RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
TRIM25-204ENST00000570749 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-204ENST00000570749 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-204ENST00000570749 MTHFSP49914 203 aa13.11□□□□□ -0.31
TRIM25-204ENST00000570749 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
TRIM25-204ENST00000570749 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
TRIM25-204ENST00000570749 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
TRIM25-204ENST00000570749 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
TRIM25-204ENST00000570749 ADRA2BP18089 450 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 CABP4P57796 275 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 ASAP1Q9ULH1 1129 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 MRC1P22897 1456 aa13.1□□□□□ -0.31
TRIM25-204ENST00000570749 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
TRIM25-204ENST00000570749 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
TRIM25-204ENST00000570749 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
TRIM25-204ENST00000570749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
TRIM25-204ENST00000570749 AEBP1Q8IUX7 1158 aa13.08□□□□□ -0.32
TRIM25-204ENST00000570749 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
TRIM25-204ENST00000570749 GNPATO15228 680 aa13.07□□□□□ -0.32
TRIM25-204ENST00000570749 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
TRIM25-204ENST00000570749 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
TRIM25-204ENST00000570749 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
TRIM25-204ENST00000570749 TJP1Q07157 1748 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 ITPK1Q13572 414 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 GPR162Q16538 588 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
TRIM25-204ENST00000570749 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
TRIM25-204ENST00000570749 PHF14O94880 888 aa13.05□□□□□ -0.32
TRIM25-204ENST00000570749 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
TRIM25-204ENST00000570749 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
TRIM25-204ENST00000570749 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 GAS2L2Q8NHY3 880 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
TRIM25-204ENST00000570749 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
TRIM25-204ENST00000570749 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
TRIM25-204ENST00000570749 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
TRIM25-204ENST00000570749 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
TRIM25-204ENST00000570749 HMOX1P09601 288 aa13.02□□□□□ -0.33
TRIM25-204ENST00000570749 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
TRIM25-204ENST00000570749 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
TRIM25-204ENST00000570749 RFC4P35249 363 aa13.01□□□□□ -0.33
TRIM25-204ENST00000570749 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
TRIM25-204ENST00000570749 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
TRIM25-204ENST00000570749 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
TRIM25-204ENST00000570749 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
TRIM25-204ENST00000570749 MTHFSDQ2M296 383 aaKnown RBP13□□□□□ -0.33
TRIM25-204ENST00000570749 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
TRIM25-204ENST00000570749 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
TRIM25-204ENST00000570749 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
TRIM25-204ENST00000570749 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
TRIM25-204ENST00000570749 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
TRIM25-204ENST00000570749 TEFQ10587 303 aa12.98□□□□□ -0.33
TRIM25-204ENST00000570749 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
TRIM25-204ENST00000570749 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
TRIM25-204ENST00000570749 CCDC87Q9NVE4 849 aa12.98□□□□□ -0.33
TRIM25-204ENST00000570749 C10orf71Q711Q0 1435 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 MMP10P09238 476 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 GYS1P13807 737 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 TGFB2P61812 414 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 ZNF784Q8NCA9 323 aaPredicted RBP12.97□□□□□ -0.33
TRIM25-204ENST00000570749 TEX13AQ9BXU3 409 aaPredicted RBP12.97□□□□□ -0.33
TRIM25-204ENST00000570749 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
TRIM25-204ENST00000570749 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
TRIM25-204ENST00000570749 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
TRIM25-204ENST00000570749 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
TRIM25-204ENST00000570749 FCHSD2O94868 740 aa12.96□□□□□ -0.33
TRIM25-204ENST00000570749 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
TRIM25-204ENST00000570749 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
TRIM25-204ENST00000570749 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
TRIM25-204ENST00000570749 STARD3NLO95772 234 aa12.95□□□□□ -0.34
TRIM25-204ENST00000570749 NEFMP07197 916 aa12.95□□□□□ -0.34
TRIM25-204ENST00000570749 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
TRIM25-204ENST00000570749 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-204ENST00000570749 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
TRIM25-204ENST00000570749 ZPR1O75312 459 aa12.94□□□□□ -0.34
TRIM25-204ENST00000570749 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-204ENST00000570749 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRIM25-204ENST00000570749 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-204ENST00000570749 COL15A1P39059 1388 aa12.94□□□□□ -0.34
TRIM25-204ENST00000570749 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
TRIM25-204ENST00000570749 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
TRIM25-204ENST00000570749 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
TRIM25-204ENST00000570749 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
TRIM25-204ENST00000570749 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
TRIM25-204ENST00000570749 A0A087WZG4 1122 aa12.92□□□□□ -0.34
TRIM25-204ENST00000570749 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms