 1822 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
CALCOCO2-228ENST00000576582 PHKG2P15735 406 aa14.83□□□□□ -0.04
CALCOCO2-228ENST00000576582 ITPK1Q13572 414 aa14.83□□□□□ -0.04
CALCOCO2-228ENST00000576582 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
CALCOCO2-228ENST00000576582 TOGARAM1Q9Y4F4 1720 aa14.83□□□□□ -0.04
CALCOCO2-228ENST00000576582 TOMM70O94826 608 aa14.82□□□□□ -0.04
CALCOCO2-228ENST00000576582 ADRA2BP18089 450 aa14.82□□□□□ -0.04
CALCOCO2-228ENST00000576582 RTCBQ9Y3I0 505 aaKnown RBP14.82□□□□□ -0.04
CALCOCO2-228ENST00000576582 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
CALCOCO2-228ENST00000576582 RC3H1Q5TC82 1133 aaKnown RBP14.81□□□□□ -0.04
CALCOCO2-228ENST00000576582 PLEKHG2Q9H7P9 1386 aa14.81□□□□□ -0.04
CALCOCO2-228ENST00000576582 ERVV-2B6SEH9 535 aa14.8□□□□□ -0.04
CALCOCO2-228ENST00000576582 A0A0G2JLW4 131 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 HSP90AB1P08238 724 aaKnown RBP14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 ARHGAP27Q6ZUM4 889 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 CCDC87Q9NVE4 849 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 BCS1LQ9Y276 419 aa14.79□□□□□ -0.04
CALCOCO2-228ENST00000576582 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
CALCOCO2-228ENST00000576582 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
CALCOCO2-228ENST00000576582 RFC4P35249 363 aa14.78□□□□□ -0.04
CALCOCO2-228ENST00000576582 ARHGEF1Q92888 912 aaKnown RBP14.78□□□□□ -0.04
CALCOCO2-228ENST00000576582 RPS6KA4O75676 772 aa14.77□□□□□ -0.05
CALCOCO2-228ENST00000576582 DNAJC5GQ8N7S2 189 aa14.77□□□□□ -0.05
CALCOCO2-228ENST00000576582 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
CALCOCO2-228ENST00000576582 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
CALCOCO2-228ENST00000576582 PARP3Q9Y6F1 533 aa14.77□□□□□ -0.05
CALCOCO2-228ENST00000576582 CNTNAP4Q9C0A0 1308 aa14.76□□□□□ -0.05
CALCOCO2-228ENST00000576582 GYS1P13807 737 aa14.76□□□□□ -0.05
CALCOCO2-228ENST00000576582 DPEP1P16444 411 aa14.76□□□□□ -0.05
CALCOCO2-228ENST00000576582 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 KDRP35968 1356 aa14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 FCHSD2O94868 740 aa14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 EIF4A2Q14240 407 aaKnown RBP14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 PLEKHO1Q53GL0 409 aaPredicted RBP14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 RBM46Q8TBY0 533 aaKnown RBP14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 KIF13BQ9NQT8 1826 aa14.75□□□□□ -0.05
CALCOCO2-228ENST00000576582 AMOTQ4VCS5 1084 aa14.74□□□□□ -0.05
CALCOCO2-228ENST00000576582 PIM2Q9P1W9 311 aa14.74□□□□□ -0.05
CALCOCO2-228ENST00000576582 KCNA3P22001 575 aa14.73□□□□□ -0.05
CALCOCO2-228ENST00000576582 CABP4P57796 275 aa14.73□□□□□ -0.05
CALCOCO2-228ENST00000576582 NMRK2Q9NPI5 230 aa14.73□□□□□ -0.05
CALCOCO2-228ENST00000576582 ZNF831Q5JPB2 1677 aa14.72□□□□□ -0.05
CALCOCO2-228ENST00000576582 FSTL1Q12841 308 aa14.72□□□□□ -0.05
CALCOCO2-228ENST00000576582 C9orf131Q5VYM1 1079 aa14.72□□□□□ -0.05
CALCOCO2-228ENST00000576582 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
CALCOCO2-228ENST00000576582 KDM2BQ8NHM5 1336 aa14.71□□□□□ -0.05
CALCOCO2-228ENST00000576582 CLSPNQ9HAW4 1339 aa14.71□□□□□ -0.05
CALCOCO2-228ENST00000576582 DALRD3Q5D0E6 543 aaKnown RBP14.71□□□□□ -0.05
CALCOCO2-228ENST00000576582 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
CALCOCO2-228ENST00000576582 MTHFSP49914 203 aa14.7□□□□□ -0.06
CALCOCO2-228ENST00000576582 ZNF530Q6P9A1 599 aaPredicted RBP14.7□□□□□ -0.06
CALCOCO2-228ENST00000576582 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
CALCOCO2-228ENST00000576582 KIAA1551Q9HCM1 1747 aa14.69□□□□□ -0.06
CALCOCO2-228ENST00000576582 C1orf141Q5JVX7 400 aa14.69□□□□□ -0.06
CALCOCO2-228ENST00000576582 C4AP0C0L4 1744 aa14.69□□□□□ -0.06
CALCOCO2-228ENST00000576582 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
CALCOCO2-228ENST00000576582 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
CALCOCO2-228ENST00000576582 JMYQ8N9B5 988 aa14.68□□□□□ -0.06
CALCOCO2-228ENST00000576582 NFATC2IPQ8NCF5 419 aa14.68□□□□□ -0.06
CALCOCO2-228ENST00000576582 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
CALCOCO2-228ENST00000576582 FKBP8Q14318 412 aa14.67□□□□□ -0.06
CALCOCO2-228ENST00000576582 KLRG1Q96E93 195 aa14.67□□□□□ -0.06
CALCOCO2-228ENST00000576582 TM4SF1P30408 202 aa14.66□□□□□ -0.06
CALCOCO2-228ENST00000576582 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
CALCOCO2-228ENST00000576582 KDM6AO15550 1401 aaPredicted RBP14.66□□□□□ -0.06
CALCOCO2-228ENST00000576582 DDR1Q08345 913 aa14.65□□□□□ -0.06
CALCOCO2-228ENST00000576582 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
CALCOCO2-228ENST00000576582 SRP68Q9UHB9 627 aaKnown RBP14.65□□□□□ -0.06
CALCOCO2-228ENST00000576582 COL5A3P25940 1745 aaPredicted RBP14.65□□□□□ -0.06
CALCOCO2-228ENST00000576582 ZC3H4Q9UPT8 1303 aaKnown RBP14.65□□□□□ -0.06
CALCOCO2-228ENST00000576582 ZPR1O75312 459 aa14.64□□□□□ -0.07
CALCOCO2-228ENST00000576582 INTS5Q6P9B9 1019 aaKnown RBP14.64□□□□□ -0.07
CALCOCO2-228ENST00000576582 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
CALCOCO2-228ENST00000576582 MYH14Q7Z406 1995 aaKnown RBP14.64□□□□□ -0.07
CALCOCO2-228ENST00000576582 BRCA1P38398 1863 aaKnown RBP14.63□□□□□ -0.07
CALCOCO2-228ENST00000576582 POLRMTO00411 1230 aaKnown RBP14.63□□□□□ -0.07
CALCOCO2-228ENST00000576582 CHRNA5P30532 468 aa14.63□□□□□ -0.07
CALCOCO2-228ENST00000576582 SMC1BQ8NDV3 1235 aa14.63□□□□□ -0.07
CALCOCO2-228ENST00000576582 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
CALCOCO2-228ENST00000576582 PANK3Q9H999 370 aa14.62□□□□□ -0.07
CALCOCO2-228ENST00000576582 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 HTRA3P83110 453 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 USPL1Q5W0Q7 1092 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 AEBP1Q8IUX7 1158 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 WDR90Q96KV7 1748 aa14.61□□□□□ -0.07
CALCOCO2-228ENST00000576582 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 VEGFAP15692 232 aaPredicted RBP14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 AKAP4Q5JQC9 854 aa14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 NARFQ9UHQ1 456 aa14.6□□□□□ -0.07
CALCOCO2-228ENST00000576582 GLTPD2A6NH11 291 aa14.59□□□□□ -0.07
CALCOCO2-228ENST00000576582 LMNB1P20700 586 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms