RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
FANCA-232ENST00000568983 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
FANCA-232ENST00000568983 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
FANCA-232ENST00000568983 RTCBQ9Y3I0 505 aaKnown RBP16.62■□□□□ 0.25
FANCA-232ENST00000568983 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
FANCA-232ENST00000568983 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
FANCA-232ENST00000568983 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
FANCA-232ENST00000568983 HSPA6P17066 643 aa16.6■□□□□ 0.25
FANCA-232ENST00000568983 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
FANCA-232ENST00000568983 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
FANCA-232ENST00000568983 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
FANCA-232ENST00000568983 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
FANCA-232ENST00000568983 KDRP35968 1356 aa16.59■□□□□ 0.25
FANCA-232ENST00000568983 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
FANCA-232ENST00000568983 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
FANCA-232ENST00000568983 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
FANCA-232ENST00000568983 IFFO2Q5TF58 517 aa16.58■□□□□ 0.24
FANCA-232ENST00000568983 NLGN1Q8N2Q7 840 aa16.58■□□□□ 0.24
FANCA-232ENST00000568983 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
FANCA-232ENST00000568983 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.24
FANCA-232ENST00000568983 C4AP0C0L4 1744 aa16.57■□□□□ 0.24
FANCA-232ENST00000568983 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
FANCA-232ENST00000568983 RFC4P35249 363 aa16.57■□□□□ 0.24
FANCA-232ENST00000568983 CABP4P57796 275 aa16.57■□□□□ 0.24
FANCA-232ENST00000568983 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
FANCA-232ENST00000568983 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
FANCA-232ENST00000568983 CCDC87Q9NVE4 849 aa16.57■□□□□ 0.24
FANCA-232ENST00000568983 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
FANCA-232ENST00000568983 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
FANCA-232ENST00000568983 ADRA2BP18089 450 aa16.56■□□□□ 0.24
FANCA-232ENST00000568983 TGFB2P61812 414 aa16.56■□□□□ 0.24
FANCA-232ENST00000568983 PARP3Q9Y6F1 533 aa16.56■□□□□ 0.24
FANCA-232ENST00000568983 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
FANCA-232ENST00000568983 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
FANCA-232ENST00000568983 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
FANCA-232ENST00000568983 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
FANCA-232ENST00000568983 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
FANCA-232ENST00000568983 AMOTQ4VCS5 1084 aa16.54■□□□□ 0.24
FANCA-232ENST00000568983 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
FANCA-232ENST00000568983 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
FANCA-232ENST00000568983 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
FANCA-232ENST00000568983 FCHSD2O94868 740 aa16.53■□□□□ 0.24
FANCA-232ENST00000568983 MTHFSP49914 203 aa16.53■□□□□ 0.24
FANCA-232ENST00000568983 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
FANCA-232ENST00000568983 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
FANCA-232ENST00000568983 KIF3CO14782 793 aa16.52■□□□□ 0.24
FANCA-232ENST00000568983 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
FANCA-232ENST00000568983 GYS1P13807 737 aa16.52■□□□□ 0.24
FANCA-232ENST00000568983 DPEP1P16444 411 aa16.52■□□□□ 0.24
FANCA-232ENST00000568983 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.23
FANCA-232ENST00000568983 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
FANCA-232ENST00000568983 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
FANCA-232ENST00000568983 PANK3Q9H999 370 aa16.51■□□□□ 0.23
FANCA-232ENST00000568983 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
FANCA-232ENST00000568983 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
FANCA-232ENST00000568983 APLP1P51693 650 aa16.49■□□□□ 0.23
FANCA-232ENST00000568983 TJP1Q07157 1748 aa16.49■□□□□ 0.23
FANCA-232ENST00000568983 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
FANCA-232ENST00000568983 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
FANCA-232ENST00000568983 TOMM70O94826 608 aa16.48■□□□□ 0.23
FANCA-232ENST00000568983 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
FANCA-232ENST00000568983 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
FANCA-232ENST00000568983 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
FANCA-232ENST00000568983 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
FANCA-232ENST00000568983 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
FANCA-232ENST00000568983 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
FANCA-232ENST00000568983 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
FANCA-232ENST00000568983 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
FANCA-232ENST00000568983 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
FANCA-232ENST00000568983 C9orf131Q5VYM1 1079 aa16.46■□□□□ 0.23
FANCA-232ENST00000568983 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
FANCA-232ENST00000568983 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.22
FANCA-232ENST00000568983 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
FANCA-232ENST00000568983 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
FANCA-232ENST00000568983 ZPR1O75312 459 aa16.44■□□□□ 0.22
FANCA-232ENST00000568983 FKBP8Q14318 412 aa16.44■□□□□ 0.22
FANCA-232ENST00000568983 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
FANCA-232ENST00000568983 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
FANCA-232ENST00000568983 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
FANCA-232ENST00000568983 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
FANCA-232ENST00000568983 CHRNA5P30532 468 aa16.42■□□□□ 0.22
FANCA-232ENST00000568983 DDR1Q08345 913 aa16.42■□□□□ 0.22
FANCA-232ENST00000568983 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
FANCA-232ENST00000568983 KCNA3P22001 575 aa16.41■□□□□ 0.22
FANCA-232ENST00000568983 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
FANCA-232ENST00000568983 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
FANCA-232ENST00000568983 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
FANCA-232ENST00000568983 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
FANCA-232ENST00000568983 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
FANCA-232ENST00000568983 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
FANCA-232ENST00000568983 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
FANCA-232ENST00000568983 IL13P35225 146 aa16.39■□□□□ 0.21
FANCA-232ENST00000568983 INTS5Q6P9B9 1019 aaKnown RBP16.39■□□□□ 0.21
FANCA-232ENST00000568983 ADAMTS7Q9UKP4 1686 aa16.39■□□□□ 0.21
FANCA-232ENST00000568983 COL15A1P39059 1388 aa16.38■□□□□ 0.21
FANCA-232ENST00000568983 MRC1P22897 1456 aa16.38■□□□□ 0.21
FANCA-232ENST00000568983 HMOX1P09601 288 aa16.38■□□□□ 0.21
FANCA-232ENST00000568983 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
FANCA-232ENST00000568983 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
FANCA-232ENST00000568983 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms