RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
EDC3-210ENST00000566219 ATP6V1AP38606 617 aa21.93■■□□□ 1.1
EDC3-210ENST00000566219 APLP1P51693 650 aa21.93■■□□□ 1.1
EDC3-210ENST00000566219 C10orf71Q711Q0 1435 aa21.93■■□□□ 1.1
EDC3-210ENST00000566219 BCS1LQ9Y276 419 aa21.93■■□□□ 1.1
EDC3-210ENST00000566219 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
EDC3-210ENST00000566219 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
EDC3-210ENST00000566219 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
EDC3-210ENST00000566219 WDR90Q96KV7 1748 aa21.92■■□□□ 1.1
EDC3-210ENST00000566219 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
EDC3-210ENST00000566219 KDRP35968 1356 aa21.9■■□□□ 1.1
EDC3-210ENST00000566219 A0A0G2JLW4 131 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 TOMM70O94826 608 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 PHKG2P15735 406 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 EYA1Q99502 592 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 CARD14Q9BXL6 1004 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 NMRK2Q9NPI5 230 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 ATG3Q9NT62 314 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 ZNF831Q5JPB2 1677 aa21.88■■□□□ 1.09
EDC3-210ENST00000566219 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
EDC3-210ENST00000566219 ARFGEF1Q9Y6D6 1849 aa21.86■■□□□ 1.09
EDC3-210ENST00000566219 TGFB2P61812 414 aa21.86■■□□□ 1.09
EDC3-210ENST00000566219 ARHGAP27Q6ZUM4 889 aa21.86■■□□□ 1.09
EDC3-210ENST00000566219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■□□□ 14.4
EDC3-210ENST00000566219 RTCBQ9Y3I0 505 aaKnown RBP21.86■■□□□ 1.09
EDC3-210ENST00000566219 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 FCHSD2O94868 740 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 DPEP1P16444 411 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 TRAPPC3LQ5T215 181 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 DNAJC5GQ8N7S2 189 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
EDC3-210ENST00000566219 NLGN1Q8N2Q7 840 aa21.83■■□□□ 1.09
EDC3-210ENST00000566219 SLC4A9Q96Q91 983 aa21.83■■□□□ 1.09
EDC3-210ENST00000566219 MYH14Q7Z406 1995 aaKnown RBP21.82■■□□□ 1.08
EDC3-210ENST00000566219 RBM42Q9BTD8 480 aaKnown RBP21.82■■□□□ 1.08
EDC3-210ENST00000566219 GYS1P13807 737 aa21.81■■□□□ 1.08
EDC3-210ENST00000566219 ARHGEF1Q92888 912 aaKnown RBP21.81■■□□□ 1.08
EDC3-210ENST00000566219 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
EDC3-210ENST00000566219 C9orf131Q5VYM1 1079 aa21.8■■□□□ 1.08
EDC3-210ENST00000566219 PARP3Q9Y6F1 533 aa21.8■■□□□ 1.08
EDC3-210ENST00000566219 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
EDC3-210ENST00000566219 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
EDC3-210ENST00000566219 ADRA2BP18089 450 aa21.79■■□□□ 1.08
EDC3-210ENST00000566219 HTRA3P83110 453 aa21.79■■□□□ 1.08
EDC3-210ENST00000566219 RFC4P35249 363 aa21.78■■□□□ 1.08
EDC3-210ENST00000566219 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
EDC3-210ENST00000566219 C16orf71Q8IYS4 520 aaPredicted RBP21.78■■□□□ 1.08
EDC3-210ENST00000566219 RBM46Q8TBY0 533 aaKnown RBP21.78■■□□□ 1.08
EDC3-210ENST00000566219 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
EDC3-210ENST00000566219 KDM6AO15550 1401 aaPredicted RBP21.78■■□□□ 1.08
EDC3-210ENST00000566219 TNRC6CQ9HCJ0 1690 aaKnown RBP21.78■■□□□ 1.08
EDC3-210ENST00000566219 RC3H1Q5TC82 1133 aaKnown RBP21.77■■□□□ 1.08
EDC3-210ENST00000566219 RPS6KA4O75676 772 aa21.76■■□□□ 1.07
EDC3-210ENST00000566219 TJP1Q07157 1748 aa21.76■■□□□ 1.07
EDC3-210ENST00000566219 ERVV-2B6SEH9 535 aa21.75■■□□□ 1.07
EDC3-210ENST00000566219 KCNA3P22001 575 aa21.75■■□□□ 1.07
EDC3-210ENST00000566219 TNNT2P45379 298 aaPredicted RBP21.75■■□□□ 1.07
EDC3-210ENST00000566219 KLRG1Q96E93 195 aa21.74■■□□□ 1.07
EDC3-210ENST00000566219 SBF1O95248 1867 aa21.73■■□□□ 1.07
EDC3-210ENST00000566219 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
EDC3-210ENST00000566219 RNF181Q9P0P0 153 aa21.73■■□□□ 1.07
EDC3-210ENST00000566219 PIM2Q9P1W9 311 aa21.73■■□□□ 1.07
EDC3-210ENST00000566219 SRP68Q9UHB9 627 aaKnown RBP21.73■■□□□ 1.07
EDC3-210ENST00000566219 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
EDC3-210ENST00000566219 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
EDC3-210ENST00000566219 KDM2BQ8NHM5 1336 aa21.72■■□□□ 1.07
EDC3-210ENST00000566219 DDR1Q08345 913 aa21.71■■□□□ 1.07
EDC3-210ENST00000566219 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
EDC3-210ENST00000566219 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
EDC3-210ENST00000566219 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
EDC3-210ENST00000566219 CRKLP46109 303 aaKnown RBP21.7■■□□□ 1.06
EDC3-210ENST00000566219 CABP4P57796 275 aa21.7■■□□□ 1.06
EDC3-210ENST00000566219 FSTL1Q12841 308 aa21.7■■□□□ 1.06
EDC3-210ENST00000566219 FKBP8Q14318 412 aa21.7■■□□□ 1.06
EDC3-210ENST00000566219 COL13A1Q5TAT6 717 aaPredicted RBP21.7■■□□□ 1.06
EDC3-210ENST00000566219 USP42Q9H9J4 1324 aaKnown RBP21.7■■□□□ 1.06
EDC3-210ENST00000566219 CHRNA5P30532 468 aa21.69■■□□□ 1.06
EDC3-210ENST00000566219 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
EDC3-210ENST00000566219 JMYQ8N9B5 988 aa21.69■■□□□ 1.06
EDC3-210ENST00000566219 RRAGCQ9HB90 399 aa21.68■■□□□ 1.06
EDC3-210ENST00000566219 CAPN15O75808 1086 aa21.67■■□□□ 1.06
EDC3-210ENST00000566219 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
EDC3-210ENST00000566219 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
EDC3-210ENST00000566219 TIAM2Q8IVF5 1701 aa21.66■■□□□ 1.06
EDC3-210ENST00000566219 AFDNP55196 1824 aaKnown RBP21.65■■□□□ 1.06
EDC3-210ENST00000566219 PCNTO95613 3336 aa21.65■■□□□ 1.06
EDC3-210ENST00000566219 RASSF7Q02833 373 aa21.65■■□□□ 1.06
EDC3-210ENST00000566219 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.06
EDC3-210ENST00000566219 MTHFSP49914 203 aa21.64■■□□□ 1.05
EDC3-210ENST00000566219 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
EDC3-210ENST00000566219 C1orf141Q5JVX7 400 aa21.64■■□□□ 1.05
EDC3-210ENST00000566219 AEBP1Q8IUX7 1158 aa21.64■■□□□ 1.05
EDC3-210ENST00000566219 POLRMTO00411 1230 aaKnown RBP21.63■■□□□ 1.05
EDC3-210ENST00000566219 SMC1BQ8NDV3 1235 aa21.63■■□□□ 1.05
EDC3-210ENST00000566219 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
EDC3-210ENST00000566219 TNS4Q8IZW8 715 aa21.61■■□□□ 1.05
EDC3-210ENST00000566219 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
EDC3-210ENST00000566219 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
EDC3-210ENST00000566219 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms