RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 POU4F2Q12837 409 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
SIN3A-213ENST00000570021 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
SIN3A-213ENST00000570021 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
SIN3A-213ENST00000570021 CC2D2BQ6DHV5 1058 aa9.38□□□□□ -0.91
SIN3A-213ENST00000570021 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
SIN3A-213ENST00000570021 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
SIN3A-213ENST00000570021 PCDHB9Q9Y5E1 797 aa9.38□□□□□ -0.91
SIN3A-213ENST00000570021 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 OIP5O43482 229 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 RFC5P40937 340 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 TRIM34Q9BYJ4 488 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 GRIP2Q9C0E4 1043 aa9.37□□□□□ -0.91
SIN3A-213ENST00000570021 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
SIN3A-213ENST00000570021 SPATA31C2B4DYI2 1134 aa9.36□□□□□ -0.91
SIN3A-213ENST00000570021 CLN3Q13286 438 aa9.36□□□□□ -0.91
SIN3A-213ENST00000570021 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
SIN3A-213ENST00000570021 MAP2K3P46734 347 aa9.35□□□□□ -0.91
SIN3A-213ENST00000570021 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
SIN3A-213ENST00000570021 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
SIN3A-213ENST00000570021 OXCT2Q9BYC2 517 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-213ENST00000570021 CLASP1Q7Z460 1538 aa9.35□□□□□ -0.91
SIN3A-213ENST00000570021 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
SIN3A-213ENST00000570021 F11P03951 625 aa9.34□□□□□ -0.91
SIN3A-213ENST00000570021 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
SIN3A-213ENST00000570021 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
SIN3A-213ENST00000570021 FBXO45P0C2W1 286 aa9.33□□□□□ -0.92
SIN3A-213ENST00000570021 TAS1R3Q7RTX0 852 aa9.33□□□□□ -0.92
SIN3A-213ENST00000570021 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-213ENST00000570021 WASLO00401 505 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-213ENST00000570021 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
SIN3A-213ENST00000570021 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
SIN3A-213ENST00000570021 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
SIN3A-213ENST00000570021 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
SIN3A-213ENST00000570021 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
SIN3A-213ENST00000570021 ARHGEF10LQ9HCE6 1279 aa9.31□□□□□ -0.92
SIN3A-213ENST00000570021 MKL2Q9ULH7 1088 aa9.31□□□□□ -0.92
SIN3A-213ENST00000570021 TOP2AP11388 1531 aaKnown RBP9.31□□□□□ -0.92
SIN3A-213ENST00000570021 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
SIN3A-213ENST00000570021 KRBA1A5PL33 1030 aa9.3□□□□□ -0.92
SIN3A-213ENST00000570021 SCTRP47872 440 aa9.3□□□□□ -0.92
SIN3A-213ENST00000570021 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
SIN3A-213ENST00000570021 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
SIN3A-213ENST00000570021 POLA1P09884 1462 aaPredicted RBP9.29□□□□□ -0.92
SIN3A-213ENST00000570021 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 TRAK2O60296 914 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 BAG6P46379 1132 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
SIN3A-213ENST00000570021 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
SIN3A-213ENST00000570021 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
SIN3A-213ENST00000570021 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
SIN3A-213ENST00000570021 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
SIN3A-213ENST00000570021 PSMG3-AS1Q96PY0 264 aa9.28□□□□□ -0.92
SIN3A-213ENST00000570021 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
SIN3A-213ENST00000570021 PCDHB11Q9Y5F2 797 aa9.28□□□□□ -0.92
SIN3A-213ENST00000570021 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
SIN3A-213ENST00000570021 THBS1P07996 1170 aa9.27□□□□□ -0.93
SIN3A-213ENST00000570021 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
SIN3A-213ENST00000570021 GJD4Q96KN9 370 aaPredicted RBP9.27□□□□□ -0.93
SIN3A-213ENST00000570021 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
SIN3A-213ENST00000570021 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
SIN3A-213ENST00000570021 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
SIN3A-213ENST00000570021 GPAMQ9HCL2 828 aa9.26□□□□□ -0.93
SIN3A-213ENST00000570021 ERCC6L2Q5T890 1561 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 SOGA1O94964 1423 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 A0A1B0GTH6 734 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 GNRH1P01148 92 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 COL8A1P27658 744 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 NR1H3Q13133 447 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 ESYT1Q9BSJ8 1104 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
SIN3A-213ENST00000570021 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
SIN3A-213ENST00000570021 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SIN3A-213ENST00000570021 GOLGA6L1Q8N7Z2 621 aa9.24□□□□□ -0.93
SIN3A-213ENST00000570021 CNKSR1Q969H4 720 aa9.24□□□□□ -0.93
SIN3A-213ENST00000570021 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-213ENST00000570021 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
SIN3A-213ENST00000570021 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-213ENST00000570021 PHKA2P46019 1235 aa9.23□□□□□ -0.93
SIN3A-213ENST00000570021 CENPCQ03188 943 aa9.23□□□□□ -0.93
SIN3A-213ENST00000570021 IL2RAP01589 272 aa9.22□□□□□ -0.93
SIN3A-213ENST00000570021 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
SIN3A-213ENST00000570021 UBAP2LQ14157 1087 aaKnown RBP9.22□□□□□ -0.93
SIN3A-213ENST00000570021 PGBD3Q8N328 593 aa9.22□□□□□ -0.93
SIN3A-213ENST00000570021 ZSCAN10Q96SZ4 725 aaPredicted RBP9.22□□□□□ -0.93
SIN3A-213ENST00000570021 FURINP09958 794 aa9.21□□□□□ -0.94
SIN3A-213ENST00000570021 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
SIN3A-213ENST00000570021 Q8N3U1 123 aa9.21□□□□□ -0.94
SIN3A-213ENST00000570021 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
SIN3A-213ENST00000570021 PIK3R2O00459 728 aa9.2□□□□□ -0.94
SIN3A-213ENST00000570021 BMP4P12644 408 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms