RNA–Protein interactions for RNA: ENST00000574007.5

P4HB-218, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-218ENST00000574007 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.6
P4HB-218ENST00000574007 UBR3Q6ZT12 1888 aa18.83■□□□□ 0.6
P4HB-218ENST00000574007 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
P4HB-218ENST00000574007 ATP6V1AP38606 617 aa18.82■□□□□ 0.6
P4HB-218ENST00000574007 ITPK1Q13572 414 aa18.82■□□□□ 0.6
P4HB-218ENST00000574007 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
P4HB-218ENST00000574007 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
P4HB-218ENST00000574007 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
P4HB-218ENST00000574007 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
P4HB-218ENST00000574007 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
P4HB-218ENST00000574007 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
P4HB-218ENST00000574007 MSL1Q68DK7 614 aa18.8■□□□□ 0.6
P4HB-218ENST00000574007 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
P4HB-218ENST00000574007 CFAP53Q96M91 514 aa18.8■□□□□ 0.6
P4HB-218ENST00000574007 PHF14O94880 888 aa18.79■□□□□ 0.6
P4HB-218ENST00000574007 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
P4HB-218ENST00000574007 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
P4HB-218ENST00000574007 ZNF831Q5JPB2 1677 aa18.79■□□□□ 0.6
P4HB-218ENST00000574007 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
P4HB-218ENST00000574007 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
P4HB-218ENST00000574007 KLHL34Q8N239 644 aa18.78■□□□□ 0.6
P4HB-218ENST00000574007 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
P4HB-218ENST00000574007 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
P4HB-218ENST00000574007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.77■□□□□ 0.6
P4HB-218ENST00000574007 GNPATO15228 680 aa18.77■□□□□ 0.6
P4HB-218ENST00000574007 LGR6Q9HBX8 967 aa18.77■□□□□ 0.6
P4HB-218ENST00000574007 RNMTO43148 476 aaKnown RBP18.76■□□□□ 0.59
P4HB-218ENST00000574007 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
P4HB-218ENST00000574007 SSFA2P28290 1259 aa18.76■□□□□ 0.59
P4HB-218ENST00000574007 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
P4HB-218ENST00000574007 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
P4HB-218ENST00000574007 ADAMTS7Q9UKP4 1686 aa18.74■□□□□ 0.59
P4HB-218ENST00000574007 MRC1P22897 1456 aa18.74■□□□□ 0.59
P4HB-218ENST00000574007 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
P4HB-218ENST00000574007 MYH14Q7Z406 1995 aaKnown RBP18.73■□□□□ 0.59
P4HB-218ENST00000574007 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
P4HB-218ENST00000574007 CNTNAP4Q9C0A0 1308 aa18.72■□□□□ 0.59
P4HB-218ENST00000574007 TJP1Q07157 1748 aa18.71■□□□□ 0.59
P4HB-218ENST00000574007 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
P4HB-218ENST00000574007 GAS2L2Q8NHY3 880 aa18.71■□□□□ 0.59
P4HB-218ENST00000574007 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
P4HB-218ENST00000574007 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
P4HB-218ENST00000574007 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
P4HB-218ENST00000574007 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
P4HB-218ENST00000574007 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
P4HB-218ENST00000574007 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
P4HB-218ENST00000574007 NLGN2Q8NFZ4 835 aa18.69■□□□□ 0.58
P4HB-218ENST00000574007 CICQ96RK0 1608 aaPredicted RBP18.69■□□□□ 0.58
P4HB-218ENST00000574007 RPS6KA4O75676 772 aa18.68■□□□□ 0.58
P4HB-218ENST00000574007 YY1P25490 414 aa18.68■□□□□ 0.58
P4HB-218ENST00000574007 CRKLP46109 303 aaKnown RBP18.68■□□□□ 0.58
P4HB-218ENST00000574007 TRAPPC3LQ5T215 181 aa18.68■□□□□ 0.58
P4HB-218ENST00000574007 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
P4HB-218ENST00000574007 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 ADRA2BP18089 450 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 TEFQ10587 303 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 DNAJC10Q8IXB1 793 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 ARHGEF1Q92888 912 aaKnown RBP18.66■□□□□ 0.58
P4HB-218ENST00000574007 C4AP0C0L4 1744 aa18.66■□□□□ 0.58
P4HB-218ENST00000574007 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
P4HB-218ENST00000574007 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
P4HB-218ENST00000574007 GPR162Q16538 588 aa18.65■□□□□ 0.58
P4HB-218ENST00000574007 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
P4HB-218ENST00000574007 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
P4HB-218ENST00000574007 FCHSD2O94868 740 aa18.64■□□□□ 0.57
P4HB-218ENST00000574007 RFC4P35249 363 aa18.64■□□□□ 0.57
P4HB-218ENST00000574007 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
P4HB-218ENST00000574007 UTRNP46939 3433 aa18.64■□□□□ 0.57
P4HB-218ENST00000574007 CHD4Q14839 1912 aa18.64■□□□□ 0.57
P4HB-218ENST00000574007 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
P4HB-218ENST00000574007 GOLGB1Q14789 3259 aaKnown RBP18.63■□□□□ 0.57
P4HB-218ENST00000574007 MMP10P09238 476 aa18.62■□□□□ 0.57
P4HB-218ENST00000574007 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
P4HB-218ENST00000574007 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
P4HB-218ENST00000574007 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
P4HB-218ENST00000574007 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
P4HB-218ENST00000574007 GYS1P13807 737 aa18.61■□□□□ 0.57
P4HB-218ENST00000574007 NLGN1Q8N2Q7 840 aa18.61■□□□□ 0.57
P4HB-218ENST00000574007 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
P4HB-218ENST00000574007 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
P4HB-218ENST00000574007 RALBP1Q15311 655 aa18.59■□□□□ 0.57
P4HB-218ENST00000574007 ZNF790Q6PG37 636 aa18.59■□□□□ 0.57
P4HB-218ENST00000574007 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
P4HB-218ENST00000574007 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.57
P4HB-218ENST00000574007 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
P4HB-218ENST00000574007 USP42Q9H9J4 1324 aaKnown RBP18.57■□□□□ 0.56
P4HB-218ENST00000574007 NEFMP07197 916 aa18.57■□□□□ 0.56
P4HB-218ENST00000574007 YBX3P16989 372 aaKnown RBP eCLIP18.57■□□□□ 0.562e-12■■□□□ 12.5
P4HB-218ENST00000574007 MCM10Q7L590 875 aa18.57■□□□□ 0.56
P4HB-218ENST00000574007 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
P4HB-218ENST00000574007 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
P4HB-218ENST00000574007 HEG1Q9ULI3 1381 aa18.56■□□□□ 0.56
P4HB-218ENST00000574007 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
P4HB-218ENST00000574007 STARD3NLO95772 234 aa18.56■□□□□ 0.56
P4HB-218ENST00000574007 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
P4HB-218ENST00000574007 KCNQ3O43525 872 aa18.55■□□□□ 0.56
P4HB-218ENST00000574007 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
P4HB-218ENST00000574007 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
P4HB-218ENST00000574007 FKBP8Q14318 412 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms