RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 MTHFSP49914 203 aa23.56■■□□□ 1.36
LITAF-211ENST00000572255 ITPK1Q13572 414 aa23.56■■□□□ 1.36
LITAF-211ENST00000572255 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
LITAF-211ENST00000572255 PHF14O94880 888 aa23.54■■□□□ 1.36
LITAF-211ENST00000572255 ATP6V1AP38606 617 aa23.54■■□□□ 1.36
LITAF-211ENST00000572255 SMIM5Q71RC9 77 aa23.54■■□□□ 1.36
LITAF-211ENST00000572255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.53■■□□□ 1.36
LITAF-211ENST00000572255 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
LITAF-211ENST00000572255 NLGN2Q8NFZ4 835 aa23.53■■□□□ 1.36
LITAF-211ENST00000572255 CHD4Q14839 1912 aa23.53■■□□□ 1.36
LITAF-211ENST00000572255 ZNF831Q5JPB2 1677 aa23.52■■□□□ 1.36
LITAF-211ENST00000572255 SSFA2P28290 1259 aa23.52■■□□□ 1.36
LITAF-211ENST00000572255 CABP4P57796 275 aa23.52■■□□□ 1.36
LITAF-211ENST00000572255 UTRNP46939 3433 aa23.52■■□□□ 1.36
LITAF-211ENST00000572255 GPR162Q16538 588 aa23.51■■□□□ 1.35
LITAF-211ENST00000572255 GNPATO15228 680 aa23.5■■□□□ 1.35
LITAF-211ENST00000572255 NPC1L1Q9UHC9 1359 aa23.5■■□□□ 1.35
LITAF-211ENST00000572255 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
LITAF-211ENST00000572255 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
LITAF-211ENST00000572255 SCN11AQ9UI33 1791 aa23.49■■□□□ 1.35
LITAF-211ENST00000572255 COL5A3P25940 1745 aaPredicted RBP23.47■■□□□ 1.35
LITAF-211ENST00000572255 HMOX1P09601 288 aa23.47■■□□□ 1.35
LITAF-211ENST00000572255 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
LITAF-211ENST00000572255 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
LITAF-211ENST00000572255 DIAPH1O60610 1272 aaKnown RBP23.46■■□□□ 1.35
LITAF-211ENST00000572255 GOLGB1Q14789 3259 aaKnown RBP23.46■■□□□ 1.35
LITAF-211ENST00000572255 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.34
LITAF-211ENST00000572255 AKAP4Q5JQC9 854 aa23.44■■□□□ 1.34
LITAF-211ENST00000572255 CD2APQ9Y5K6 639 aa23.44■■□□□ 1.34
LITAF-211ENST00000572255 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
LITAF-211ENST00000572255 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
LITAF-211ENST00000572255 CNTNAP4Q9C0A0 1308 aa23.42■■□□□ 1.34
LITAF-211ENST00000572255 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
LITAF-211ENST00000572255 RC3H1Q5TC82 1133 aaKnown RBP23.42■■□□□ 1.34
LITAF-211ENST00000572255 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
LITAF-211ENST00000572255 MYH14Q7Z406 1995 aaKnown RBP23.41■■□□□ 1.34
LITAF-211ENST00000572255 TJP1Q07157 1748 aa23.4■■□□□ 1.34
LITAF-211ENST00000572255 YBX3P16989 372 aaKnown RBP eCLIP23.4■■□□□ 1.34
LITAF-211ENST00000572255 ZNF784Q8NCA9 323 aaPredicted RBP23.4■■□□□ 1.34
LITAF-211ENST00000572255 MRC1P22897 1456 aa23.39■■□□□ 1.34
LITAF-211ENST00000572255 TRAPPC3LQ5T215 181 aa23.39■■□□□ 1.33
LITAF-211ENST00000572255 LGR6Q9HBX8 967 aa23.39■■□□□ 1.33
LITAF-211ENST00000572255 CICQ96RK0 1608 aaPredicted RBP23.39■■□□□ 1.33
LITAF-211ENST00000572255 ADRA2BP18089 450 aa23.38■■□□□ 1.33
LITAF-211ENST00000572255 MTHFSDQ2M296 383 aaKnown RBP23.38■■□□□ 1.33
LITAF-211ENST00000572255 SLC52A2Q9HAB3 445 aa23.38■■□□□ 1.33
LITAF-211ENST00000572255 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
LITAF-211ENST00000572255 RNMTO43148 476 aaKnown RBP23.37■■□□□ 1.33
LITAF-211ENST00000572255 RPS6KA4O75676 772 aa23.37■■□□□ 1.33
LITAF-211ENST00000572255 ARHGEF1Q92888 912 aaKnown RBP23.37■■□□□ 1.33
LITAF-211ENST00000572255 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
LITAF-211ENST00000572255 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
LITAF-211ENST00000572255 GRIN3BO60391 1043 aa23.36■■□□□ 1.33
LITAF-211ENST00000572255 MMP10P09238 476 aa23.35■■□□□ 1.33
LITAF-211ENST00000572255 CRKLP46109 303 aaKnown RBP23.35■■□□□ 1.33
LITAF-211ENST00000572255 RFC4P35249 363 aa23.33■■□□□ 1.33
LITAF-211ENST00000572255 NLGN1Q8N2Q7 840 aa23.33■■□□□ 1.33
LITAF-211ENST00000572255 GYS1P13807 737 aa23.31■■□□□ 1.32
LITAF-211ENST00000572255 SLC39A6Q13433 755 aa23.31■■□□□ 1.32
LITAF-211ENST00000572255 KCPQ6ZWJ8 1503 aa23.31■■□□□ 1.32
LITAF-211ENST00000572255 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
LITAF-211ENST00000572255 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
LITAF-211ENST00000572255 INTS5Q6P9B9 1019 aaKnown RBP23.29■■□□□ 1.32
LITAF-211ENST00000572255 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
LITAF-211ENST00000572255 UBR2Q8IWV8 1755 aa23.28■■□□□ 1.32
LITAF-211ENST00000572255 GAS2L2Q8NHY3 880 aa23.27■■□□□ 1.32
LITAF-211ENST00000572255 CCDC87Q9NVE4 849 aa23.27■■□□□ 1.32
LITAF-211ENST00000572255 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
LITAF-211ENST00000572255 KIAA1551Q9HCM1 1747 aa23.27■■□□□ 1.32
LITAF-211ENST00000572255 C10orf71Q711Q0 1435 aa23.26■■□□□ 1.31
LITAF-211ENST00000572255 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
LITAF-211ENST00000572255 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
LITAF-211ENST00000572255 SRP68Q9UHB9 627 aaKnown RBP23.26■■□□□ 1.31
LITAF-211ENST00000572255 PXDNLA1KZ92 1463 aa23.25■■□□□ 1.31
LITAF-211ENST00000572255 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
LITAF-211ENST00000572255 USP42Q9H9J4 1324 aaKnown RBP23.25■■□□□ 1.31
LITAF-211ENST00000572255 SIPA1L3O60292 1781 aaPredicted RBP23.24■■□□□ 1.31
LITAF-211ENST00000572255 N4BP2Q86UW6 1770 aaPredicted RBP23.24■■□□□ 1.31
LITAF-211ENST00000572255 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
LITAF-211ENST00000572255 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
LITAF-211ENST00000572255 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
LITAF-211ENST00000572255 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
LITAF-211ENST00000572255 PARP3Q9Y6F1 533 aa23.24■■□□□ 1.31
LITAF-211ENST00000572255 TEFQ10587 303 aa23.23■■□□□ 1.31
LITAF-211ENST00000572255 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
LITAF-211ENST00000572255 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
LITAF-211ENST00000572255 SOS1Q07889 1333 aaPredicted RBP23.23■■□□□ 1.31
LITAF-211ENST00000572255 FKBP8Q14318 412 aa23.22■■□□□ 1.31
LITAF-211ENST00000572255 TGFB2P61812 414 aa23.21■■□□□ 1.31
LITAF-211ENST00000572255 TTC5Q8N0Z6 440 aa23.21■■□□□ 1.31
LITAF-211ENST00000572255 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
LITAF-211ENST00000572255 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
LITAF-211ENST00000572255 ZBTB1Q9Y2K1 713 aa23.2■■□□□ 1.3
LITAF-211ENST00000572255 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
LITAF-211ENST00000572255 COL15A1P39059 1388 aa23.18■■□□□ 1.3
LITAF-211ENST00000572255 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
LITAF-211ENST00000572255 ZPR1O75312 459 aa23.18■■□□□ 1.3
LITAF-211ENST00000572255 DDR1Q08345 913 aa23.18■■□□□ 1.3
LITAF-211ENST00000572255 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
LITAF-211ENST00000572255 USPL1Q5W0Q7 1092 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms