RNA–Protein interactions for RNA: ENST00000563837.1

AC009041.2-208, humanhuman

TSL 2

Gene AC009041.2, Length 705 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-208ENST00000563837 AMIGO3Q86WK7 504 aa25.78■■□□□ 1.72
AC009041.2-208ENST00000563837 KDRP35968 1356 aa25.78■■□□□ 1.72
AC009041.2-208ENST00000563837 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
AC009041.2-208ENST00000563837 RBM42Q9BTD8 480 aaKnown RBP25.77■■□□□ 1.72
AC009041.2-208ENST00000563837 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
AC009041.2-208ENST00000563837 TAF1LQ8IZX4 1826 aa25.75■■□□□ 1.71
AC009041.2-208ENST00000563837 NPC1L1Q9UHC9 1359 aa25.74■■□□□ 1.71
AC009041.2-208ENST00000563837 HMGB2P26583 209 aaKnown RBP25.74■■□□□ 1.71
AC009041.2-208ENST00000563837 YY1P25490 414 aa25.73■■□□□ 1.71
AC009041.2-208ENST00000563837 FLAD1Q8NFF5 587 aa25.73■■□□□ 1.71
AC009041.2-208ENST00000563837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.72■■□□□ 1.71
AC009041.2-208ENST00000563837 U2SURPO15042 1029 aaKnown RBP25.71■■□□□ 1.71
AC009041.2-208ENST00000563837 GNPATO15228 680 aa25.71■■□□□ 1.71
AC009041.2-208ENST00000563837 NFATC2IPQ8NCF5 419 aa25.71■■□□□ 1.71
AC009041.2-208ENST00000563837 SLC4A9Q96Q91 983 aa25.71■■□□□ 1.71
AC009041.2-208ENST00000563837 PTCD1O75127 700 aaKnown RBP25.69■■□□□ 1.7
AC009041.2-208ENST00000563837 AKAP4Q5JQC9 854 aa25.69■■□□□ 1.7
AC009041.2-208ENST00000563837 MAP3K5Q99683 1374 aa25.69■■□□□ 1.7
AC009041.2-208ENST00000563837 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
AC009041.2-208ENST00000563837 NLGN2Q8NFZ4 835 aa25.68■■□□□ 1.7
AC009041.2-208ENST00000563837 COL3A1P02461 1466 aaPredicted RBP25.67■■□□□ 1.7
AC009041.2-208ENST00000563837 COL24A1Q17RW2 1714 aa25.67■■□□□ 1.7
AC009041.2-208ENST00000563837 MTHFSDQ2M296 383 aaKnown RBP25.67■■□□□ 1.7
AC009041.2-208ENST00000563837 LGR6Q9HBX8 967 aa25.67■■□□□ 1.7
AC009041.2-208ENST00000563837 SSFA2P28290 1259 aa25.66■■□□□ 1.7
AC009041.2-208ENST00000563837 UTRNP46939 3433 aa25.65■■□□□ 1.7
AC009041.2-208ENST00000563837 UBR3Q6ZT12 1888 aa25.64■■□□□ 1.7
AC009041.2-208ENST00000563837 GPR162Q16538 588 aa25.64■■□□□ 1.7
AC009041.2-208ENST00000563837 RNMTO43148 476 aaKnown RBP25.62■■□□□ 1.69
AC009041.2-208ENST00000563837 CFAP53Q96M91 514 aa25.61■■□□□ 1.69
AC009041.2-208ENST00000563837 SLC52A2Q9HAB3 445 aa25.61■■□□□ 1.69
AC009041.2-208ENST00000563837 RTCBQ9Y3I0 505 aaKnown RBP25.61■■□□□ 1.69
AC009041.2-208ENST00000563837 PPP2R1AP30153 589 aa25.6■■□□□ 1.69
AC009041.2-208ENST00000563837 SLC39A6Q13433 755 aa25.59■■□□□ 1.69
AC009041.2-208ENST00000563837 TRAPPC3LQ5T215 181 aa25.58■■□□□ 1.69
AC009041.2-208ENST00000563837 SCN11AQ9UI33 1791 aa25.58■■□□□ 1.69
AC009041.2-208ENST00000563837 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
AC009041.2-208ENST00000563837 RC3H1Q5TC82 1133 aaKnown RBP25.56■■□□□ 1.68
AC009041.2-208ENST00000563837 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
AC009041.2-208ENST00000563837 CRKLP46109 303 aaKnown RBP25.55■■□□□ 1.68
AC009041.2-208ENST00000563837 RPS6KA4O75676 772 aa25.54■■□□□ 1.68
AC009041.2-208ENST00000563837 PRKAR2BP31323 418 aa25.54■■□□□ 1.68
AC009041.2-208ENST00000563837 ZNF831Q5JPB2 1677 aa25.54■■□□□ 1.68
AC009041.2-208ENST00000563837 COL5A3P25940 1745 aaPredicted RBP25.54■■□□□ 1.68
AC009041.2-208ENST00000563837 RFC4P35249 363 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 DNAJC10Q8IXB1 793 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 WWC3Q9ULE0 1092 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 NUDCQ9Y266 331 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 CD2APQ9Y5K6 639 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 MRC1P22897 1456 aa25.53■■□□□ 1.68
AC009041.2-208ENST00000563837 GOLGB1Q14789 3259 aaKnown RBP25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 MMP10P09238 476 aa25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 U2AF1L5P0DN76 240 aaPredicted RBP25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 U2AF1Q01081 240 aaKnown RBP eCLIP25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 GAS2L2Q8NHY3 880 aa25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 PHACTR3Q96KR7 559 aa25.52■■□□□ 1.68
AC009041.2-208ENST00000563837 GNAT3A8MTJ3 354 aa25.51■■□□□ 1.67
AC009041.2-208ENST00000563837 YBX3P16989 372 aaKnown RBP eCLIP25.51■■□□□ 1.67
AC009041.2-208ENST00000563837 RSPH6AQ9H0K4 717 aa25.51■■□□□ 1.67
AC009041.2-208ENST00000563837 ADRA2BP18089 450 aa25.5■■□□□ 1.67
AC009041.2-208ENST00000563837 TJP1Q07157 1748 aa25.5■■□□□ 1.67
AC009041.2-208ENST00000563837 IL17REQ8NFR9 667 aa25.49■■□□□ 1.67
AC009041.2-208ENST00000563837 SRP68Q9UHB9 627 aaKnown RBP25.49■■□□□ 1.67
AC009041.2-208ENST00000563837 GYS1P13807 737 aa25.48■■□□□ 1.67
AC009041.2-208ENST00000563837 TEFQ10587 303 aa25.48■■□□□ 1.67
AC009041.2-208ENST00000563837 INTS5Q6P9B9 1019 aaKnown RBP25.48■■□□□ 1.67
AC009041.2-208ENST00000563837 NLGN1Q8N2Q7 840 aa25.47■■□□□ 1.67
AC009041.2-208ENST00000563837 ADAMTS7Q9UKP4 1686 aa25.47■■□□□ 1.67
AC009041.2-208ENST00000563837 KCPQ6ZWJ8 1503 aa25.47■■□□□ 1.67
AC009041.2-208ENST00000563837 MYH14Q7Z406 1995 aaKnown RBP25.46■■□□□ 1.67
AC009041.2-208ENST00000563837 TTC5Q8N0Z6 440 aa25.46■■□□□ 1.67
AC009041.2-208ENST00000563837 CCDC87Q9NVE4 849 aa25.46■■□□□ 1.67
AC009041.2-208ENST00000563837 VIRMAQ69YN4 1812 aaKnown RBP25.45■■□□□ 1.66
AC009041.2-208ENST00000563837 CYP19A1P11511 503 aaPredicted RBP25.44■■□□□ 1.66
AC009041.2-208ENST00000563837 ZNF784Q8NCA9 323 aaPredicted RBP25.43■■□□□ 1.66
AC009041.2-208ENST00000563837 CICQ96RK0 1608 aaPredicted RBP25.43■■□□□ 1.66
AC009041.2-208ENST00000563837 GRIN3BO60391 1043 aa25.42■■□□□ 1.66
AC009041.2-208ENST00000563837 C4AP0C0L4 1744 aa25.42■■□□□ 1.66
AC009041.2-208ENST00000563837 USP42Q9H9J4 1324 aaKnown RBP25.41■■□□□ 1.66
AC009041.2-208ENST00000563837 FKBP8Q14318 412 aa25.41■■□□□ 1.66
AC009041.2-208ENST00000563837 ZBTB1Q9Y2K1 713 aa25.41■■□□□ 1.66
AC009041.2-208ENST00000563837 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
AC009041.2-208ENST00000563837 FCHSD2O94868 740 aa25.4■■□□□ 1.66
AC009041.2-208ENST00000563837 ZNF496Q96IT1 587 aaPredicted RBP25.4■■□□□ 1.66
AC009041.2-208ENST00000563837 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
AC009041.2-208ENST00000563837 CANXP27824 592 aaKnown RBP25.39■■□□□ 1.66
AC009041.2-208ENST00000563837 ZNF790Q6PG37 636 aa25.39■■□□□ 1.66
AC009041.2-208ENST00000563837 MCM10Q7L590 875 aa25.39■■□□□ 1.66
AC009041.2-208ENST00000563837 VSIG10Q8N0Z9 540 aa25.39■■□□□ 1.66
AC009041.2-208ENST00000563837 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
AC009041.2-208ENST00000563837 USPL1Q5W0Q7 1092 aa25.38■■□□□ 1.65
AC009041.2-208ENST00000563837 RTF1Q92541 710 aaKnown RBP25.38■■□□□ 1.65
AC009041.2-208ENST00000563837 CEMIPQ8WUJ3 1361 aa25.37■■□□□ 1.65
AC009041.2-208ENST00000563837 BTBD11A6QL63 1104 aa25.37■■□□□ 1.65
AC009041.2-208ENST00000563837 KCNQ3O43525 872 aa25.37■■□□□ 1.65
AC009041.2-208ENST00000563837 ZPR1O75312 459 aa25.37■■□□□ 1.65
AC009041.2-208ENST00000563837 DCTN1Q14203 1278 aa25.37■■□□□ 1.65
AC009041.2-208ENST00000563837 CHD4Q14839 1912 aa25.36■■□□□ 1.65
AC009041.2-208ENST00000563837 COL15A1P39059 1388 aa25.35■■□□□ 1.65
AC009041.2-208ENST00000563837 A0A0G2JLW4 131 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms