RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SMIM5Q71RC9 77 aa19.85■□□□□ 0.77
FANCA-220ENST00000566409 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
FANCA-220ENST00000566409 VIRMAQ69YN4 1812 aaKnown RBP19.84■□□□□ 0.77
FANCA-220ENST00000566409 MSH5O43196 834 aa19.83■□□□□ 0.77
FANCA-220ENST00000566409 GOLGB1Q14789 3259 aaKnown RBP19.82■□□□□ 0.76
FANCA-220ENST00000566409 ZNF831Q5JPB2 1677 aa19.82■□□□□ 0.76
FANCA-220ENST00000566409 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
FANCA-220ENST00000566409 C1orf141Q5JVX7 400 aa19.82■□□□□ 0.76
FANCA-220ENST00000566409 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
FANCA-220ENST00000566409 CABP4P57796 275 aa19.81■□□□□ 0.76
FANCA-220ENST00000566409 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
FANCA-220ENST00000566409 AK7Q96M32 723 aa19.81■□□□□ 0.76
FANCA-220ENST00000566409 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
FANCA-220ENST00000566409 POLD1P28340 1107 aa19.8■□□□□ 0.76
FANCA-220ENST00000566409 MSL1Q68DK7 614 aa19.8■□□□□ 0.76
FANCA-220ENST00000566409 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
FANCA-220ENST00000566409 COL5A3P25940 1745 aaPredicted RBP19.79■□□□□ 0.76
FANCA-220ENST00000566409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.79■□□□□ 0.76
FANCA-220ENST00000566409 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
FANCA-220ENST00000566409 AKAP4Q5JQC9 854 aa19.79■□□□□ 0.76
FANCA-220ENST00000566409 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
FANCA-220ENST00000566409 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
FANCA-220ENST00000566409 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
FANCA-220ENST00000566409 ADAMTS7Q9UKP4 1686 aa19.78■□□□□ 0.76
FANCA-220ENST00000566409 PHF14O94880 888 aa19.77■□□□□ 0.76
FANCA-220ENST00000566409 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
FANCA-220ENST00000566409 PPP2R1AP30153 589 aa19.76■□□□□ 0.75
FANCA-220ENST00000566409 GNPATO15228 680 aa19.75■□□□□ 0.75
FANCA-220ENST00000566409 SSFA2P28290 1259 aa19.75■□□□□ 0.75
FANCA-220ENST00000566409 MRC1P22897 1456 aa19.74■□□□□ 0.75
FANCA-220ENST00000566409 DCAF8L1A6NGE4 600 aa19.74■□□□□ 0.75
FANCA-220ENST00000566409 RNMTO43148 476 aaKnown RBP19.74■□□□□ 0.75
FANCA-220ENST00000566409 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
FANCA-220ENST00000566409 KLHL34Q8N239 644 aa19.74■□□□□ 0.75
FANCA-220ENST00000566409 NLGN2Q8NFZ4 835 aa19.74■□□□□ 0.75
FANCA-220ENST00000566409 SLC52A2Q9HAB3 445 aa19.74■□□□□ 0.75
FANCA-220ENST00000566409 TJP1Q07157 1748 aa19.73■□□□□ 0.75
FANCA-220ENST00000566409 RC3H1Q5TC82 1133 aaKnown RBP19.72■□□□□ 0.75
FANCA-220ENST00000566409 CICQ96RK0 1608 aaPredicted RBP19.72■□□□□ 0.75
FANCA-220ENST00000566409 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
FANCA-220ENST00000566409 CNTNAP4Q9C0A0 1308 aa19.71■□□□□ 0.75
FANCA-220ENST00000566409 YY1P25490 414 aa19.7■□□□□ 0.74
FANCA-220ENST00000566409 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
FANCA-220ENST00000566409 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
FANCA-220ENST00000566409 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
FANCA-220ENST00000566409 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
FANCA-220ENST00000566409 CHD4Q14839 1912 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 SIPA1L3O60292 1781 aaPredicted RBP19.68■□□□□ 0.74
FANCA-220ENST00000566409 KCPQ6ZWJ8 1503 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 RPS6KA4O75676 772 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 TRAPPC3LQ5T215 181 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 IL17REQ8NFR9 667 aa19.68■□□□□ 0.74
FANCA-220ENST00000566409 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
FANCA-220ENST00000566409 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
FANCA-220ENST00000566409 UBR2Q8IWV8 1755 aa19.67■□□□□ 0.74
FANCA-220ENST00000566409 CRKLP46109 303 aaKnown RBP19.66■□□□□ 0.74
FANCA-220ENST00000566409 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
FANCA-220ENST00000566409 GAS2L2Q8NHY3 880 aa19.66■□□□□ 0.74
FANCA-220ENST00000566409 GNAT3A8MTJ3 354 aa19.65■□□□□ 0.74
FANCA-220ENST00000566409 INTS5Q6P9B9 1019 aaKnown RBP19.65■□□□□ 0.74
FANCA-220ENST00000566409 CD2APQ9Y5K6 639 aa19.65■□□□□ 0.74
FANCA-220ENST00000566409 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
FANCA-220ENST00000566409 ADRA2BP18089 450 aa19.64■□□□□ 0.73
FANCA-220ENST00000566409 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
FANCA-220ENST00000566409 GPR162Q16538 588 aa19.64■□□□□ 0.73
FANCA-220ENST00000566409 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
FANCA-220ENST00000566409 YBX3P16989 372 aaKnown RBP eCLIP19.63■□□□□ 0.73
FANCA-220ENST00000566409 CEMIPQ8WUJ3 1361 aa19.62■□□□□ 0.73
FANCA-220ENST00000566409 MMP10P09238 476 aa19.62■□□□□ 0.73
FANCA-220ENST00000566409 GYS1P13807 737 aa19.62■□□□□ 0.73
FANCA-220ENST00000566409 FCHSD2O94868 740 aa19.61■□□□□ 0.73
FANCA-220ENST00000566409 CYP19A1P11511 503 aaPredicted RBP19.61■□□□□ 0.73
FANCA-220ENST00000566409 RFC4P35249 363 aa19.61■□□□□ 0.73
FANCA-220ENST00000566409 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
FANCA-220ENST00000566409 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
FANCA-220ENST00000566409 NLGN1Q8N2Q7 840 aa19.6■□□□□ 0.73
FANCA-220ENST00000566409 SRP68Q9UHB9 627 aaKnown RBP19.6■□□□□ 0.73
FANCA-220ENST00000566409 TEFQ10587 303 aa19.59■□□□□ 0.73
FANCA-220ENST00000566409 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
FANCA-220ENST00000566409 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
FANCA-220ENST00000566409 DDX10Q13206 875 aaKnown RBP19.58■□□□□ 0.72
FANCA-220ENST00000566409 ZNF790Q6PG37 636 aa19.58■□□□□ 0.72
FANCA-220ENST00000566409 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
FANCA-220ENST00000566409 KIAA1551Q9HCM1 1747 aa19.58■□□□□ 0.72
FANCA-220ENST00000566409 SOS1Q07889 1333 aaPredicted RBP19.57■□□□□ 0.72
FANCA-220ENST00000566409 USP42Q9H9J4 1324 aaKnown RBP19.57■□□□□ 0.72
FANCA-220ENST00000566409 KCNQ3O43525 872 aa19.57■□□□□ 0.72
FANCA-220ENST00000566409 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
FANCA-220ENST00000566409 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
FANCA-220ENST00000566409 FKBP8Q14318 412 aa19.56■□□□□ 0.72
FANCA-220ENST00000566409 MCM10Q7L590 875 aa19.55■□□□□ 0.72
FANCA-220ENST00000566409 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
FANCA-220ENST00000566409 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
FANCA-220ENST00000566409 N4BP2Q86UW6 1770 aaPredicted RBP19.55■□□□□ 0.72
FANCA-220ENST00000566409 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
FANCA-220ENST00000566409 PLEKHF1Q96S99 279 aa19.54■□□□□ 0.72
FANCA-220ENST00000566409 C10orf71Q711Q0 1435 aa19.53■□□□□ 0.72
FANCA-220ENST00000566409 DDR1Q08345 913 aa19.53■□□□□ 0.72
FANCA-220ENST00000566409 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms