RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CYP27B1O15528 508 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
SPG11-224ENST00000561268 PTGER2P43116 358 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 AMER1Q5JTC6 1135 aaPredicted RBP9.48□□□□□ -0.89
SPG11-224ENST00000561268 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 ACSBG1Q96GR2 724 aa9.48□□□□□ -0.89
SPG11-224ENST00000561268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPG11-224ENST00000561268 DLG5Q8TDM6 1919 aa9.47□□□□□ -0.89
SPG11-224ENST00000561268 NKX1-1Q15270 411 aaPredicted RBP9.47□□□□□ -0.89
SPG11-224ENST00000561268 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
SPG11-224ENST00000561268 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
SPG11-224ENST00000561268 PDGFDQ9GZP0 370 aaPredicted RBP9.47□□□□□ -0.89
SPG11-224ENST00000561268 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
SPG11-224ENST00000561268 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
SPG11-224ENST00000561268 ZNF316A6NFI3 1004 aaPredicted RBP9.46□□□□□ -0.9
SPG11-224ENST00000561268 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
SPG11-224ENST00000561268 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.9
SPG11-224ENST00000561268 DIEXFQ68CQ4 756 aaKnown RBP9.46□□□□□ -0.9
SPG11-224ENST00000561268 EYA1Q99502 592 aa9.46□□□□□ -0.9
SPG11-224ENST00000561268 PANK3Q9H999 370 aa9.46□□□□□ -0.9
SPG11-224ENST00000561268 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
SPG11-224ENST00000561268 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
SPG11-224ENST00000561268 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
SPG11-224ENST00000561268 STK32BQ9NY57 414 aa9.45□□□□□ -0.9
SPG11-224ENST00000561268 PNPLA7Q6ZV29 1317 aa9.45□□□□□ -0.9
SPG11-224ENST00000561268 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
SPG11-224ENST00000561268 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
SPG11-224ENST00000561268 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
SPG11-224ENST00000561268 DLEC1Q9Y238 1755 aa9.44□□□□□ -0.9
SPG11-224ENST00000561268 SCN7AQ01118 1682 aa9.43□□□□□ -0.9
SPG11-224ENST00000561268 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 LAMB4A4D0S4 1761 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 BCORQ6W2J9 1755 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 PHKG2P15735 406 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
SPG11-224ENST00000561268 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
SPG11-224ENST00000561268 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
SPG11-224ENST00000561268 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
SPG11-224ENST00000561268 ZBTB7AO95365 584 aa9.4□□□□□ -0.9
SPG11-224ENST00000561268 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
SPG11-224ENST00000561268 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
SPG11-224ENST00000561268 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.91
SPG11-224ENST00000561268 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
SPG11-224ENST00000561268 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
SPG11-224ENST00000561268 IL13P35225 146 aa9.39□□□□□ -0.91
SPG11-224ENST00000561268 IFNL2Q8IZJ0 200 aa9.39□□□□□ -0.91
SPG11-224ENST00000561268 PIGBQ92521 554 aa9.39□□□□□ -0.91
SPG11-224ENST00000561268 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
SPG11-224ENST00000561268 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
SPG11-224ENST00000561268 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
SPG11-224ENST00000561268 MORC1Q86VD1 984 aa9.38□□□□□ -0.91
SPG11-224ENST00000561268 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
SPG11-224ENST00000561268 SMARCC1Q92922 1105 aaPredicted RBP9.38□□□□□ -0.91
SPG11-224ENST00000561268 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
SPG11-224ENST00000561268 KCNQ4P56696 695 aa9.37□□□□□ -0.91
SPG11-224ENST00000561268 ARFGEF2Q9Y6D5 1785 aa9.37□□□□□ -0.91
SPG11-224ENST00000561268 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
SPG11-224ENST00000561268 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 SIK1P57059 783 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 AMIGO3Q86WK7 504 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 DCAF5Q96JK2 942 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 SYT17Q9BSW7 474 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
SPG11-224ENST00000561268 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
SPG11-224ENST00000561268 UTRNP46939 3433 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 ANKRD31Q8N7Z5 1873 aa9.36□□□□□ -0.91
SPG11-224ENST00000561268 ITPK1Q13572 414 aa9.35□□□□□ -0.91
SPG11-224ENST00000561268 MPRIPQ6WCQ1 1025 aa9.35□□□□□ -0.91
SPG11-224ENST00000561268 COL23A1Q86Y22 540 aaPredicted RBP9.35□□□□□ -0.91
SPG11-224ENST00000561268 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
SPG11-224ENST00000561268 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 SBF1O95248 1867 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 C10orf71Q711Q0 1435 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 SSFA2P28290 1259 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 MTHFSP49914 203 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 PLEKHO1Q53GL0 409 aaPredicted RBP9.34□□□□□ -0.91
SPG11-224ENST00000561268 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
SPG11-224ENST00000561268 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 SLC4A9Q96Q91 983 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 ARXQ96QS3 562 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 TFCP2L1Q9NZI6 479 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 ASAP1Q9ULH1 1129 aa9.34□□□□□ -0.91
SPG11-224ENST00000561268 SULT6B1Q6IMI4 303 aa9.33□□□□□ -0.92
SPG11-224ENST00000561268 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
SPG11-224ENST00000561268 CEMIPQ8WUJ3 1361 aa9.33□□□□□ -0.92
SPG11-224ENST00000561268 COL11A2P13942 1736 aaPredicted RBP9.33□□□□□ -0.92
SPG11-224ENST00000561268 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
SPG11-224ENST00000561268 GOLGB1Q14789 3259 aaKnown RBP9.32□□□□□ -0.92
SPG11-224ENST00000561268 PLSCR2Q9NRY7 297 aa9.32□□□□□ -0.92
SPG11-224ENST00000561268 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
SPG11-224ENST00000561268 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms