RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
SPG7-206ENST00000562775 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 UNC5CLQ8IV45 518 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 EXOC6Q8TAG9 804 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.48
SPG7-206ENST00000562775 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
SPG7-206ENST00000562775 MRPL50Q8N5N7 158 aaKnown RBP18.01■□□□□ 0.47
SPG7-206ENST00000562775 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
SPG7-206ENST00000562775 SPATA31A5Q5VU36 1347 aa18.01■□□□□ 0.47
SPG7-206ENST00000562775 SPATA31A7Q8IWB4 1347 aa18.01■□□□□ 0.47
SPG7-206ENST00000562775 WNK3Q9BYP7 1800 aa18.01■□□□□ 0.47
SPG7-206ENST00000562775 MRC1P22897 1456 aa18■□□□□ 0.47
SPG7-206ENST00000562775 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
SPG7-206ENST00000562775 MS4A1P11836 297 aa18■□□□□ 0.47
SPG7-206ENST00000562775 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
SPG7-206ENST00000562775 BCL9LQ86UU0 1499 aa18■□□□□ 0.47
SPG7-206ENST00000562775 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
SPG7-206ENST00000562775 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
SPG7-206ENST00000562775 ERVV-2B6SEH9 535 aa17.98■□□□□ 0.47
SPG7-206ENST00000562775 EXOC5O00471 708 aa17.98■□□□□ 0.47
SPG7-206ENST00000562775 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
SPG7-206ENST00000562775 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
SPG7-206ENST00000562775 CCDC9Q9Y3X0 531 aaKnown RBP17.98■□□□□ 0.47
SPG7-206ENST00000562775 KCNQ3O43525 872 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 HOXB7P09629 217 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 CABP4P57796 275 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 VPS72Q15906 364 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
SPG7-206ENST00000562775 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
SPG7-206ENST00000562775 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
SPG7-206ENST00000562775 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
SPG7-206ENST00000562775 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.96■□□□□ 0.47
SPG7-206ENST00000562775 TNS2Q63HR2 1409 aa17.96■□□□□ 0.46
SPG7-206ENST00000562775 TRIM27P14373 513 aa17.96■□□□□ 0.46
SPG7-206ENST00000562775 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.46
SPG7-206ENST00000562775 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.46
SPG7-206ENST00000562775 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
SPG7-206ENST00000562775 CCDC30Q5VVM6 783 aa17.95■□□□□ 0.46
SPG7-206ENST00000562775 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
SPG7-206ENST00000562775 USP21Q9UK80 565 aa17.95■□□□□ 0.46
SPG7-206ENST00000562775 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SPG7-206ENST00000562775 RLBP1P12271 317 aa17.94■□□□□ 0.46
SPG7-206ENST00000562775 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
SPG7-206ENST00000562775 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
SPG7-206ENST00000562775 DDB1Q16531 1140 aa17.93■□□□□ 0.46
SPG7-206ENST00000562775 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
SPG7-206ENST00000562775 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
SPG7-206ENST00000562775 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SPG7-206ENST00000562775 SLC39A6Q13433 755 aa17.92■□□□□ 0.46
SPG7-206ENST00000562775 API5Q9BZZ5 524 aaKnown RBP17.92■□□□□ 0.46
SPG7-206ENST00000562775 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
SPG7-206ENST00000562775 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
SPG7-206ENST00000562775 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
SPG7-206ENST00000562775 CCDC136Q96JN2 1154 aa17.91■□□□□ 0.46
SPG7-206ENST00000562775 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
SPG7-206ENST00000562775 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
SPG7-206ENST00000562775 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
SPG7-206ENST00000562775 PTPRCP08575 1304 aa17.9■□□□□ 0.46
SPG7-206ENST00000562775 AAMPQ13685 434 aa17.9■□□□□ 0.46
SPG7-206ENST00000562775 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
SPG7-206ENST00000562775 AFF2P51816 1311 aa17.89■□□□□ 0.45
SPG7-206ENST00000562775 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
SPG7-206ENST00000562775 FAM98CQ17RN3 349 aaKnown RBP17.88■□□□□ 0.45
SPG7-206ENST00000562775 ZNF496Q96IT1 587 aaPredicted RBP17.88■□□□□ 0.45
SPG7-206ENST00000562775 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
SPG7-206ENST00000562775 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
SPG7-206ENST00000562775 ABCC4O15439 1325 aa17.88■□□□□ 0.45
SPG7-206ENST00000562775 TMEM57Q8N5G2 664 aa17.87■□□□□ 0.45
SPG7-206ENST00000562775 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
SPG7-206ENST00000562775 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
SPG7-206ENST00000562775 PAPPAQ13219 1627 aa17.86■□□□□ 0.45
SPG7-206ENST00000562775 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
SPG7-206ENST00000562775 G2E3Q7L622 706 aa17.86■□□□□ 0.45
SPG7-206ENST00000562775 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
SPG7-206ENST00000562775 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
SPG7-206ENST00000562775 GJD4Q96KN9 370 aaPredicted RBP17.85■□□□□ 0.45
SPG7-206ENST00000562775 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
SPG7-206ENST00000562775 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
SPG7-206ENST00000562775 ITGB4P16144 1822 aa17.85■□□□□ 0.45
SPG7-206ENST00000562775 RGS12O14924 1447 aa17.85■□□□□ 0.45
SPG7-206ENST00000562775 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
SPG7-206ENST00000562775 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
SPG7-206ENST00000562775 FLIIQ13045 1269 aa17.84■□□□□ 0.45
SPG7-206ENST00000562775 PIGBQ92521 554 aa17.84■□□□□ 0.45
SPG7-206ENST00000562775 CHPF2Q9P2E5 772 aa17.84■□□□□ 0.45
SPG7-206ENST00000562775 ATRNO75882 1429 aa17.84■□□□□ 0.45
SPG7-206ENST00000562775 BCL9O00512 1426 aa17.83■□□□□ 0.45
SPG7-206ENST00000562775 GLI3P10071 1580 aa17.83■□□□□ 0.45
SPG7-206ENST00000562775 C5P01031 1676 aa17.83■□□□□ 0.44
SPG7-206ENST00000562775 INTS3Q68E01 1043 aaKnown RBP17.83■□□□□ 0.44
SPG7-206ENST00000562775 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.44
SPG7-206ENST00000562775 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
SPG7-206ENST00000562775 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
SPG7-206ENST00000562775 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
SPG7-206ENST00000562775 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
SPG7-206ENST00000562775 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
SPG7-206ENST00000562775 A0A0G2JS52 829 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms