RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 PHKG2P15735 406 aa12.27□□□□□ -0.45
NDE1-207ENST00000573203 IL13P35225 146 aa12.27□□□□□ -0.45
NDE1-207ENST00000573203 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
NDE1-207ENST00000573203 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
NDE1-207ENST00000573203 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
NDE1-207ENST00000573203 HAX1O00165 279 aa12.26□□□□□ -0.45
NDE1-207ENST00000573203 KCNQ4P56696 695 aa12.26□□□□□ -0.45
NDE1-207ENST00000573203 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
NDE1-207ENST00000573203 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
NDE1-207ENST00000573203 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
NDE1-207ENST00000573203 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
NDE1-207ENST00000573203 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
NDE1-207ENST00000573203 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
NDE1-207ENST00000573203 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
NDE1-207ENST00000573203 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
NDE1-207ENST00000573203 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
NDE1-207ENST00000573203 KDRP35968 1356 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 QSER1Q2KHR3 1735 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 PALLDQ8WX93 1383 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 PIGBQ92521 554 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
NDE1-207ENST00000573203 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
NDE1-207ENST00000573203 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
NDE1-207ENST00000573203 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
NDE1-207ENST00000573203 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
NDE1-207ENST00000573203 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
NDE1-207ENST00000573203 C5P01031 1676 aa12.22□□□□□ -0.45
NDE1-207ENST00000573203 HMOX1P09601 288 aa12.22□□□□□ -0.45
NDE1-207ENST00000573203 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
NDE1-207ENST00000573203 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
NDE1-207ENST00000573203 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
NDE1-207ENST00000573203 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
NDE1-207ENST00000573203 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
NDE1-207ENST00000573203 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
NDE1-207ENST00000573203 MTFR1LQ9H019 292 aa12.21□□□□□ -0.45
NDE1-207ENST00000573203 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
NDE1-207ENST00000573203 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
NDE1-207ENST00000573203 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
NDE1-207ENST00000573203 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
NDE1-207ENST00000573203 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
NDE1-207ENST00000573203 CABP4P57796 275 aa12.19□□□□□ -0.46
NDE1-207ENST00000573203 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
NDE1-207ENST00000573203 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
NDE1-207ENST00000573203 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
NDE1-207ENST00000573203 C4BP0C0L5 1744 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 PTGER2P43116 358 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 SIK1P57059 783 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
NDE1-207ENST00000573203 AK7Q96M32 723 aa12.17□□□□□ -0.46
NDE1-207ENST00000573203 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
NDE1-207ENST00000573203 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
NDE1-207ENST00000573203 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
NDE1-207ENST00000573203 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
NDE1-207ENST00000573203 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
NDE1-207ENST00000573203 POLD1P28340 1107 aa12.15□□□□□ -0.46
NDE1-207ENST00000573203 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
NDE1-207ENST00000573203 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.46
NDE1-207ENST00000573203 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.46
NDE1-207ENST00000573203 LINC00116Q8NCU8 138 aa12.15□□□□□ -0.46
NDE1-207ENST00000573203 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
NDE1-207ENST00000573203 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
NDE1-207ENST00000573203 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
NDE1-207ENST00000573203 ITPK1Q13572 414 aa12.14□□□□□ -0.47
NDE1-207ENST00000573203 ARXQ96QS3 562 aa12.14□□□□□ -0.47
NDE1-207ENST00000573203 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
NDE1-207ENST00000573203 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
NDE1-207ENST00000573203 PHF14O94880 888 aa12.13□□□□□ -0.47
NDE1-207ENST00000573203 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
NDE1-207ENST00000573203 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
NDE1-207ENST00000573203 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
NDE1-207ENST00000573203 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
NDE1-207ENST00000573203 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
NDE1-207ENST00000573203 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
NDE1-207ENST00000573203 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
NDE1-207ENST00000573203 GNPATO15228 680 aa12.12□□□□□ -0.47
NDE1-207ENST00000573203 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
NDE1-207ENST00000573203 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
NDE1-207ENST00000573203 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
NDE1-207ENST00000573203 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 MRC1P22897 1456 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
NDE1-207ENST00000573203 SSFA2P28290 1259 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 MIER1Q8N108 512 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
NDE1-207ENST00000573203 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
NDE1-207ENST00000573203 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
NDE1-207ENST00000573203 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
NDE1-207ENST00000573203 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
NDE1-207ENST00000573203 FCHSD2O94868 740 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms