RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SLC4A9Q96Q91 983 aa33.9■■■■□ 3.02
FANCA-228ENST00000567943 CABP4P57796 275 aa33.89■■■■□ 3.02
FANCA-228ENST00000567943 ZNF831Q5JPB2 1677 aa33.88■■■■□ 3.01
FANCA-228ENST00000567943 MTHFSDQ2M296 383 aaKnown RBP33.88■■■■□ 3.01
FANCA-228ENST00000567943 AKAP4Q5JQC9 854 aa33.88■■■■□ 3.01
FANCA-228ENST00000567943 ADAMTS7Q9UKP4 1686 aa33.87■■■■□ 3.01
FANCA-228ENST00000567943 U2SURPO15042 1029 aaKnown RBP33.86■■■■□ 3.01
FANCA-228ENST00000567943 ATP6V1AP38606 617 aa33.86■■■■□ 3.01
FANCA-228ENST00000567943 SMIM5Q71RC9 77 aa33.86■■■■□ 3.01
FANCA-228ENST00000567943 NFATC2IPQ8NCF5 419 aa33.86■■■■□ 3.01
FANCA-228ENST00000567943 ARXQ96QS3 562 aa33.85■■■■□ 3.01
FANCA-228ENST00000567943 FHDC1Q9C0D6 1143 aaPredicted RBP33.85■■■■□ 3.01
FANCA-228ENST00000567943 LGR6Q9HBX8 967 aa33.85■■■■□ 3.01
FANCA-228ENST00000567943 UTRNP46939 3433 aa33.84■■■■□ 3.01
FANCA-228ENST00000567943 COL5A3P25940 1745 aaPredicted RBP33.83■■■■□ 3.01
FANCA-228ENST00000567943 HMGB2P26583 209 aaKnown RBP33.83■■■■□ 3.01
FANCA-228ENST00000567943 DDX10Q13206 875 aaKnown RBP33.83■■■■□ 3.01
FANCA-228ENST00000567943 AK7Q96M32 723 aa33.82■■■■□ 3
FANCA-228ENST00000567943 SYT17Q9BSW7 474 aa33.82■■■■□ 3
FANCA-228ENST00000567943 MSH5O43196 834 aa33.81■■■■□ 3
FANCA-228ENST00000567943 CFAP53Q96M91 514 aa33.81■■■■□ 3
FANCA-228ENST00000567943 MRC1P22897 1456 aa33.81■■■■□ 3
FANCA-228ENST00000567943 RNMTO43148 476 aaKnown RBP33.79■■■■□ 3
FANCA-228ENST00000567943 RBM42Q9BTD8 480 aaKnown RBP33.79■■■■□ 3
FANCA-228ENST00000567943 FLAD1Q8NFF5 587 aa33.78■■■■□ 3
FANCA-228ENST00000567943 MYH14Q7Z406 1995 aaKnown RBP33.78■■■■□ 3
FANCA-228ENST00000567943 RSPH6AQ9H0K4 717 aa33.77■■■■□ 3
FANCA-228ENST00000567943 SLC52A2Q9HAB3 445 aa33.77■■■■□ 3
FANCA-228ENST00000567943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.76■■■□□ 2.99
FANCA-228ENST00000567943 MSL1Q68DK7 614 aa33.76■■■□□ 2.99
FANCA-228ENST00000567943 MAP3K5Q99683 1374 aa33.75■■■□□ 2.99
FANCA-228ENST00000567943 PHF14O94880 888 aa33.75■■■□□ 2.99
FANCA-228ENST00000567943 PHACTR3Q96KR7 559 aa33.75■■■□□ 2.99
FANCA-228ENST00000567943 GOLGB1Q14789 3259 aaKnown RBP33.75■■■□□ 2.99
FANCA-228ENST00000567943 TJP1Q07157 1748 aa33.75■■■□□ 2.99
FANCA-228ENST00000567943 PTCD1O75127 700 aaKnown RBP33.74■■■□□ 2.99
FANCA-228ENST00000567943 POLD1P28340 1107 aa33.74■■■□□ 2.99
FANCA-228ENST00000567943 CICQ96RK0 1608 aaPredicted RBP33.73■■■□□ 2.99
FANCA-228ENST00000567943 GNPATO15228 680 aa33.73■■■□□ 2.99
FANCA-228ENST00000567943 SSFA2P28290 1259 aa33.73■■■□□ 2.99
FANCA-228ENST00000567943 PRKAR2BP31323 418 aa33.71■■■□□ 2.99
FANCA-228ENST00000567943 NUDCQ9Y266 331 aa33.7■■■□□ 2.99
FANCA-228ENST00000567943 IL17REQ8NFR9 667 aa33.69■■■□□ 2.98
FANCA-228ENST00000567943 SIPA1L3O60292 1781 aaPredicted RBP33.69■■■□□ 2.98
FANCA-228ENST00000567943 SLC39A6Q13433 755 aa33.68■■■□□ 2.98
FANCA-228ENST00000567943 RC3H1Q5TC82 1133 aaKnown RBP33.68■■■□□ 2.98
FANCA-228ENST00000567943 GAS2L2Q8NHY3 880 aa33.68■■■□□ 2.98
FANCA-228ENST00000567943 CNTNAP4Q9C0A0 1308 aa33.68■■■□□ 2.98
FANCA-228ENST00000567943 U2AF1L5P0DN76 240 aaPredicted RBP33.67■■■□□ 2.98
FANCA-228ENST00000567943 U2AF1Q01081 240 aaKnown RBP eCLIP33.67■■■□□ 2.98
FANCA-228ENST00000567943 KCPQ6ZWJ8 1503 aa33.67■■■□□ 2.98
FANCA-228ENST00000567943 UBR2Q8IWV8 1755 aa33.66■■■□□ 2.98
FANCA-228ENST00000567943 GNAT3A8MTJ3 354 aa33.65■■■□□ 2.98
FANCA-228ENST00000567943 FCHSD2O94868 740 aa33.63■■■□□ 2.97
FANCA-228ENST00000567943 RTCBQ9Y3I0 505 aaKnown RBP33.63■■■□□ 2.97
FANCA-228ENST00000567943 C4AP0C0L4 1744 aa33.62■■■□□ 2.97
FANCA-228ENST00000567943 RALBP1Q15311 655 aa33.62■■■□□ 2.97
FANCA-228ENST00000567943 KLHL34Q8N239 644 aa33.62■■■□□ 2.97
FANCA-228ENST00000567943 RPS6KA4O75676 772 aa33.61■■■□□ 2.97
FANCA-228ENST00000567943 NLGN2Q8NFZ4 835 aa33.61■■■□□ 2.97
FANCA-228ENST00000567943 CEMIPQ8WUJ3 1361 aa33.6■■■□□ 2.97
FANCA-228ENST00000567943 CRKLP46109 303 aaKnown RBP33.6■■■□□ 2.97
FANCA-228ENST00000567943 TRAPPC3LQ5T215 181 aa33.59■■■□□ 2.97
FANCA-228ENST00000567943 DNAJC10Q8IXB1 793 aa33.59■■■□□ 2.97
FANCA-228ENST00000567943 ARHGEF1Q92888 912 aaKnown RBP33.59■■■□□ 2.97
FANCA-228ENST00000567943 INTS5Q6P9B9 1019 aaKnown RBP33.58■■■□□ 2.97
FANCA-228ENST00000567943 DCAF8L1A6NGE4 600 aa33.55■■■□□ 2.96
FANCA-228ENST00000567943 ADRA2BP18089 450 aa33.55■■■□□ 2.96
FANCA-228ENST00000567943 TEFQ10587 303 aa33.54■■■□□ 2.96
FANCA-228ENST00000567943 CYP19A1P11511 503 aaPredicted RBP33.53■■■□□ 2.96
FANCA-228ENST00000567943 DLG5Q8TDM6 1919 aa33.52■■■□□ 2.96
FANCA-228ENST00000567943 ZNF790Q6PG37 636 aa33.5■■■□□ 2.95
FANCA-228ENST00000567943 VSIG10Q8N0Z9 540 aa33.5■■■□□ 2.95
FANCA-228ENST00000567943 PLEKHF1Q96S99 279 aa33.5■■■□□ 2.95
FANCA-228ENST00000567943 CD2APQ9Y5K6 639 aa33.5■■■□□ 2.95
FANCA-228ENST00000567943 GYS1P13807 737 aa33.49■■■□□ 2.95
FANCA-228ENST00000567943 RFC4P35249 363 aa33.49■■■□□ 2.95
FANCA-228ENST00000567943 ZNF496Q96IT1 587 aaPredicted RBP33.49■■■□□ 2.95
FANCA-228ENST00000567943 CCDC87Q9NVE4 849 aa33.49■■■□□ 2.95
FANCA-228ENST00000567943 MYBBP1AQ9BQG0 1328 aaKnown RBP33.49■■■□□ 2.95
FANCA-228ENST00000567943 MCM10Q7L590 875 aa33.48■■■□□ 2.95
FANCA-228ENST00000567943 ZNF316A6NFI3 1004 aaPredicted RBP33.47■■■□□ 2.95
FANCA-228ENST00000567943 KCNQ3O43525 872 aa33.47■■■□□ 2.95
FANCA-228ENST00000567943 MMP10P09238 476 aa33.47■■■□□ 2.95
FANCA-228ENST00000567943 TTC5Q8N0Z6 440 aa33.47■■■□□ 2.95
FANCA-228ENST00000567943 DCTN1Q14203 1278 aa33.46■■■□□ 2.95
FANCA-228ENST00000567943 SRP68Q9UHB9 627 aaKnown RBP33.46■■■□□ 2.95
FANCA-228ENST00000567943 SOS1Q07889 1333 aaPredicted RBP33.46■■■□□ 2.95
FANCA-228ENST00000567943 NLGN1Q8N2Q7 840 aa33.45■■■□□ 2.95
FANCA-228ENST00000567943 CHD4Q14839 1912 aa33.44■■■□□ 2.94
FANCA-228ENST00000567943 YY1P25490 414 aa33.44■■■□□ 2.94
FANCA-228ENST00000567943 ZBTB1Q9Y2K1 713 aa33.44■■■□□ 2.94
FANCA-228ENST00000567943 HEG1Q9ULI3 1381 aa33.44■■■□□ 2.94
FANCA-228ENST00000567943 KIF13BQ9NQT8 1826 aa33.43■■■□□ 2.94
FANCA-228ENST00000567943 USP42Q9H9J4 1324 aaKnown RBP33.43■■■□□ 2.94
FANCA-228ENST00000567943 BTBD11A6QL63 1104 aa33.42■■■□□ 2.94
FANCA-228ENST00000567943 HTATSF1O43719 755 aaKnown RBP33.42■■■□□ 2.94
FANCA-228ENST00000567943 GPR162Q16538 588 aa33.42■■■□□ 2.94
FANCA-228ENST00000567943 RTF1Q92541 710 aaKnown RBP33.42■■■□□ 2.94
FANCA-228ENST00000567943 PRKRIP1Q9H875 184 aaPredicted RBP33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms