RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
CHD9-219ENST00000569225 DEFB132Q7Z7B7 95 aa11.94□□□□□ -0.5
CHD9-219ENST00000569225 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
CHD9-219ENST00000569225 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
CHD9-219ENST00000569225 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
CHD9-219ENST00000569225 BTBD11A6QL63 1104 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 ASAP1Q9ULH1 1129 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CHD9-219ENST00000569225 TNS1Q9HBL0 1735 aaKnown RBP11.93□□□□□ -0.5
CHD9-219ENST00000569225 SBF2Q86WG5 1849 aa11.92□□□□□ -0.5
CHD9-219ENST00000569225 TXNRD1Q16881 649 aa11.92□□□□□ -0.5
CHD9-219ENST00000569225 THUMPD2Q9BTF0 503 aaKnown RBP11.92□□□□□ -0.5
CHD9-219ENST00000569225 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
CHD9-219ENST00000569225 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
CHD9-219ENST00000569225 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
CHD9-219ENST00000569225 SCN11AQ9UI33 1791 aa11.91□□□□□ -0.5
CHD9-219ENST00000569225 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
CHD9-219ENST00000569225 SIK1P57059 783 aa11.91□□□□□ -0.5
CHD9-219ENST00000569225 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
CHD9-219ENST00000569225 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
CHD9-219ENST00000569225 BTAF1O14981 1849 aa11.91□□□□□ -0.5
CHD9-219ENST00000569225 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
CHD9-219ENST00000569225 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
CHD9-219ENST00000569225 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
CHD9-219ENST00000569225 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
CHD9-219ENST00000569225 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 GNAI1P63096 354 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
CHD9-219ENST00000569225 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
CHD9-219ENST00000569225 IL16Q14005 1332 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 ITGB4P16144 1822 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 PROM2Q8N271 834 aa11.88□□□□□ -0.51
CHD9-219ENST00000569225 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
CHD9-219ENST00000569225 CHL1O00533 1208 aa11.87□□□□□ -0.51
CHD9-219ENST00000569225 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
CHD9-219ENST00000569225 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
CHD9-219ENST00000569225 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
CHD9-219ENST00000569225 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
CHD9-219ENST00000569225 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
CHD9-219ENST00000569225 DLG5Q8TDM6 1919 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 KCNQ3O43525 872 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 STARD3NLO95772 234 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 SNRPA1P09661 255 aaKnown RBP11.85□□□□□ -0.51
CHD9-219ENST00000569225 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 KCNQ4P56696 695 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
CHD9-219ENST00000569225 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHD9-219ENST00000569225 ITPK1Q13572 414 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
CHD9-219ENST00000569225 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
CHD9-219ENST00000569225 AK7Q96M32 723 aa11.84□□□□□ -0.51
CHD9-219ENST00000569225 SLC4A9Q96Q91 983 aa11.84□□□□□ -0.51
CHD9-219ENST00000569225 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
CHD9-219ENST00000569225 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 LY75O60449 1722 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
CHD9-219ENST00000569225 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
CHD9-219ENST00000569225 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 RREB1Q92766 1687 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 E9PSI1 815 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 CHMP4AQ9BY43 222 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
CHD9-219ENST00000569225 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
CHD9-219ENST00000569225 HOXB7P09629 217 aa11.81□□□□□ -0.52
CHD9-219ENST00000569225 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
CHD9-219ENST00000569225 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
CHD9-219ENST00000569225 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
CHD9-219ENST00000569225 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
CHD9-219ENST00000569225 GNPATO15228 680 aa11.8□□□□□ -0.52
CHD9-219ENST00000569225 CRKLP46109 303 aaKnown RBP11.8□□□□□ -0.52
CHD9-219ENST00000569225 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
CHD9-219ENST00000569225 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
CHD9-219ENST00000569225 SOS1Q07889 1333 aaPredicted RBP11.8□□□□□ -0.52
CHD9-219ENST00000569225 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
CHD9-219ENST00000569225 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
CHD9-219ENST00000569225 UBR2Q8IWV8 1755 aa11.8□□□□□ -0.52
CHD9-219ENST00000569225 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
CHD9-219ENST00000569225 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
CHD9-219ENST00000569225 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms