RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TGFB2P61812 414 aa13.89□□□□□ -0.19
CALCOCO2-227ENST00000575560 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
CALCOCO2-227ENST00000575560 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
CALCOCO2-227ENST00000575560 NLGN1Q8N2Q7 840 aa13.88□□□□□ -0.19
CALCOCO2-227ENST00000575560 DNAJC5GQ8N7S2 189 aa13.88□□□□□ -0.19
CALCOCO2-227ENST00000575560 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-227ENST00000575560 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 TOMM70O94826 608 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 APLP1P51693 650 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 SLC4A9Q96Q91 983 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
CALCOCO2-227ENST00000575560 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-227ENST00000575560 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-227ENST00000575560 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-227ENST00000575560 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
CALCOCO2-227ENST00000575560 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
CALCOCO2-227ENST00000575560 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
CALCOCO2-227ENST00000575560 KDRP35968 1356 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 GYS1P13807 737 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 KCNA3P22001 575 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
CALCOCO2-227ENST00000575560 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
CALCOCO2-227ENST00000575560 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
CALCOCO2-227ENST00000575560 DPEP1P16444 411 aa13.83□□□□□ -0.2
CALCOCO2-227ENST00000575560 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
CALCOCO2-227ENST00000575560 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
CALCOCO2-227ENST00000575560 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-227ENST00000575560 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
CALCOCO2-227ENST00000575560 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
CALCOCO2-227ENST00000575560 PCNTO95613 3336 aa13.82□□□□□ -0.2
CALCOCO2-227ENST00000575560 FCHSD2O94868 740 aa13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 RFC4P35249 363 aa13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO2-227ENST00000575560 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
CALCOCO2-227ENST00000575560 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
CALCOCO2-227ENST00000575560 RBM46Q8TBY0 533 aaKnown RBP13.79□□□□□ -0.2
CALCOCO2-227ENST00000575560 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO2-227ENST00000575560 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
CALCOCO2-227ENST00000575560 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
CALCOCO2-227ENST00000575560 C4AP0C0L4 1744 aa13.78□□□□□ -0.2
CALCOCO2-227ENST00000575560 KDM6AO15550 1401 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-227ENST00000575560 TNNT2P45379 298 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-227ENST00000575560 CABP4P57796 275 aa13.77□□□□□ -0.21
CALCOCO2-227ENST00000575560 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 FSTL1Q12841 308 aa13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 FKBP8Q14318 412 aa13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 MYH14Q7Z406 1995 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO2-227ENST00000575560 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 MTHFSP49914 203 aa13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 DDR1Q08345 913 aa13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 JMYQ8N9B5 988 aa13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-227ENST00000575560 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-227ENST00000575560 TM4SF1P30408 202 aa13.74□□□□□ -0.21
CALCOCO2-227ENST00000575560 HTRA3P83110 453 aa13.74□□□□□ -0.21
CALCOCO2-227ENST00000575560 C16orf71Q8IYS4 520 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-227ENST00000575560 KDM2BQ8NHM5 1336 aa13.73□□□□□ -0.21
CALCOCO2-227ENST00000575560 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-227ENST00000575560 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
CALCOCO2-227ENST00000575560 RNF181Q9P0P0 153 aa13.73□□□□□ -0.21
CALCOCO2-227ENST00000575560 ARFGEF1Q9Y6D6 1849 aa13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 CHRNA5P30532 468 aa13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
CALCOCO2-227ENST00000575560 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
CALCOCO2-227ENST00000575560 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
CALCOCO2-227ENST00000575560 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-227ENST00000575560 PANK3Q9H999 370 aa13.7□□□□□ -0.22
CALCOCO2-227ENST00000575560 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
CALCOCO2-227ENST00000575560 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
CALCOCO2-227ENST00000575560 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
CALCOCO2-227ENST00000575560 ZPR1O75312 459 aa13.68□□□□□ -0.22
CALCOCO2-227ENST00000575560 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
CALCOCO2-227ENST00000575560 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
CALCOCO2-227ENST00000575560 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 ZC3H4Q9UPT8 1303 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 IL13P35225 146 aa13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 PRELPP51888 382 aa13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 SBF1O95248 1867 aa13.67□□□□□ -0.22
CALCOCO2-227ENST00000575560 TJP1Q07157 1748 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms