RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 VIRMAQ69YN4 1812 aaKnown RBP27.84■■■□□ 2.05
ABR-233ENST00000575934 MSL1Q68DK7 614 aa27.84■■■□□ 2.05
ABR-233ENST00000575934 ZNF530Q6P9A1 599 aaPredicted RBP27.84■■■□□ 2.05
ABR-233ENST00000575934 LINC00116Q8NCU8 138 aa27.84■■■□□ 2.05
ABR-233ENST00000575934 COL5A3P25940 1745 aaPredicted RBP27.84■■■□□ 2.05
ABR-233ENST00000575934 ITPK1Q13572 414 aa27.82■■■□□ 2.04
ABR-233ENST00000575934 SULT6B1Q6IMI4 303 aa27.82■■■□□ 2.04
ABR-233ENST00000575934 ATP6V1AP38606 617 aa27.81■■■□□ 2.04
ABR-233ENST00000575934 NLGN2Q8NFZ4 835 aa27.81■■■□□ 2.04
ABR-233ENST00000575934 SSFA2P28290 1259 aa27.8■■■□□ 2.04
ABR-233ENST00000575934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.79■■■□□ 2.04
ABR-233ENST00000575934 PHF14O94880 888 aa27.78■■■□□ 2.04
ABR-233ENST00000575934 MTHFSP49914 203 aa27.78■■■□□ 2.04
ABR-233ENST00000575934 MYH14Q7Z406 1995 aaKnown RBP27.77■■■□□ 2.04
ABR-233ENST00000575934 GPR162Q16538 588 aa27.77■■■□□ 2.04
ABR-233ENST00000575934 C1orf141Q5JVX7 400 aa27.77■■■□□ 2.04
ABR-233ENST00000575934 SMIM5Q71RC9 77 aa27.77■■■□□ 2.04
ABR-233ENST00000575934 NPC1L1Q9UHC9 1359 aa27.76■■■□□ 2.03
ABR-233ENST00000575934 SLC4A9Q96Q91 983 aa27.76■■■□□ 2.03
ABR-233ENST00000575934 GNPATO15228 680 aa27.75■■■□□ 2.03
ABR-233ENST00000575934 CABP4P57796 275 aa27.75■■■□□ 2.03
ABR-233ENST00000575934 CC2D1BQ5T0F9 858 aaKnown RBP27.75■■■□□ 2.03
ABR-233ENST00000575934 CICQ96RK0 1608 aaPredicted RBP27.74■■■□□ 2.03
ABR-233ENST00000575934 GOLGB1Q14789 3259 aaKnown RBP27.73■■■□□ 2.03
ABR-233ENST00000575934 CD2APQ9Y5K6 639 aa27.72■■■□□ 2.03
ABR-233ENST00000575934 TJP1Q07157 1748 aa27.71■■■□□ 2.03
ABR-233ENST00000575934 RBM42Q9BTD8 480 aaKnown RBP27.71■■■□□ 2.03
ABR-233ENST00000575934 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
ABR-233ENST00000575934 ZNF784Q8NCA9 323 aaPredicted RBP27.7■■■□□ 2.02
ABR-233ENST00000575934 ADAMTS7Q9UKP4 1686 aa27.7■■■□□ 2.02
ABR-233ENST00000575934 COL3A1P02461 1466 aaPredicted RBP27.7■■■□□ 2.02
ABR-233ENST00000575934 C4AP0C0L4 1744 aa27.7■■■□□ 2.02
ABR-233ENST00000575934 AKAP4Q5JQC9 854 aa27.69■■■□□ 2.02
ABR-233ENST00000575934 CNTNAP4Q9C0A0 1308 aa27.68■■■□□ 2.02
ABR-233ENST00000575934 DIAPH1O60610 1272 aaKnown RBP27.68■■■□□ 2.02
ABR-233ENST00000575934 RC3H1Q5TC82 1133 aaKnown RBP27.68■■■□□ 2.02
ABR-233ENST00000575934 NFATC2IPQ8NCF5 419 aa27.68■■■□□ 2.02
ABR-233ENST00000575934 MRC1P22897 1456 aa27.68■■■□□ 2.02
ABR-233ENST00000575934 HMOX1P09601 288 aa27.67■■■□□ 2.02
ABR-233ENST00000575934 YBX3P16989 372 aaKnown RBP eCLIP27.67■■■□□ 2.02
ABR-233ENST00000575934 RTCBQ9Y3I0 505 aaKnown RBP27.67■■■□□ 2.02
ABR-233ENST00000575934 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
ABR-233ENST00000575934 ADRA2BP18089 450 aa27.64■■■□□ 2.02
ABR-233ENST00000575934 GRIN3BO60391 1043 aa27.63■■■□□ 2.01
ABR-233ENST00000575934 TRAPPC3LQ5T215 181 aa27.63■■■□□ 2.01
ABR-233ENST00000575934 PTCD1O75127 700 aaKnown RBP27.62■■■□□ 2.01
ABR-233ENST00000575934 SLC52A2Q9HAB3 445 aa27.62■■■□□ 2.01
ABR-233ENST00000575934 RPS6KA4O75676 772 aa27.61■■■□□ 2.01
ABR-233ENST00000575934 RNMTO43148 476 aaKnown RBP27.6■■■□□ 2.01
ABR-233ENST00000575934 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
ABR-233ENST00000575934 ARHGEF1Q92888 912 aaKnown RBP27.6■■■□□ 2.01
ABR-233ENST00000575934 LGR6Q9HBX8 967 aa27.6■■■□□ 2.01
ABR-233ENST00000575934 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
ABR-233ENST00000575934 UBR2Q8IWV8 1755 aa27.59■■■□□ 2.01
ABR-233ENST00000575934 MMP10P09238 476 aa27.58■■■□□ 2.01
ABR-233ENST00000575934 CNGB1Q14028 1251 aaPredicted RBP27.58■■■□□ 2.01
ABR-233ENST00000575934 CRKLP46109 303 aaKnown RBP27.57■■■□□ 2
ABR-233ENST00000575934 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
ABR-233ENST00000575934 NLGN1Q8N2Q7 840 aa27.56■■■□□ 2
ABR-233ENST00000575934 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
ABR-233ENST00000575934 GYS1P13807 737 aa27.55■■■□□ 2
ABR-233ENST00000575934 SIPA1L3O60292 1781 aaPredicted RBP27.55■■■□□ 2
ABR-233ENST00000575934 RFC4P35249 363 aa27.54■■■□□ 2
ABR-233ENST00000575934 BRCA1P38398 1863 aaKnown RBP27.53■■■□□ 2
ABR-233ENST00000575934 C10orf71Q711Q0 1435 aa27.52■■■□□ 2
ABR-233ENST00000575934 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
ABR-233ENST00000575934 PXDNLA1KZ92 1463 aa27.51■■■□□ 2
ABR-233ENST00000575934 SLC39A6Q13433 755 aa27.51■■□□□ 1.99
ABR-233ENST00000575934 INTS5Q6P9B9 1019 aaKnown RBP27.5■■□□□ 1.99
ABR-233ENST00000575934 DNAJC10Q8IXB1 793 aa27.5■■□□□ 1.99
ABR-233ENST00000575934 USP42Q9H9J4 1324 aaKnown RBP27.48■■□□□ 1.99
ABR-233ENST00000575934 GAS2L2Q8NHY3 880 aa27.48■■□□□ 1.99
ABR-233ENST00000575934 CCDC87Q9NVE4 849 aa27.47■■□□□ 1.99
ABR-233ENST00000575934 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
ABR-233ENST00000575934 SRP68Q9UHB9 627 aaKnown RBP27.46■■□□□ 1.99
ABR-233ENST00000575934 WWC3Q9ULE0 1092 aa27.46■■□□□ 1.99
ABR-233ENST00000575934 SOS1Q07889 1333 aaPredicted RBP27.45■■□□□ 1.99
ABR-233ENST00000575934 CYP19A1P11511 503 aaPredicted RBP27.45■■□□□ 1.98
ABR-233ENST00000575934 TGFB2P61812 414 aa27.45■■□□□ 1.98
ABR-233ENST00000575934 PARP3Q9Y6F1 533 aa27.45■■□□□ 1.98
ABR-233ENST00000575934 GNAT3A8MTJ3 354 aa27.44■■□□□ 1.98
ABR-233ENST00000575934 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
ABR-233ENST00000575934 PPP2R1AP30153 589 aa27.43■■□□□ 1.98
ABR-233ENST00000575934 FKBP8Q14318 412 aa27.43■■□□□ 1.98
ABR-233ENST00000575934 IL17REQ8NFR9 667 aa27.43■■□□□ 1.98
ABR-233ENST00000575934 RSPH6AQ9H0K4 717 aa27.43■■□□□ 1.98
ABR-233ENST00000575934 ADCY9O60503 1353 aa27.43■■□□□ 1.98
ABR-233ENST00000575934 ARFGEF1Q9Y6D6 1849 aa27.42■■□□□ 1.98
ABR-233ENST00000575934 ATP10DQ9P241 1426 aa27.41■■□□□ 1.98
ABR-233ENST00000575934 AFDNP55196 1824 aaKnown RBP27.41■■□□□ 1.98
ABR-233ENST00000575934 PRKAR2BP31323 418 aa27.41■■□□□ 1.98
ABR-233ENST00000575934 COL15A1P39059 1388 aa27.4■■□□□ 1.98
ABR-233ENST00000575934 CEMIPQ8WUJ3 1361 aa27.4■■□□□ 1.98
ABR-233ENST00000575934 PHACTR3Q96KR7 559 aa27.4■■□□□ 1.98
ABR-233ENST00000575934 NUDCQ9Y266 331 aa27.4■■□□□ 1.98
ABR-233ENST00000575934 ZBTB1Q9Y2K1 713 aa27.4■■□□□ 1.98
ABR-233ENST00000575934 DDR1Q08345 913 aa27.39■■□□□ 1.98
ABR-233ENST00000575934 TEFQ10587 303 aa27.39■■□□□ 1.98
ABR-233ENST00000575934 TTC5Q8N0Z6 440 aa27.39■■□□□ 1.98
ABR-233ENST00000575934 A0A0G2JLW4 131 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms