RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
AC055876.4-201ENST00000562515 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
AC055876.4-201ENST00000562515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC055876.4-201ENST00000562515 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
AC055876.4-201ENST00000562515 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
AC055876.4-201ENST00000562515 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
AC055876.4-201ENST00000562515 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
AC055876.4-201ENST00000562515 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
AC055876.4-201ENST00000562515 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
AC055876.4-201ENST00000562515 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
AC055876.4-201ENST00000562515 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
AC055876.4-201ENST00000562515 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
AC055876.4-201ENST00000562515 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
AC055876.4-201ENST00000562515 ITPK1Q13572 414 aa13.09□□□□□ -0.31
AC055876.4-201ENST00000562515 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
AC055876.4-201ENST00000562515 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
AC055876.4-201ENST00000562515 ADCY9O60503 1353 aa13.08□□□□□ -0.31
AC055876.4-201ENST00000562515 KDRP35968 1356 aa13.08□□□□□ -0.31
AC055876.4-201ENST00000562515 MMP10P09238 476 aa13.08□□□□□ -0.32
AC055876.4-201ENST00000562515 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
AC055876.4-201ENST00000562515 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
AC055876.4-201ENST00000562515 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
AC055876.4-201ENST00000562515 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
AC055876.4-201ENST00000562515 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 TJP1Q07157 1748 aa13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 RFC4P35249 363 aa13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 CABP4P57796 275 aa13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
AC055876.4-201ENST00000562515 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
AC055876.4-201ENST00000562515 ARFGEF1Q9Y6D6 1849 aa13.05□□□□□ -0.32
AC055876.4-201ENST00000562515 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
AC055876.4-201ENST00000562515 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
AC055876.4-201ENST00000562515 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
AC055876.4-201ENST00000562515 MYH14Q7Z406 1995 aaKnown RBP13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 AMOTQ4VCS5 1084 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 PANK3Q9H999 370 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
AC055876.4-201ENST00000562515 HSPA5P11021 654 aaKnown RBP13.03□□□□□ -0.32
AC055876.4-201ENST00000562515 MTHFSP49914 203 aa13.03□□□□□ -0.32
AC055876.4-201ENST00000562515 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
AC055876.4-201ENST00000562515 HSPA6P17066 643 aa13.02□□□□□ -0.33
AC055876.4-201ENST00000562515 TGFB2P61812 414 aa13.02□□□□□ -0.33
AC055876.4-201ENST00000562515 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
AC055876.4-201ENST00000562515 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
AC055876.4-201ENST00000562515 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
AC055876.4-201ENST00000562515 A0A0G2JLW4 131 aa13□□□□□ -0.33
AC055876.4-201ENST00000562515 RPS6KA4O75676 772 aa13□□□□□ -0.33
AC055876.4-201ENST00000562515 FCHSD2O94868 740 aa13□□□□□ -0.33
AC055876.4-201ENST00000562515 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
AC055876.4-201ENST00000562515 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
AC055876.4-201ENST00000562515 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
AC055876.4-201ENST00000562515 GYS1P13807 737 aa12.99□□□□□ -0.33
AC055876.4-201ENST00000562515 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
AC055876.4-201ENST00000562515 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
AC055876.4-201ENST00000562515 DPEP1P16444 411 aa12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
AC055876.4-201ENST00000562515 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
AC055876.4-201ENST00000562515 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
AC055876.4-201ENST00000562515 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
AC055876.4-201ENST00000562515 KIF3CO14782 793 aa12.97□□□□□ -0.33
AC055876.4-201ENST00000562515 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
AC055876.4-201ENST00000562515 ZPR1O75312 459 aa12.96□□□□□ -0.33
AC055876.4-201ENST00000562515 PIM2Q9P1W9 311 aa12.96□□□□□ -0.33
AC055876.4-201ENST00000562515 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
AC055876.4-201ENST00000562515 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
AC055876.4-201ENST00000562515 MRC1P22897 1456 aa12.96□□□□□ -0.34
AC055876.4-201ENST00000562515 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
AC055876.4-201ENST00000562515 TIAM2Q8IVF5 1701 aa12.95□□□□□ -0.34
AC055876.4-201ENST00000562515 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
AC055876.4-201ENST00000562515 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 SBF1O95248 1867 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 TOMM70O94826 608 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 APLP1P51693 650 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 FKBP8Q14318 412 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 COL15A1P39059 1388 aa12.94□□□□□ -0.34
AC055876.4-201ENST00000562515 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 HMOX1P09601 288 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 IL13P35225 146 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
AC055876.4-201ENST00000562515 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 DDR1Q08345 913 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms