RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 NLGN2Q8NFZ4 835 aa25.75■■□□□ 1.71
SPSB3-210ENST00000568416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.74■■□□□ 1.71
SPSB3-210ENST00000568416 ATP6V1AP38606 617 aa25.74■■□□□ 1.71
SPSB3-210ENST00000568416 PHF14O94880 888 aa25.73■■□□□ 1.71
SPSB3-210ENST00000568416 SSFA2P28290 1259 aa25.73■■□□□ 1.71
SPSB3-210ENST00000568416 SMIM5Q71RC9 77 aa25.73■■□□□ 1.71
SPSB3-210ENST00000568416 MTHFSP49914 203 aa25.72■■□□□ 1.71
SPSB3-210ENST00000568416 GPR162Q16538 588 aa25.72■■□□□ 1.71
SPSB3-210ENST00000568416 UBR3Q6ZT12 1888 aa25.72■■□□□ 1.71
SPSB3-210ENST00000568416 C1orf141Q5JVX7 400 aa25.71■■□□□ 1.71
SPSB3-210ENST00000568416 SLC4A9Q96Q91 983 aa25.71■■□□□ 1.71
SPSB3-210ENST00000568416 CABP4P57796 275 aa25.7■■□□□ 1.7
SPSB3-210ENST00000568416 CC2D1BQ5T0F9 858 aaKnown RBP25.69■■□□□ 1.7
SPSB3-210ENST00000568416 GNPATO15228 680 aa25.68■■□□□ 1.7
SPSB3-210ENST00000568416 NPC1L1Q9UHC9 1359 aa25.68■■□□□ 1.7
SPSB3-210ENST00000568416 ZNF831Q5JPB2 1677 aa25.68■■□□□ 1.7
SPSB3-210ENST00000568416 RBM42Q9BTD8 480 aaKnown RBP25.67■■□□□ 1.7
SPSB3-210ENST00000568416 CD2APQ9Y5K6 639 aa25.66■■□□□ 1.7
SPSB3-210ENST00000568416 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
SPSB3-210ENST00000568416 AKAP4Q5JQC9 854 aa25.64■■□□□ 1.7
SPSB3-210ENST00000568416 ZNF784Q8NCA9 323 aaPredicted RBP25.64■■□□□ 1.7
SPSB3-210ENST00000568416 DIAPH1O60610 1272 aaKnown RBP25.63■■□□□ 1.69
SPSB3-210ENST00000568416 RC3H1Q5TC82 1133 aaKnown RBP25.63■■□□□ 1.69
SPSB3-210ENST00000568416 NFATC2IPQ8NCF5 419 aa25.63■■□□□ 1.69
SPSB3-210ENST00000568416 HMOX1P09601 288 aa25.62■■□□□ 1.69
SPSB3-210ENST00000568416 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
SPSB3-210ENST00000568416 CNTNAP4Q9C0A0 1308 aa25.62■■□□□ 1.69
SPSB3-210ENST00000568416 RTCBQ9Y3I0 505 aaKnown RBP25.61■■□□□ 1.69
SPSB3-210ENST00000568416 COL5A3P25940 1745 aaPredicted RBP25.6■■□□□ 1.69
SPSB3-210ENST00000568416 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
SPSB3-210ENST00000568416 TRAPPC3LQ5T215 181 aa25.59■■□□□ 1.69
SPSB3-210ENST00000568416 GRIN3BO60391 1043 aa25.58■■□□□ 1.69
SPSB3-210ENST00000568416 PTCD1O75127 700 aaKnown RBP25.58■■□□□ 1.69
SPSB3-210ENST00000568416 CHD4Q14839 1912 aa25.57■■□□□ 1.68
SPSB3-210ENST00000568416 RPS6KA4O75676 772 aa25.57■■□□□ 1.68
SPSB3-210ENST00000568416 ADRA2BP18089 450 aa25.57■■□□□ 1.68
SPSB3-210ENST00000568416 LGR6Q9HBX8 967 aa25.57■■□□□ 1.68
SPSB3-210ENST00000568416 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
SPSB3-210ENST00000568416 MRC1P22897 1456 aa25.56■■□□□ 1.68
SPSB3-210ENST00000568416 MTHFSDQ2M296 383 aaKnown RBP25.56■■□□□ 1.68
SPSB3-210ENST00000568416 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
SPSB3-210ENST00000568416 SLC52A2Q9HAB3 445 aa25.56■■□□□ 1.68
SPSB3-210ENST00000568416 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
SPSB3-210ENST00000568416 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
SPSB3-210ENST00000568416 CICQ96RK0 1608 aaPredicted RBP25.55■■□□□ 1.68
SPSB3-210ENST00000568416 MMP10P09238 476 aa25.53■■□□□ 1.68
SPSB3-210ENST00000568416 TJP1Q07157 1748 aa25.52■■□□□ 1.68
SPSB3-210ENST00000568416 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
SPSB3-210ENST00000568416 NLGN1Q8N2Q7 840 aa25.52■■□□□ 1.68
SPSB3-210ENST00000568416 UTRNP46939 3433 aa25.52■■□□□ 1.68
SPSB3-210ENST00000568416 ADAMTS7Q9UKP4 1686 aa25.52■■□□□ 1.68
SPSB3-210ENST00000568416 GYS1P13807 737 aa25.51■■□□□ 1.67
SPSB3-210ENST00000568416 RFC4P35249 363 aa25.5■■□□□ 1.67
SPSB3-210ENST00000568416 U2SURPO15042 1029 aaKnown RBP25.49■■□□□ 1.67
SPSB3-210ENST00000568416 SLC39A6Q13433 755 aa25.47■■□□□ 1.67
SPSB3-210ENST00000568416 INTS5Q6P9B9 1019 aaKnown RBP25.47■■□□□ 1.67
SPSB3-210ENST00000568416 DNAJC10Q8IXB1 793 aa25.47■■□□□ 1.67
SPSB3-210ENST00000568416 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
SPSB3-210ENST00000568416 KCPQ6ZWJ8 1503 aa25.46■■□□□ 1.67
SPSB3-210ENST00000568416 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
SPSB3-210ENST00000568416 C10orf71Q711Q0 1435 aa25.45■■□□□ 1.66
SPSB3-210ENST00000568416 USP42Q9H9J4 1324 aaKnown RBP25.44■■□□□ 1.66
SPSB3-210ENST00000568416 PXDNLA1KZ92 1463 aa25.44■■□□□ 1.66
SPSB3-210ENST00000568416 GAS2L2Q8NHY3 880 aa25.43■■□□□ 1.66
SPSB3-210ENST00000568416 CFAP53Q96M91 514 aa25.43■■□□□ 1.66
SPSB3-210ENST00000568416 CCDC87Q9NVE4 849 aa25.43■■□□□ 1.66
SPSB3-210ENST00000568416 SRP68Q9UHB9 627 aaKnown RBP25.43■■□□□ 1.66
SPSB3-210ENST00000568416 WWC3Q9ULE0 1092 aa25.43■■□□□ 1.66
SPSB3-210ENST00000568416 CYP19A1P11511 503 aaPredicted RBP25.42■■□□□ 1.66
SPSB3-210ENST00000568416 TGFB2P61812 414 aa25.42■■□□□ 1.66
SPSB3-210ENST00000568416 PARP3Q9Y6F1 533 aa25.42■■□□□ 1.66
SPSB3-210ENST00000568416 KIF13BQ9NQT8 1826 aa25.42■■□□□ 1.66
SPSB3-210ENST00000568416 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
SPSB3-210ENST00000568416 VSIG10Q8N0Z9 540 aa25.41■■□□□ 1.66
SPSB3-210ENST00000568416 IL17REQ8NFR9 667 aa25.41■■□□□ 1.66
SPSB3-210ENST00000568416 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
SPSB3-210ENST00000568416 SOS1Q07889 1333 aaPredicted RBP25.4■■□□□ 1.66
SPSB3-210ENST00000568416 GNAT3A8MTJ3 354 aa25.4■■□□□ 1.66
SPSB3-210ENST00000568416 FKBP8Q14318 412 aa25.4■■□□□ 1.66
SPSB3-210ENST00000568416 RSPH6AQ9H0K4 717 aa25.39■■□□□ 1.66
SPSB3-210ENST00000568416 VIRMAQ69YN4 1812 aaKnown RBP25.39■■□□□ 1.65
SPSB3-210ENST00000568416 PRKAR2BP31323 418 aa25.38■■□□□ 1.65
SPSB3-210ENST00000568416 PHACTR3Q96KR7 559 aa25.37■■□□□ 1.65
SPSB3-210ENST00000568416 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 ADCY9O60503 1353 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 A0A0G2JLW4 131 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 C1QTNF8P60827 252 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 DDR1Q08345 913 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 TEFQ10587 303 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 NUDCQ9Y266 331 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 ZBTB1Q9Y2K1 713 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 ATP10DQ9P241 1426 aa25.36■■□□□ 1.65
SPSB3-210ENST00000568416 CEMIPQ8WUJ3 1361 aa25.35■■□□□ 1.65
SPSB3-210ENST00000568416 TM4SF1P30408 202 aa25.35■■□□□ 1.65
SPSB3-210ENST00000568416 USPL1Q5W0Q7 1092 aa25.35■■□□□ 1.65
SPSB3-210ENST00000568416 TTC5Q8N0Z6 440 aa25.35■■□□□ 1.65
SPSB3-210ENST00000568416 GOLGB1Q14789 3259 aaKnown RBP25.34■■□□□ 1.65
SPSB3-210ENST00000568416 COL15A1P39059 1388 aa25.34■■□□□ 1.65
SPSB3-210ENST00000568416 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
SPSB3-210ENST00000568416 DPEP1P16444 411 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms