RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 KDRP35968 1356 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 MMP10P09238 476 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 HSPA6P17066 643 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
TSR1-205ENST00000576202 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 KIF13BQ9NQT8 1826 aa18.04■□□□□ 0.48
TSR1-205ENST00000576202 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
TSR1-205ENST00000576202 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
TSR1-205ENST00000576202 TRAPPC3LQ5T215 181 aa18.02■□□□□ 0.48
TSR1-205ENST00000576202 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
TSR1-205ENST00000576202 RTCBQ9Y3I0 505 aaKnown RBP18.02■□□□□ 0.48
TSR1-205ENST00000576202 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
TSR1-205ENST00000576202 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
TSR1-205ENST00000576202 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
TSR1-205ENST00000576202 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
TSR1-205ENST00000576202 N4BP2Q86UW6 1770 aaPredicted RBP18■□□□□ 0.47
TSR1-205ENST00000576202 TGFB2P61812 414 aa18■□□□□ 0.47
TSR1-205ENST00000576202 DCAF5Q96JK2 942 aa18■□□□□ 0.47
TSR1-205ENST00000576202 SLC4A9Q96Q91 983 aa18■□□□□ 0.47
TSR1-205ENST00000576202 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
TSR1-205ENST00000576202 C10orf71Q711Q0 1435 aa17.99■□□□□ 0.47
TSR1-205ENST00000576202 KIF3CO14782 793 aa17.99■□□□□ 0.47
TSR1-205ENST00000576202 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
TSR1-205ENST00000576202 ADRA2BP18089 450 aa17.99■□□□□ 0.47
TSR1-205ENST00000576202 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
TSR1-205ENST00000576202 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
TSR1-205ENST00000576202 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
TSR1-205ENST00000576202 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
TSR1-205ENST00000576202 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
TSR1-205ENST00000576202 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
TSR1-205ENST00000576202 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
TSR1-205ENST00000576202 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
TSR1-205ENST00000576202 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
TSR1-205ENST00000576202 KDM6AO15550 1401 aaPredicted RBP17.97■□□□□ 0.47
TSR1-205ENST00000576202 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
TSR1-205ENST00000576202 GYS1P13807 737 aa17.96■□□□□ 0.47
TSR1-205ENST00000576202 RFC4P35249 363 aa17.96■□□□□ 0.47
TSR1-205ENST00000576202 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
TSR1-205ENST00000576202 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
TSR1-205ENST00000576202 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
TSR1-205ENST00000576202 CABP4P57796 275 aa17.94■□□□□ 0.46
TSR1-205ENST00000576202 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
TSR1-205ENST00000576202 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
TSR1-205ENST00000576202 DPEP1P16444 411 aa17.93■□□□□ 0.46
TSR1-205ENST00000576202 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
TSR1-205ENST00000576202 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
TSR1-205ENST00000576202 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
TSR1-205ENST00000576202 TOMM70O94826 608 aa17.91■□□□□ 0.46
TSR1-205ENST00000576202 FCHSD2O94868 740 aa17.91■□□□□ 0.46
TSR1-205ENST00000576202 MTHFSP49914 203 aa17.91■□□□□ 0.46
TSR1-205ENST00000576202 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
TSR1-205ENST00000576202 PANK3Q9H999 370 aa17.91■□□□□ 0.46
TSR1-205ENST00000576202 APLP1P51693 650 aa17.9■□□□□ 0.46
TSR1-205ENST00000576202 AEBP1Q8IUX7 1158 aa17.9■□□□□ 0.46
TSR1-205ENST00000576202 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
TSR1-205ENST00000576202 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
TSR1-205ENST00000576202 TJP1Q07157 1748 aa17.89■□□□□ 0.46
TSR1-205ENST00000576202 KCNA3P22001 575 aa17.89■□□□□ 0.45
TSR1-205ENST00000576202 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
TSR1-205ENST00000576202 NFATC2IPQ8NCF5 419 aa17.89■□□□□ 0.45
TSR1-205ENST00000576202 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
TSR1-205ENST00000576202 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
TSR1-205ENST00000576202 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
TSR1-205ENST00000576202 NMRK2Q9NPI5 230 aa17.87■□□□□ 0.45
TSR1-205ENST00000576202 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
TSR1-205ENST00000576202 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
TSR1-205ENST00000576202 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
TSR1-205ENST00000576202 HSPA5P11021 654 aaKnown RBP17.86■□□□□ 0.45
TSR1-205ENST00000576202 FKBP8Q14318 412 aa17.86■□□□□ 0.45
TSR1-205ENST00000576202 C9orf131Q5VYM1 1079 aa17.86■□□□□ 0.45
TSR1-205ENST00000576202 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
TSR1-205ENST00000576202 DDR1Q08345 913 aa17.85■□□□□ 0.45
TSR1-205ENST00000576202 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
TSR1-205ENST00000576202 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
TSR1-205ENST00000576202 IL13P35225 146 aa17.83■□□□□ 0.44
TSR1-205ENST00000576202 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
TSR1-205ENST00000576202 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
TSR1-205ENST00000576202 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
TSR1-205ENST00000576202 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
TSR1-205ENST00000576202 DNAJC5GQ8N7S2 189 aa17.82■□□□□ 0.44
TSR1-205ENST00000576202 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
TSR1-205ENST00000576202 TM4SF1P30408 202 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 CHRNA5P30532 468 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 DNAJC10Q8IXB1 793 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
TSR1-205ENST00000576202 PCGF6Q9BYE7 350 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 KCPQ6ZWJ8 1503 aa17.81■□□□□ 0.44
TSR1-205ENST00000576202 KDM2BQ8NHM5 1336 aa17.8■□□□□ 0.44
TSR1-205ENST00000576202 ZPR1O75312 459 aa17.8■□□□□ 0.44
TSR1-205ENST00000576202 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
TSR1-205ENST00000576202 RNF181Q9P0P0 153 aa17.8■□□□□ 0.44
TSR1-205ENST00000576202 MRC1P22897 1456 aa17.8■□□□□ 0.44
TSR1-205ENST00000576202 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
TSR1-205ENST00000576202 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
TSR1-205ENST00000576202 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
TSR1-205ENST00000576202 SBF1O95248 1867 aa17.78■□□□□ 0.44
TSR1-205ENST00000576202 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms