RNA–Protein interactions for RNA: ENST00000563845.5

KLHDC4-211, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-211ENST00000563845 GNPATO15228 680 aa16.51■□□□□ 0.23
KLHDC4-211ENST00000563845 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
KLHDC4-211ENST00000563845 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
KLHDC4-211ENST00000563845 APLP1P51693 650 aa16.5■□□□□ 0.23
KLHDC4-211ENST00000563845 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
KLHDC4-211ENST00000563845 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
KLHDC4-211ENST00000563845 SMIM5Q71RC9 77 aa16.49■□□□□ 0.23
KLHDC4-211ENST00000563845 C10orf71Q711Q0 1435 aa16.48■□□□□ 0.23
KLHDC4-211ENST00000563845 MMP10P09238 476 aa16.48■□□□□ 0.23
KLHDC4-211ENST00000563845 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
KLHDC4-211ENST00000563845 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
KLHDC4-211ENST00000563845 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
KLHDC4-211ENST00000563845 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
KLHDC4-211ENST00000563845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.23
KLHDC4-211ENST00000563845 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
KLHDC4-211ENST00000563845 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
KLHDC4-211ENST00000563845 TOMM70O94826 608 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 TGFB2P61812 414 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 ITPK1Q13572 414 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 KDRP35968 1356 aa16.45■□□□□ 0.22
KLHDC4-211ENST00000563845 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-211ENST00000563845 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
KLHDC4-211ENST00000563845 RTCBQ9Y3I0 505 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-211ENST00000563845 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-211ENST00000563845 PHKG2P15735 406 aa16.43■□□□□ 0.22
KLHDC4-211ENST00000563845 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
KLHDC4-211ENST00000563845 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
KLHDC4-211ENST00000563845 ADRA2BP18089 450 aa16.42■□□□□ 0.22
KLHDC4-211ENST00000563845 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
KLHDC4-211ENST00000563845 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
KLHDC4-211ENST00000563845 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
KLHDC4-211ENST00000563845 EYA1Q99502 592 aa16.41■□□□□ 0.22
KLHDC4-211ENST00000563845 ATG3Q9NT62 314 aa16.41■□□□□ 0.22
KLHDC4-211ENST00000563845 SBF1O95248 1867 aa16.4■□□□□ 0.22
KLHDC4-211ENST00000563845 A0A0G2JLW4 131 aa16.4■□□□□ 0.22
KLHDC4-211ENST00000563845 FCHSD2O94868 740 aa16.4■□□□□ 0.22
KLHDC4-211ENST00000563845 PARP3Q9Y6F1 533 aa16.4■□□□□ 0.22
KLHDC4-211ENST00000563845 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
KLHDC4-211ENST00000563845 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
KLHDC4-211ENST00000563845 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
KLHDC4-211ENST00000563845 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
KLHDC4-211ENST00000563845 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
KLHDC4-211ENST00000563845 DPEP1P16444 411 aa16.38■□□□□ 0.21
KLHDC4-211ENST00000563845 RFC4P35249 363 aa16.38■□□□□ 0.21
KLHDC4-211ENST00000563845 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
KLHDC4-211ENST00000563845 GYS1P13807 737 aa16.37■□□□□ 0.21
KLHDC4-211ENST00000563845 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
KLHDC4-211ENST00000563845 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
KLHDC4-211ENST00000563845 TJP1Q07157 1748 aa16.36■□□□□ 0.21
KLHDC4-211ENST00000563845 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
KLHDC4-211ENST00000563845 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
KLHDC4-211ENST00000563845 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
KLHDC4-211ENST00000563845 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
KLHDC4-211ENST00000563845 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
KLHDC4-211ENST00000563845 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
KLHDC4-211ENST00000563845 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
KLHDC4-211ENST00000563845 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
KLHDC4-211ENST00000563845 SCN11AQ9UI33 1791 aa16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 FSTL1Q12841 308 aa16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
KLHDC4-211ENST00000563845 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
KLHDC4-211ENST00000563845 KLRG1Q96E93 195 aa16.33■□□□□ 0.2
KLHDC4-211ENST00000563845 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
KLHDC4-211ENST00000563845 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
KLHDC4-211ENST00000563845 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
KLHDC4-211ENST00000563845 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
KLHDC4-211ENST00000563845 CABP4P57796 275 aa16.32■□□□□ 0.2
KLHDC4-211ENST00000563845 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
KLHDC4-211ENST00000563845 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
KLHDC4-211ENST00000563845 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
KLHDC4-211ENST00000563845 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
KLHDC4-211ENST00000563845 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
KLHDC4-211ENST00000563845 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
KLHDC4-211ENST00000563845 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
KLHDC4-211ENST00000563845 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
KLHDC4-211ENST00000563845 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
KLHDC4-211ENST00000563845 PANK3Q9H999 370 aa16.3■□□□□ 0.2
KLHDC4-211ENST00000563845 KCNA3P22001 575 aa16.29■□□□□ 0.2
KLHDC4-211ENST00000563845 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
KLHDC4-211ENST00000563845 C1orf141Q5JVX7 400 aa16.29■□□□□ 0.2
KLHDC4-211ENST00000563845 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
KLHDC4-211ENST00000563845 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-211ENST00000563845 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-211ENST00000563845 HTRA3P83110 453 aa16.28■□□□□ 0.2
KLHDC4-211ENST00000563845 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-211ENST00000563845 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
KLHDC4-211ENST00000563845 MTHFSP49914 203 aa16.27■□□□□ 0.2
KLHDC4-211ENST00000563845 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
KLHDC4-211ENST00000563845 PCNTO95613 3336 aa16.27■□□□□ 0.19
KLHDC4-211ENST00000563845 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
KLHDC4-211ENST00000563845 DDR1Q08345 913 aa16.26■□□□□ 0.19
KLHDC4-211ENST00000563845 FKBP8Q14318 412 aa16.26■□□□□ 0.19
KLHDC4-211ENST00000563845 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
KLHDC4-211ENST00000563845 CHRNA5P30532 468 aa16.25■□□□□ 0.19
KLHDC4-211ENST00000563845 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms