RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CPS1P31327 1500 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 DLC1Q96QB1 1528 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 NKTRP30414 1462 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 PLEKHH1Q9ULM0 1364 aa7.35□□□□□ -1.23
HERPUD1-207ENST00000563781 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
HERPUD1-207ENST00000563781 TBC1D2Q9BYX2 928 aa7.35□□□□□ -1.23
HERPUD1-207ENST00000563781 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
HERPUD1-207ENST00000563781 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
HERPUD1-207ENST00000563781 LTBP4Q8N2S1 1624 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 USP47Q96K76 1375 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 STRCP1A6NGW2 1772 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 FUT2Q10981 343 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 SIRT1Q96EB6 747 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 KNDC1Q76NI1 1749 aa7.34□□□□□ -1.23
HERPUD1-207ENST00000563781 CHD2O14647 1828 aaKnown RBP7.34□□□□□ -1.24
HERPUD1-207ENST00000563781 LRRC7Q96NW7 1537 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 ATP6V1AP38606 617 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 USP46P62068 366 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 DIXDC1Q155Q3 683 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 WAPLQ7Z5K2 1190 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 PRAM1Q96QH2 718 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 TMEM94Q12767 1356 aa7.33□□□□□ -1.24
HERPUD1-207ENST00000563781 HSPA5P11021 654 aaKnown RBP7.32□□□□□ -1.24
HERPUD1-207ENST00000563781 TESK2Q96S53 571 aa7.32□□□□□ -1.24
HERPUD1-207ENST00000563781 ARHGEF28Q8N1W1 1705 aaKnown RBP7.32□□□□□ -1.24
HERPUD1-207ENST00000563781 CENPJQ9HC77 1338 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 ST20-MTHFSA0A0A6YYL1 179 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 HOXA2O43364 376 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 PUS10Q3MIT2 529 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 MORN1Q5T089 497 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 MYSM1Q5VVJ2 828 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 PCDHB3Q9Y5E6 796 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 NCOA3Q9Y6Q9 1424 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 EIF3AQ14152 1382 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 SBNO2Q9Y2G9 1366 aa7.31□□□□□ -1.24
HERPUD1-207ENST00000563781 ADGRL3Q9HAR2 1447 aa7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 MOXD2PA6NHM9 499 aa7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 NDUFV2P19404 249 aa7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 EIF4G2P78344 907 aaKnown RBP eCLIP7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 SAFB2Q14151 953 aaKnown RBP eCLIP7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 POGKQ9P215 609 aa7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-207ENST00000563781 ADGRB2O60241 1585 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 TULP4Q9NRJ4 1543 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 SPTLC1O15269 473 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 GJA5P36382 358 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 TJAP1Q5JTD0 557 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 BLOC1S3Q6QNY0 202 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 HLA-CQ95604 372 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 GOPCQ9HD26 462 aa7.29□□□□□ -1.24
HERPUD1-207ENST00000563781 COPS2P61201 443 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 RSBN1LQ6PCB5 846 aaPredicted RBP7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 SCUBE3Q8IX30 993 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 MTRQ99707 1265 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 HIRIP3Q9BW71 556 aaPredicted RBP7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 SLC27A5Q9Y2P5 690 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 CDC42BPGQ6DT37 1551 aa7.28□□□□□ -1.24
HERPUD1-207ENST00000563781 DCCP43146 1447 aa7.27□□□□□ -1.24
HERPUD1-207ENST00000563781 NALCNQ8IZF0 1738 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 FDX1P10109 184 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 GUCA2AQ02747 115 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 POLR3EQ9NVU0 708 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 CCDC9Q9Y3X0 531 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 QRICH2Q9H0J4 1663 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 XIRP1Q702N8 1843 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.25
HERPUD1-207ENST00000563781 IQSEC2Q5JU85 1478 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 MSH6P52701 1360 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 WASLO00401 505 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 NR1I2O75469 434 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 C19orf44Q9H6X5 657 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 IL21Q9HBE4 155 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 PLSCR2Q9NRY7 297 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 LIMD1Q9UGP4 676 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 PCDHGC3Q9UN70 934 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 PCDHB15Q9Y5E8 787 aa7.26□□□□□ -1.25
HERPUD1-207ENST00000563781 ATP7BP35670 1465 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 C11orf95C9JLR9 678 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 ZPR1O75312 459 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 ITGBL1O95965 494 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 CLK2P49760 499 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 PROCA1Q8NCQ7 364 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 THAP11Q96EK4 314 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 CDK19Q9BWU1 502 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 SALL2Q9Y467 1007 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 MST1RQ04912 1400 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 ANKARQ7Z5J8 1434 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 EVC2Q86UK5 1308 aa7.25□□□□□ -1.25
HERPUD1-207ENST00000563781 C1orf167Q5SNV9 1468 aa7.24□□□□□ -1.25
HERPUD1-207ENST00000563781 ZBTB7CA1YPR0 619 aa7.24□□□□□ -1.25
HERPUD1-207ENST00000563781 FLIIQ13045 1269 aa7.24□□□□□ -1.25
HERPUD1-207ENST00000563781 BRICD5Q6PL45 260 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms