RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 LOC105371045A0A1W2PR82 267 aa8□□□□□ -1.13
HERC1-213ENST00000561359 CAMK2BQ13554 666 aa8□□□□□ -1.13
HERC1-213ENST00000561359 DNAJC5GQ8N7S2 189 aa8□□□□□ -1.13
HERC1-213ENST00000561359 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
HERC1-213ENST00000561359 TRPM3Q9HCF6 1732 aaPredicted RBP8□□□□□ -1.13
HERC1-213ENST00000561359 RGPD3A6NKT7 1758 aaPredicted RBP7.99□□□□□ -1.13
HERC1-213ENST00000561359 RGPD4Q7Z3J3 1758 aa7.99□□□□□ -1.13
HERC1-213ENST00000561359 E2F4Q16254 413 aa7.99□□□□□ -1.13
HERC1-213ENST00000561359 MARCH10Q8NA82 808 aaPredicted RBP7.99□□□□□ -1.13
HERC1-213ENST00000561359 IFT172Q9UG01 1749 aa7.99□□□□□ -1.13
HERC1-213ENST00000561359 PRR36Q9H6K5 1346 aa7.99□□□□□ -1.13
HERC1-213ENST00000561359 ANKRD30BQ9BXX2 1392 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 PPLO60437 1756 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 ATP7BP35670 1465 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 PCNTO95613 3336 aa7.98□□□□□ -1.13
HERC1-213ENST00000561359 EIF3AQ14152 1382 aaKnown RBP7.97□□□□□ -1.13
HERC1-213ENST00000561359 PSEN2P49810 448 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 FOSBP53539 338 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 ZNF827Q17R98 1081 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 POTEEQ6S8J3 1075 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 TOM1L2Q6ZVM7 507 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 SLC16A10Q8TF71 515 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 KNDC1Q76NI1 1749 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
HERC1-213ENST00000561359 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
HERC1-213ENST00000561359 CRB1P82279 1406 aa7.96□□□□□ -1.13
HERC1-213ENST00000561359 PEAK1Q9H792 1746 aa7.96□□□□□ -1.14
HERC1-213ENST00000561359 C14orf93Q9H972 538 aaKnown RBP7.96□□□□□ -1.14
HERC1-213ENST00000561359 CPDO75976 1380 aa7.96□□□□□ -1.14
HERC1-213ENST00000561359 PIK3C2GO75747 1445 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 PARP4Q9UKK3 1724 aaKnown RBP7.95□□□□□ -1.14
HERC1-213ENST00000561359 WASLO00401 505 aaPredicted RBP7.95□□□□□ -1.14
HERC1-213ENST00000561359 PLCB2Q00722 1185 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 CFAP70Q5T0N1 1121 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 CDCA7Q9BWT1 371 aaPredicted RBP7.95□□□□□ -1.14
HERC1-213ENST00000561359 WWC3Q9ULE0 1092 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 ADCY9O60503 1353 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 BCL9O00512 1426 aa7.95□□□□□ -1.14
HERC1-213ENST00000561359 COL5A2P05997 1499 aaPredicted RBP7.94□□□□□ -1.14
HERC1-213ENST00000561359 GCP02774 474 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 PTPREP23469 700 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 DMRTA1Q5VZB9 504 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 KLRG1Q96E93 195 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 ACSBG1Q96GR2 724 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 BCL2L12Q9HB09 334 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 TFCP2L1Q9NZI6 479 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 SBF2Q86WG5 1849 aa7.94□□□□□ -1.14
HERC1-213ENST00000561359 EXOC5O00471 708 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 TOMM70O94826 608 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 HTRA3P83110 453 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
HERC1-213ENST00000561359 STAC3Q96MF2 364 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 TRAK1Q9UPV9 953 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
HERC1-213ENST00000561359 PHRF1Q9P1Y6 1649 aaKnown RBP7.92□□□□□ -1.14
HERC1-213ENST00000561359 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 ADGRD1Q6QNK2 874 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 NLRP13Q86W25 1043 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 DDX12PQ92771 950 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
HERC1-213ENST00000561359 ADAM33Q9BZ11 813 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 LRRC4BQ9NT99 713 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
HERC1-213ENST00000561359 SPDYE16A6NNV3 312 aaPredicted RBP7.91□□□□□ -1.14
HERC1-213ENST00000561359 PHF14O94880 888 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 FBXW7Q969H0 707 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 USP19O94966 1318 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 PNPLA7Q6ZV29 1317 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 BRD4O60885 1362 aaPredicted RBP7.91□□□□□ -1.14
HERC1-213ENST00000561359 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 LMO7Q8WWI1 1683 aa7.91□□□□□ -1.14
HERC1-213ENST00000561359 ACEP12821 1306 aa7.9□□□□□ -1.14
HERC1-213ENST00000561359 TK2O00142 265 aa7.9□□□□□ -1.14
HERC1-213ENST00000561359 TOPAZ1Q8N9V7 1692 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 USP6P35125 1406 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 PDIA6Q15084 440 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 MSL1Q68DK7 614 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 EPAS1Q99814 870 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 CD2APQ9Y5K6 639 aa7.89□□□□□ -1.15
HERC1-213ENST00000561359 KCNQ4P56696 695 aa7.88□□□□□ -1.15
HERC1-213ENST00000561359 NBR1Q14596 966 aa7.88□□□□□ -1.15
HERC1-213ENST00000561359 SLC27A3Q5K4L6 730 aa7.88□□□□□ -1.15
HERC1-213ENST00000561359 C16orf71Q8IYS4 520 aaPredicted RBP7.88□□□□□ -1.15
HERC1-213ENST00000561359 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
HERC1-213ENST00000561359 PAPPAQ13219 1627 aa7.88□□□□□ -1.15
HERC1-213ENST00000561359 GRXCR2A6NFK2 248 aa7.87□□□□□ -1.15
HERC1-213ENST00000561359 HSPA1AP0DMV8 641 aaKnown RBP7.87□□□□□ -1.15
HERC1-213ENST00000561359 HSPA1BP0DMV9 641 aaKnown RBP7.87□□□□□ -1.15
HERC1-213ENST00000561359 RBM46Q8TBY0 533 aaKnown RBP7.87□□□□□ -1.15
HERC1-213ENST00000561359 NMRK2Q9NPI5 230 aa7.87□□□□□ -1.15
HERC1-213ENST00000561359 POLR3AO14802 1390 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms