RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
TCF4-211ENST00000561992 AOX1Q06278 1338 aa12□□□□□ -0.49
TCF4-211ENST00000561992 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
TCF4-211ENST00000561992 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCF4-211ENST00000561992 CHL1O00533 1208 aa11.99□□□□□ -0.49
TCF4-211ENST00000561992 NEK4P51957 841 aa11.99□□□□□ -0.49
TCF4-211ENST00000561992 PDE1AP54750 535 aa11.99□□□□□ -0.49
TCF4-211ENST00000561992 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
TCF4-211ENST00000561992 HMOX1P09601 288 aa11.98□□□□□ -0.49
TCF4-211ENST00000561992 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
TCF4-211ENST00000561992 THUMPD2Q9BTF0 503 aaKnown RBP11.98□□□□□ -0.49
TCF4-211ENST00000561992 DLG5Q8TDM6 1919 aa11.98□□□□□ -0.49
TCF4-211ENST00000561992 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
TCF4-211ENST00000561992 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
TCF4-211ENST00000561992 SPTLC3Q9NUV7 552 aa11.98□□□□□ -0.49
TCF4-211ENST00000561992 MSH6P52701 1360 aa11.97□□□□□ -0.49
TCF4-211ENST00000561992 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
TCF4-211ENST00000561992 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
TCF4-211ENST00000561992 SALL3Q9BXA9 1300 aa11.97□□□□□ -0.49
TCF4-211ENST00000561992 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.49
TCF4-211ENST00000561992 STAP2Q9UGK3 403 aa11.96□□□□□ -0.49
TCF4-211ENST00000561992 CFAP65Q6ZU64 1925 aaKnown RBP11.96□□□□□ -0.49
TCF4-211ENST00000561992 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.5
TCF4-211ENST00000561992 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.5
TCF4-211ENST00000561992 ATP6V1DQ9Y5K8 247 aa11.96□□□□□ -0.5
TCF4-211ENST00000561992 MON2Q7Z3U7 1717 aa11.95□□□□□ -0.5
TCF4-211ENST00000561992 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
TCF4-211ENST00000561992 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
TCF4-211ENST00000561992 AK9Q5TCS8 1911 aa11.95□□□□□ -0.5
TCF4-211ENST00000561992 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
TCF4-211ENST00000561992 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
TCF4-211ENST00000561992 COG3Q96JB2 828 aa11.95□□□□□ -0.5
TCF4-211ENST00000561992 GTPBP4Q9BZE4 634 aaKnown RBP11.95□□□□□ -0.5
TCF4-211ENST00000561992 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
TCF4-211ENST00000561992 GNAI2P04899 355 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 MX1P20591 662 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
TCF4-211ENST00000561992 DHX37Q8IY37 1157 aaKnown RBP11.94□□□□□ -0.5
TCF4-211ENST00000561992 EMILIN1Q9Y6C2 1016 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 GNAI3P08754 354 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 DMTNQ08495 405 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCF4-211ENST00000561992 MEIS3Q99687 375 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 DIAPH3Q9NSV4 1193 aa11.94□□□□□ -0.5
TCF4-211ENST00000561992 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
TCF4-211ENST00000561992 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
TCF4-211ENST00000561992 CHMLP26374 656 aa11.93□□□□□ -0.5
TCF4-211ENST00000561992 UBE2HP62256 183 aa11.93□□□□□ -0.5
TCF4-211ENST00000561992 DNTTIP2Q5QJE6 756 aaKnown RBP11.93□□□□□ -0.5
TCF4-211ENST00000561992 RNF214Q8ND24 703 aa11.93□□□□□ -0.5
TCF4-211ENST00000561992 USP25Q9UHP3 1055 aa11.93□□□□□ -0.5
TCF4-211ENST00000561992 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
TCF4-211ENST00000561992 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
TCF4-211ENST00000561992 C3P01024 1663 aa11.92□□□□□ -0.5
TCF4-211ENST00000561992 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
TCF4-211ENST00000561992 GOLGA6L6A8MZA4 724 aa11.92□□□□□ -0.5
TCF4-211ENST00000561992 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
TCF4-211ENST00000561992 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
TCF4-211ENST00000561992 SETD1AO15047 1707 aaKnown RBP11.92□□□□□ -0.5
TCF4-211ENST00000561992 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
TCF4-211ENST00000561992 KDM4AO75164 1064 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 HSPA4P34932 840 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 CHAF1AQ13111 956 aaPredicted RBP11.91□□□□□ -0.5
TCF4-211ENST00000561992 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
TCF4-211ENST00000561992 CRB1P82279 1406 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
TCF4-211ENST00000561992 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
TCF4-211ENST00000561992 KIF20AO95235 890 aa11.9□□□□□ -0.5
TCF4-211ENST00000561992 ADCY5O95622 1261 aa11.9□□□□□ -0.5
TCF4-211ENST00000561992 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
TCF4-211ENST00000561992 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
TCF4-211ENST00000561992 SYCP1Q15431 976 aa11.9□□□□□ -0.5
TCF4-211ENST00000561992 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.5
TCF4-211ENST00000561992 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.51
TCF4-211ENST00000561992 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 TECPR2O15040 1411 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 NME9Q86XW9 330 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
TCF4-211ENST00000561992 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
TCF4-211ENST00000561992 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
TCF4-211ENST00000561992 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 FUCA2Q9BTY2 467 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 CPS1P31327 1500 aa11.88□□□□□ -0.51
TCF4-211ENST00000561992 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
TCF4-211ENST00000561992 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
TCF4-211ENST00000561992 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms