RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
SPG7-207ENST00000563218 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
SPG7-207ENST00000563218 PHKG2P15735 406 aa18.41■□□□□ 0.54
SPG7-207ENST00000563218 SIK1P57059 783 aa18.41■□□□□ 0.54
SPG7-207ENST00000563218 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
SPG7-207ENST00000563218 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
SPG7-207ENST00000563218 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
SPG7-207ENST00000563218 SCN11AQ9UI33 1791 aa18.4■□□□□ 0.54
SPG7-207ENST00000563218 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
SPG7-207ENST00000563218 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
SPG7-207ENST00000563218 ADCY9O60503 1353 aa18.4■□□□□ 0.54
SPG7-207ENST00000563218 KDRP35968 1356 aa18.4■□□□□ 0.54
SPG7-207ENST00000563218 SSFA2P28290 1259 aa18.38■□□□□ 0.53
SPG7-207ENST00000563218 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
SPG7-207ENST00000563218 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
SPG7-207ENST00000563218 GNPATO15228 680 aa18.37■□□□□ 0.53
SPG7-207ENST00000563218 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
SPG7-207ENST00000563218 SLC4A9Q96Q91 983 aa18.37■□□□□ 0.53
SPG7-207ENST00000563218 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
SPG7-207ENST00000563218 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
SPG7-207ENST00000563218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.36■□□□□ 0.53
SPG7-207ENST00000563218 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
SPG7-207ENST00000563218 PXDNLA1KZ92 1463 aa18.35■□□□□ 0.53
SPG7-207ENST00000563218 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
SPG7-207ENST00000563218 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SPG7-207ENST00000563218 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
SPG7-207ENST00000563218 MMP10P09238 476 aa18.31■□□□□ 0.52
SPG7-207ENST00000563218 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
SPG7-207ENST00000563218 C10orf71Q711Q0 1435 aa18.31■□□□□ 0.52
SPG7-207ENST00000563218 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
SPG7-207ENST00000563218 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
SPG7-207ENST00000563218 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
SPG7-207ENST00000563218 PANK3Q9H999 370 aa18.3■□□□□ 0.52
SPG7-207ENST00000563218 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
SPG7-207ENST00000563218 PLEKHG2Q9H7P9 1386 aa18.29■□□□□ 0.52
SPG7-207ENST00000563218 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
SPG7-207ENST00000563218 SBF1O95248 1867 aa18.28■□□□□ 0.52
SPG7-207ENST00000563218 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
SPG7-207ENST00000563218 ARHGEF1Q92888 912 aaKnown RBP18.26■□□□□ 0.51
SPG7-207ENST00000563218 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
SPG7-207ENST00000563218 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPG7-207ENST00000563218 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
SPG7-207ENST00000563218 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SPG7-207ENST00000563218 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
SPG7-207ENST00000563218 CCDC88AQ3V6T2 1871 aa18.24■□□□□ 0.51
SPG7-207ENST00000563218 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
SPG7-207ENST00000563218 GYS1P13807 737 aa18.24■□□□□ 0.51
SPG7-207ENST00000563218 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
SPG7-207ENST00000563218 TRAPPC3LQ5T215 181 aa18.24■□□□□ 0.51
SPG7-207ENST00000563218 DLEC1Q9Y238 1755 aa18.23■□□□□ 0.51
SPG7-207ENST00000563218 CABP4P57796 275 aa18.23■□□□□ 0.51
SPG7-207ENST00000563218 KIF3CO14782 793 aa18.22■□□□□ 0.51
SPG7-207ENST00000563218 PTCD1O75127 700 aaKnown RBP18.22■□□□□ 0.51
SPG7-207ENST00000563218 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
SPG7-207ENST00000563218 HSPA6P17066 643 aa18.22■□□□□ 0.51
SPG7-207ENST00000563218 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
SPG7-207ENST00000563218 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
SPG7-207ENST00000563218 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
SPG7-207ENST00000563218 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
SPG7-207ENST00000563218 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
SPG7-207ENST00000563218 DPEP1P16444 411 aa18.21■□□□□ 0.51
SPG7-207ENST00000563218 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
SPG7-207ENST00000563218 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
SPG7-207ENST00000563218 MRC1P22897 1456 aa18.2■□□□□ 0.5
SPG7-207ENST00000563218 SIPA1L3O60292 1781 aaPredicted RBP18.2■□□□□ 0.5
SPG7-207ENST00000563218 MTHFSP49914 203 aa18.2■□□□□ 0.5
SPG7-207ENST00000563218 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
SPG7-207ENST00000563218 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
SPG7-207ENST00000563218 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 ADRA2BP18089 450 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 IL13P35225 146 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 RFC4P35249 363 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
SPG7-207ENST00000563218 TGFB2P61812 414 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 WDR90Q96KV7 1748 aa18.19■□□□□ 0.5
SPG7-207ENST00000563218 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
SPG7-207ENST00000563218 DDR1Q08345 913 aa18.18■□□□□ 0.5
SPG7-207ENST00000563218 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
SPG7-207ENST00000563218 CCDC87Q9NVE4 849 aa18.18■□□□□ 0.5
SPG7-207ENST00000563218 KCNA3P22001 575 aa18.17■□□□□ 0.5
SPG7-207ENST00000563218 FKBP8Q14318 412 aa18.17■□□□□ 0.5
SPG7-207ENST00000563218 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
SPG7-207ENST00000563218 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
SPG7-207ENST00000563218 TIAM2Q8IVF5 1701 aa18.16■□□□□ 0.5
SPG7-207ENST00000563218 FCHSD2O94868 740 aa18.16■□□□□ 0.5
SPG7-207ENST00000563218 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
SPG7-207ENST00000563218 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
SPG7-207ENST00000563218 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
SPG7-207ENST00000563218 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
SPG7-207ENST00000563218 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
SPG7-207ENST00000563218 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
SPG7-207ENST00000563218 LGR6Q9HBX8 967 aa18.14■□□□□ 0.49
SPG7-207ENST00000563218 SCN7AQ01118 1682 aa18.13■□□□□ 0.49
SPG7-207ENST00000563218 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
SPG7-207ENST00000563218 HMOX1P09601 288 aa18.13■□□□□ 0.49
SPG7-207ENST00000563218 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
SPG7-207ENST00000563218 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
SPG7-207ENST00000563218 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
SPG7-207ENST00000563218 CHRNA5P30532 468 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms