RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
AC138869.3-201ENST00000563960 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
AC138869.3-201ENST00000563960 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
AC138869.3-201ENST00000563960 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 ANKRD7Q92527 254 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 FEZ1Q99689 392 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
AC138869.3-201ENST00000563960 CAPN2P17655 700 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 GABPB1Q06547 395 aaPredicted RBP11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 PIBF1Q8WXW3 757 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 TOM1O60784 492 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 OGFRQ9NZT2 677 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 EMILIN1Q9Y6C2 1016 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 TTC21AQ8NDW8 1320 aa11.18□□□□□ -0.62
AC138869.3-201ENST00000563960 TULP2O00295 520 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 PTMAP06454 111 aaKnown RBP11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 KIF2CQ99661 725 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 APAF1O14727 1248 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
AC138869.3-201ENST00000563960 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 K7ELQ4 463 aaPredicted RBP11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 NSD2O96028 1365 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 RLBP1P12271 317 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 FKBP5Q13451 457 aaPredicted RBP11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 DHX37Q8IY37 1157 aaKnown RBP11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 C17orf53Q8N3J3 647 aaPredicted RBP11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 GPT2Q8TD30 523 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
AC138869.3-201ENST00000563960 TRIM6-TRIM34B2RNG4 842 aa11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 AKAP12Q02952 1782 aa11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 SYCE3A1L190 88 aa11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 RNF214Q8ND24 703 aa11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
AC138869.3-201ENST00000563960 MON2Q7Z3U7 1717 aa11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 GCP02774 474 aa11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 ZC3H6P61129 1189 aaKnown RBP11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 MPNDQ8N594 471 aa11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
AC138869.3-201ENST00000563960 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 ZBTB9Q96C00 473 aa11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 SPTLC3Q9NUV7 552 aa11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 CTIFO43310 598 aaKnown RBP11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 TERF2Q15554 542 aa11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
AC138869.3-201ENST00000563960 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 PXDNQ92626 1479 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 OVOS2A0A0J9YW53 1432 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 OVOS2Q6IE36 1432 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 CTNNA3Q9UI47 895 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
AC138869.3-201ENST00000563960 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 CYP2E1P05181 493 aaPredicted RBP11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 AMPHP49418 695 aa11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 LTV1Q96GA3 475 aaPredicted RBP11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 TTC12Q9H892 705 aaPredicted RBP11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 MMP14P50281 582 aa11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
AC138869.3-201ENST00000563960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 PKP1Q13835 747 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 CHRNA2Q15822 529 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 CFAP53Q96M91 514 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 LRRC59Q96AG4 307 aaKnown RBP11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 DIAPH3Q9NSV4 1193 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 CALCOCO1Q9P1Z2 691 aa11.1□□□□□ -0.63
AC138869.3-201ENST00000563960 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 NCBP1Q09161 790 aaKnown RBP11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 MORC2Q9Y6X9 1032 aaPredicted RBP11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 U2AF1L5P0DN76 240 aaPredicted RBP11.09□□□□□ -0.63
AC138869.3-201ENST00000563960 NUCB2P80303 420 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms