RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 ARHGAP27Q6ZUM4 889 aa16.87■□□□□ 0.29
CRTC3-213ENST00000561255 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
CRTC3-213ENST00000561255 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
CRTC3-213ENST00000561255 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
CRTC3-213ENST00000561255 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
CRTC3-213ENST00000561255 A0A0G2JLW4 131 aa16.86■□□□□ 0.29
CRTC3-213ENST00000561255 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
CRTC3-213ENST00000561255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.29
CRTC3-213ENST00000561255 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
CRTC3-213ENST00000561255 BRCA1P38398 1863 aaKnown RBP16.85■□□□□ 0.29
CRTC3-213ENST00000561255 TMF1P82094 1093 aa16.85■□□□□ 0.29
CRTC3-213ENST00000561255 FSTL1Q12841 308 aa16.85■□□□□ 0.29
CRTC3-213ENST00000561255 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
CRTC3-213ENST00000561255 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
CRTC3-213ENST00000561255 CCDC87Q9NVE4 849 aa16.84■□□□□ 0.29
CRTC3-213ENST00000561255 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
CRTC3-213ENST00000561255 FCHSD2O94868 740 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 DPEP1P16444 411 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 ADRA2BP18089 450 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-213ENST00000561255 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-213ENST00000561255 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
CRTC3-213ENST00000561255 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
CRTC3-213ENST00000561255 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
CRTC3-213ENST00000561255 KDRP35968 1356 aa16.82■□□□□ 0.28
CRTC3-213ENST00000561255 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
CRTC3-213ENST00000561255 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
CRTC3-213ENST00000561255 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
CRTC3-213ENST00000561255 PHKG2P15735 406 aa16.81■□□□□ 0.28
CRTC3-213ENST00000561255 RC3H1Q5TC82 1133 aaKnown RBP16.81■□□□□ 0.28
CRTC3-213ENST00000561255 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
CRTC3-213ENST00000561255 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
CRTC3-213ENST00000561255 GYS1P13807 737 aa16.8■□□□□ 0.28
CRTC3-213ENST00000561255 KCNA3P22001 575 aa16.8■□□□□ 0.28
CRTC3-213ENST00000561255 HTRA3P83110 453 aa16.8■□□□□ 0.28
CRTC3-213ENST00000561255 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
CRTC3-213ENST00000561255 PARP3Q9Y6F1 533 aa16.8■□□□□ 0.28
CRTC3-213ENST00000561255 WASHC2AQ641Q2 1341 aa16.79■□□□□ 0.28
CRTC3-213ENST00000561255 EYA1Q99502 592 aa16.79■□□□□ 0.28
CRTC3-213ENST00000561255 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
CRTC3-213ENST00000561255 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
CRTC3-213ENST00000561255 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
CRTC3-213ENST00000561255 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
CRTC3-213ENST00000561255 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
CRTC3-213ENST00000561255 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
CRTC3-213ENST00000561255 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
CRTC3-213ENST00000561255 RFC4P35249 363 aa16.77■□□□□ 0.28
CRTC3-213ENST00000561255 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
CRTC3-213ENST00000561255 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
CRTC3-213ENST00000561255 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-213ENST00000561255 PRELPP51888 382 aa16.76■□□□□ 0.27
CRTC3-213ENST00000561255 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
CRTC3-213ENST00000561255 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
CRTC3-213ENST00000561255 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
CRTC3-213ENST00000561255 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
CRTC3-213ENST00000561255 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
CRTC3-213ENST00000561255 RRAGCQ9HB90 399 aa16.75■□□□□ 0.27
CRTC3-213ENST00000561255 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
CRTC3-213ENST00000561255 CAPN15O75808 1086 aa16.74■□□□□ 0.27
CRTC3-213ENST00000561255 SMC1BQ8NDV3 1235 aa16.74■□□□□ 0.27
CRTC3-213ENST00000561255 SBF1O95248 1867 aa16.73■□□□□ 0.27
CRTC3-213ENST00000561255 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
CRTC3-213ENST00000561255 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
CRTC3-213ENST00000561255 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
CRTC3-213ENST00000561255 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
CRTC3-213ENST00000561255 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
CRTC3-213ENST00000561255 DDR1Q08345 913 aa16.69■□□□□ 0.26
CRTC3-213ENST00000561255 EIF4A2Q14240 407 aaKnown RBP16.69■□□□□ 0.26
CRTC3-213ENST00000561255 FKBP8Q14318 412 aa16.69■□□□□ 0.26
CRTC3-213ENST00000561255 KDM6AO15550 1401 aaPredicted RBP16.69■□□□□ 0.26
CRTC3-213ENST00000561255 CHRNA5P30532 468 aa16.68■□□□□ 0.26
CRTC3-213ENST00000561255 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
CRTC3-213ENST00000561255 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
CRTC3-213ENST00000561255 CABP4P57796 275 aa16.67■□□□□ 0.26
CRTC3-213ENST00000561255 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
CRTC3-213ENST00000561255 HSPA1AP0DMV8 641 aaKnown RBP16.66■□□□□ 0.26
CRTC3-213ENST00000561255 HSPA1BP0DMV9 641 aaKnown RBP16.66■□□□□ 0.26
CRTC3-213ENST00000561255 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
CRTC3-213ENST00000561255 TM4SF1P30408 202 aa16.66■□□□□ 0.26
CRTC3-213ENST00000561255 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
CRTC3-213ENST00000561255 GLTPD2A6NH11 291 aa16.65■□□□□ 0.26
CRTC3-213ENST00000561255 PTCD1O75127 700 aaKnown RBP16.65■□□□□ 0.26
CRTC3-213ENST00000561255 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
CRTC3-213ENST00000561255 LMNB1P20700 586 aa16.64■□□□□ 0.25
CRTC3-213ENST00000561255 AMOTQ4VCS5 1084 aa16.64■□□□□ 0.25
CRTC3-213ENST00000561255 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
CRTC3-213ENST00000561255 TJP1Q07157 1748 aa16.64■□□□□ 0.25
CRTC3-213ENST00000561255 RASSF7Q02833 373 aa16.63■□□□□ 0.25
CRTC3-213ENST00000561255 MTHFSP49914 203 aa16.62■□□□□ 0.25
CRTC3-213ENST00000561255 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
CRTC3-213ENST00000561255 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
CRTC3-213ENST00000561255 ZPR1O75312 459 aa16.61■□□□□ 0.25
CRTC3-213ENST00000561255 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
CRTC3-213ENST00000561255 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
CRTC3-213ENST00000561255 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
CRTC3-213ENST00000561255 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
CRTC3-213ENST00000561255 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
CRTC3-213ENST00000561255 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms