RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 TMOD3Q9NYL9 352 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 DEPDC5O75140 1603 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 NEXMIFQ5QGS0 1516 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 NUCB2P80303 420 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 PAXIP1Q6ZW49 1069 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 CGNQ9P2M7 1197 aaKnown RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 SLC39A6Q13433 755 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 DDX11Q96FC9 970 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 PRIMPOLQ96LW4 560 aa7.17□□□□□ -1.26
CNOT1-211ENST00000567188 NOB1Q9ULX3 412 aaKnown RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 GNAT3A8MTJ3 354 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 E9PSI1 815 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 HOXC9P31274 260 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 PLA2R1Q13018 1463 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 TMEM131LA2VDJ0 1609 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 CDC42BPGQ6DT37 1551 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 KIF2AO00139 706 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-211ENST00000567188 MBD3O95983 291 aa7.16□□□□□ -1.26
CNOT1-211ENST00000567188 LIG1P18858 919 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 HSPA1LP34931 641 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 KCNJ4P48050 445 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 PANK1Q8TE04 598 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 GRPEL1Q9HAV7 217 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 BRD4O60885 1362 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-211ENST00000567188 GOLGA6L10A6NI86 522 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 EXOSC9Q06265 439 aaKnown RBP7.15□□□□□ -1.26
CNOT1-211ENST00000567188 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 CCDC94Q9BW85 323 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-211ENST00000567188 EIF3JO75822 258 aaKnown RBP7.15□□□□□ -1.26
CNOT1-211ENST00000567188 TDO2P48775 406 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 KCNQ4P56696 695 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 IFT172Q9UG01 1749 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 PTPRUQ92729 1446 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 MROH1Q8NDA8 1641 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 FYB1O15117 783 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 BCAR3O75815 825 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 DIP2AQ14689 1571 aa7.15□□□□□ -1.26
CNOT1-211ENST00000567188 ST18O60284 1047 aa7.15□□□□□ -1.27
CNOT1-211ENST00000567188 RRP12Q5JTH9 1297 aaKnown RBP7.15□□□□□ -1.27
CNOT1-211ENST00000567188 CCDC91Q7Z6B0 441 aa7.15□□□□□ -1.27
CNOT1-211ENST00000567188 TCEAL9Q9UHQ7 104 aa7.15□□□□□ -1.27
CNOT1-211ENST00000567188 NPHP3Q7Z494 1330 aa7.15□□□□□ -1.27
CNOT1-211ENST00000567188 GOLGA6L7A0A1B0GV03 622 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 EIF4A2Q14240 407 aaKnown RBP7.14□□□□□ -1.27
CNOT1-211ENST00000567188 UTP14CQ5TAP6 766 aaKnown RBP7.14□□□□□ -1.27
CNOT1-211ENST00000567188 CERKQ8TCT0 537 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 POLR3GO15318 223 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-211ENST00000567188 RABEP1Q15276 862 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 PSMD1Q99460 953 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 EXOC5O00471 708 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 CIZ1Q9ULV3 898 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-211ENST00000567188 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 KIAA0754O94854 1291 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 FKBP5Q13451 457 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-211ENST00000567188 EXOC6Q8TAG9 804 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 TTLL5Q6EMB2 1281 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 KIF20BQ96Q89 1820 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 KDM4AO75164 1064 aa7.14□□□□□ -1.27
CNOT1-211ENST00000567188 SETD1BQ9UPS6 1966 aaKnown RBP7.13□□□□□ -1.27
CNOT1-211ENST00000567188 ERLIN1O75477 346 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 KIAA1328Q86T90 577 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 TRAK2O60296 914 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 SIL1Q9H173 461 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■■■ 69.2
CNOT1-211ENST00000567188 ATP6V1AP38606 617 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 QTRT2Q9H974 415 aaKnown RBP7.13□□□□□ -1.27
CNOT1-211ENST00000567188 ANKRD36BQ8N2N9 1353 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 WWC1Q8IX03 1113 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 POLR1AO95602 1720 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-211ENST00000567188 HMGB1P1B2RPK0 211 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-211ENST00000567188 FRAT2O75474 233 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-211ENST00000567188 HS1BP3Q53T59 392 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 GORABQ5T7V8 394 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 MSL1Q68DK7 614 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 FAM184AQ8NB25 1140 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 TBX22Q9Y458 520 aa7.13□□□□□ -1.27
CNOT1-211ENST00000567188 PTPRTO14522 1441 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 ADGRL3Q9HAR2 1447 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 TMCO5BA8MYB1 307 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 TRIM6-TRIM34B2RNG4 842 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 ANXA1P04083 346 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 ZCRB1Q8TBF4 217 aaKnown RBP7.12□□□□□ -1.27
CNOT1-211ENST00000567188 MYD88Q99836 296 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 MYOM2P54296 1465 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
CNOT1-211ENST00000567188 NOL8Q76FK4 1167 aaKnown RBP7.12□□□□□ -1.27
CNOT1-211ENST00000567188 C9orf78Q9NZ63 289 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-211ENST00000567188 GCP02774 474 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 FEZ1Q99689 392 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 IVLP07476 585 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 BRINP3Q76B58 766 aa7.12□□□□□ -1.27
CNOT1-211ENST00000567188 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 PPM1FP49593 454 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms