RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
E4F1-203ENST00000563643 COG3Q96JB2 828 aa25.65■■□□□ 1.7
E4F1-203ENST00000563643 RNF181Q9P0P0 153 aa25.65■■□□□ 1.7
E4F1-203ENST00000563643 MAP2P11137 1827 aaKnown RBP25.63■■□□□ 1.69
E4F1-203ENST00000563643 BRCA1P38398 1863 aaKnown RBP25.63■■□□□ 1.69
E4F1-203ENST00000563643 ITGB4P16144 1822 aa25.63■■□□□ 1.69
E4F1-203ENST00000563643 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
E4F1-203ENST00000563643 CCDC87Q9NVE4 849 aa25.62■■□□□ 1.69
E4F1-203ENST00000563643 ITPK1Q13572 414 aa25.61■■□□□ 1.69
E4F1-203ENST00000563643 NLGN1Q8N2Q7 840 aa25.61■■□□□ 1.69
E4F1-203ENST00000563643 KCNA3P22001 575 aa25.6■■□□□ 1.69
E4F1-203ENST00000563643 TMF1P82094 1093 aa25.6■■□□□ 1.69
E4F1-203ENST00000563643 ARFGEF1Q9Y6D6 1849 aa25.6■■□□□ 1.69
E4F1-203ENST00000563643 DCAF5Q96JK2 942 aa25.59■■□□□ 1.69
E4F1-203ENST00000563643 C4AP0C0L4 1744 aa25.58■■□□□ 1.69
E4F1-203ENST00000563643 ATP6V1AP38606 617 aa25.57■■□□□ 1.68
E4F1-203ENST00000563643 RRS1Q15050 365 aaKnown RBP25.57■■□□□ 1.68
E4F1-203ENST00000563643 PIM2Q9P1W9 311 aa25.57■■□□□ 1.68
E4F1-203ENST00000563643 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
E4F1-203ENST00000563643 TRAPPC3LQ5T215 181 aa25.55■■□□□ 1.68
E4F1-203ENST00000563643 ASAP1Q9ULH1 1129 aa25.54■■□□□ 1.68
E4F1-203ENST00000563643 RTCBQ9Y3I0 505 aaKnown RBP25.54■■□□□ 1.68
E4F1-203ENST00000563643 PARP3Q9Y6F1 533 aa25.54■■□□□ 1.68
E4F1-203ENST00000563643 GYS1P13807 737 aa25.52■■□□□ 1.68
E4F1-203ENST00000563643 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
E4F1-203ENST00000563643 TMOD3Q9NYL9 352 aa25.52■■□□□ 1.68
E4F1-203ENST00000563643 ZC3H4Q9UPT8 1303 aaKnown RBP25.51■■□□□ 1.67
E4F1-203ENST00000563643 VEGFAP15692 232 aaPredicted RBP25.5■■□□□ 1.67
E4F1-203ENST00000563643 ARHGEF1Q92888 912 aaKnown RBP25.5■■□□□ 1.67
E4F1-203ENST00000563643 INSRP06213 1382 aa25.49■■□□□ 1.67
E4F1-203ENST00000563643 PCDH10Q9P2E7 1040 aa25.49■■□□□ 1.67
E4F1-203ENST00000563643 ADRA2BP18089 450 aa25.48■■□□□ 1.67
E4F1-203ENST00000563643 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
E4F1-203ENST00000563643 KDRP35968 1356 aa25.46■■□□□ 1.67
E4F1-203ENST00000563643 RFC4P35249 363 aa25.46■■□□□ 1.67
E4F1-203ENST00000563643 PUS7Q96PZ0 661 aaKnown RBP25.46■■□□□ 1.67
E4F1-203ENST00000563643 SBF1O95248 1867 aa25.46■■□□□ 1.67
E4F1-203ENST00000563643 KDM6AO15550 1401 aaPredicted RBP25.46■■□□□ 1.67
E4F1-203ENST00000563643 GLTPD2A6NH11 291 aa25.45■■□□□ 1.66
E4F1-203ENST00000563643 FOXN1O15353 648 aa25.45■■□□□ 1.66
E4F1-203ENST00000563643 RASSF7Q02833 373 aa25.45■■□□□ 1.66
E4F1-203ENST00000563643 ATG3Q9NT62 314 aa25.45■■□□□ 1.66
E4F1-203ENST00000563643 PRDM10Q9NQV6 1147 aa25.44■■□□□ 1.66
E4F1-203ENST00000563643 SPG7Q9UQ90 795 aa25.44■■□□□ 1.66
E4F1-203ENST00000563643 FLT4P35916 1363 aa25.44■■□□□ 1.66
E4F1-203ENST00000563643 CHRNA5P30532 468 aa25.43■■□□□ 1.66
E4F1-203ENST00000563643 FAM161AQ3B820 660 aa25.43■■□□□ 1.66
E4F1-203ENST00000563643 MKRN1Q9UHC7 482 aaKnown RBP25.43■■□□□ 1.66
E4F1-203ENST00000563643 CARD11Q9BXL7 1154 aa25.42■■□□□ 1.66
E4F1-203ENST00000563643 RC3H1Q5TC82 1133 aaKnown RBP25.41■■□□□ 1.66
E4F1-203ENST00000563643 GGNBP2Q9H3C7 697 aa25.41■■□□□ 1.66
E4F1-203ENST00000563643 CNTNAP4Q9C0A0 1308 aa25.4■■□□□ 1.66
E4F1-203ENST00000563643 SLC4A9Q96Q91 983 aa25.4■■□□□ 1.66
E4F1-203ENST00000563643 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
E4F1-203ENST00000563643 CREBZFQ9NS37 354 aa25.4■■□□□ 1.66
E4F1-203ENST00000563643 NCAPD2Q15021 1401 aa25.39■■□□□ 1.66
E4F1-203ENST00000563643 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
E4F1-203ENST00000563643 LMNB1P20700 586 aa25.39■■□□□ 1.66
E4F1-203ENST00000563643 KIF24Q5T7B8 1368 aa25.39■■□□□ 1.65
E4F1-203ENST00000563643 DDR1Q08345 913 aa25.38■■□□□ 1.65
E4F1-203ENST00000563643 SIN3AQ96ST3 1273 aa25.38■■□□□ 1.65
E4F1-203ENST00000563643 FYB1O15117 783 aa25.37■■□□□ 1.65
E4F1-203ENST00000563643 RBM42Q9BTD8 480 aaKnown RBP25.36■■□□□ 1.65
E4F1-203ENST00000563643 COL5A3P25940 1745 aaPredicted RBP25.36■■□□□ 1.65
E4F1-203ENST00000563643 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
E4F1-203ENST00000563643 POTECB2RU33 542 aa25.35■■□□□ 1.65
E4F1-203ENST00000563643 PHKG2P15735 406 aa25.35■■□□□ 1.65
E4F1-203ENST00000563643 CTCFP49711 727 aaPredicted RBP25.35■■□□□ 1.65
E4F1-203ENST00000563643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.35■■□□□ 1.65
E4F1-203ENST00000563643 FKBP8Q14318 412 aa25.34■■□□□ 1.65
E4F1-203ENST00000563643 AIDAQ96BJ3 306 aa25.34■■□□□ 1.65
E4F1-203ENST00000563643 SRP68Q9UHB9 627 aaKnown RBP25.34■■□□□ 1.65
E4F1-203ENST00000563643 TIAM2Q8IVF5 1701 aa25.34■■□□□ 1.65
E4F1-203ENST00000563643 CNTNAP1P78357 1384 aa25.33■■□□□ 1.65
E4F1-203ENST00000563643 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
E4F1-203ENST00000563643 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
E4F1-203ENST00000563643 USP42Q9H9J4 1324 aaKnown RBP25.32■■□□□ 1.64
E4F1-203ENST00000563643 ABHD8Q96I13 439 aa25.31■■□□□ 1.64
E4F1-203ENST00000563643 TONSLQ96HA7 1378 aa25.31■■□□□ 1.64
E4F1-203ENST00000563643 POLRMTO00411 1230 aaKnown RBP25.29■■□□□ 1.64
E4F1-203ENST00000563643 CHADLQ6NUI6 762 aa25.29■■□□□ 1.64
E4F1-203ENST00000563643 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
E4F1-203ENST00000563643 LBX1P52954 281 aa25.27■■□□□ 1.64
E4F1-203ENST00000563643 DPY19L2Q6NUT2 758 aa25.27■■□□□ 1.64
E4F1-203ENST00000563643 MYH14Q7Z406 1995 aaKnown RBP25.27■■□□□ 1.64
E4F1-203ENST00000563643 NFKBIEO00221 500 aa25.26■■□□□ 1.63
E4F1-203ENST00000563643 TESK2Q96S53 571 aa25.26■■□□□ 1.63
E4F1-203ENST00000563643 POTEIP0CG38 1075 aa25.24■■□□□ 1.63
E4F1-203ENST00000563643 POTEJP0CG39 1038 aa25.24■■□□□ 1.63
E4F1-203ENST00000563643 TM4SF1P30408 202 aa25.24■■□□□ 1.63
E4F1-203ENST00000563643 CRKLP46109 303 aaKnown RBP25.24■■□□□ 1.63
E4F1-203ENST00000563643 MLLT1Q03111 559 aaPredicted RBP25.24■■□□□ 1.63
E4F1-203ENST00000563643 ERVV-2B6SEH9 535 aa25.23■■□□□ 1.63
E4F1-203ENST00000563643 VEGFBP49765 207 aa25.23■■□□□ 1.63
E4F1-203ENST00000563643 EYA1Q99502 592 aa25.23■■□□□ 1.63
E4F1-203ENST00000563643 WBP1LQ9NX94 342 aa25.23■■□□□ 1.63
E4F1-203ENST00000563643 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
E4F1-203ENST00000563643 TTLL6Q8N841 843 aa25.21■■□□□ 1.63
E4F1-203ENST00000563643 KIF20BQ96Q89 1820 aa25.2■■□□□ 1.62
E4F1-203ENST00000563643 PASKQ96RG2 1323 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms