RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LOC102724428A0A0B4J2F2 783 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 PHF14O94880 888 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 SSFA2P28290 1259 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 SIK1P57059 783 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 EYA1Q99502 592 aa14.75□□□□□ -0.05
TPM1-227ENST00000560970 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
TPM1-227ENST00000560970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
TPM1-227ENST00000560970 PHKG2P15735 406 aa14.74□□□□□ -0.05
TPM1-227ENST00000560970 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
TPM1-227ENST00000560970 ADAMTS7Q9UKP4 1686 aa14.74□□□□□ -0.05
TPM1-227ENST00000560970 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
TPM1-227ENST00000560970 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 IFNL2Q8IZJ0 200 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 CEP350Q5VT06 3117 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 C10orf71Q711Q0 1435 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 UBR2Q8IWV8 1755 aa14.73□□□□□ -0.05
TPM1-227ENST00000560970 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
TPM1-227ENST00000560970 GNPATO15228 680 aa14.72□□□□□ -0.05
TPM1-227ENST00000560970 EIF4A2Q14240 407 aaKnown RBP14.72□□□□□ -0.05
TPM1-227ENST00000560970 MRC1P22897 1456 aa14.7□□□□□ -0.06
TPM1-227ENST00000560970 ITPK1Q13572 414 aa14.7□□□□□ -0.06
TPM1-227ENST00000560970 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
TPM1-227ENST00000560970 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
TPM1-227ENST00000560970 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
TPM1-227ENST00000560970 TNNT2P45379 298 aaPredicted RBP14.69□□□□□ -0.06
TPM1-227ENST00000560970 PANK3Q9H999 370 aa14.69□□□□□ -0.06
TPM1-227ENST00000560970 TNRC6CQ9HCJ0 1690 aaKnown RBP14.68□□□□□ -0.06
TPM1-227ENST00000560970 SMIM5Q71RC9 77 aa14.68□□□□□ -0.06
TPM1-227ENST00000560970 SIPA1L3O60292 1781 aaPredicted RBP14.68□□□□□ -0.06
TPM1-227ENST00000560970 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
TPM1-227ENST00000560970 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
TPM1-227ENST00000560970 ATG3Q9NT62 314 aa14.67□□□□□ -0.06
TPM1-227ENST00000560970 SCN7AQ01118 1682 aa14.67□□□□□ -0.06
TPM1-227ENST00000560970 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
TPM1-227ENST00000560970 NRXN2Q9P2S2 1712 aa14.66□□□□□ -0.06
TPM1-227ENST00000560970 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
TPM1-227ENST00000560970 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
TPM1-227ENST00000560970 SBF1O95248 1867 aa14.65□□□□□ -0.06
TPM1-227ENST00000560970 ERVV-2B6SEH9 535 aa14.65□□□□□ -0.06
TPM1-227ENST00000560970 WDR90Q96KV7 1748 aa14.65□□□□□ -0.06
TPM1-227ENST00000560970 MMP10P09238 476 aa14.64□□□□□ -0.07
TPM1-227ENST00000560970 ADRA2BP18089 450 aa14.64□□□□□ -0.07
TPM1-227ENST00000560970 ZNF530Q6P9A1 599 aaPredicted RBP14.64□□□□□ -0.07
TPM1-227ENST00000560970 WWC3Q9ULE0 1092 aa14.64□□□□□ -0.07
TPM1-227ENST00000560970 RTCBQ9Y3I0 505 aaKnown RBP14.64□□□□□ -0.07
TPM1-227ENST00000560970 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
TPM1-227ENST00000560970 PLEKHO1Q53GL0 409 aaPredicted RBP14.63□□□□□ -0.07
TPM1-227ENST00000560970 KCPQ6ZWJ8 1503 aa14.62□□□□□ -0.07
TPM1-227ENST00000560970 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
TPM1-227ENST00000560970 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
TPM1-227ENST00000560970 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
TPM1-227ENST00000560970 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
TPM1-227ENST00000560970 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
TPM1-227ENST00000560970 RC3H1Q5TC82 1133 aaKnown RBP14.61□□□□□ -0.07
TPM1-227ENST00000560970 AEBP1Q8IUX7 1158 aa14.61□□□□□ -0.07
TPM1-227ENST00000560970 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
TPM1-227ENST00000560970 CCDC88AQ3V6T2 1871 aa14.61□□□□□ -0.07
TPM1-227ENST00000560970 CABP4P57796 275 aa14.6□□□□□ -0.07
TPM1-227ENST00000560970 TRAPPC3LQ5T215 181 aa14.6□□□□□ -0.07
TPM1-227ENST00000560970 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
TPM1-227ENST00000560970 PER1O15534 1290 aaPredicted RBP14.59□□□□□ -0.07
TPM1-227ENST00000560970 AMER1Q5JTC6 1135 aaPredicted RBP14.59□□□□□ -0.07
TPM1-227ENST00000560970 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
TPM1-227ENST00000560970 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
TPM1-227ENST00000560970 CCDC87Q9NVE4 849 aa14.59□□□□□ -0.07
TPM1-227ENST00000560970 ARFGEF2Q9Y6D5 1785 aa14.59□□□□□ -0.07
TPM1-227ENST00000560970 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
TPM1-227ENST00000560970 RPS6KA4O75676 772 aa14.58□□□□□ -0.08
TPM1-227ENST00000560970 GYS1P13807 737 aa14.58□□□□□ -0.08
TPM1-227ENST00000560970 RFC4P35249 363 aa14.58□□□□□ -0.08
TPM1-227ENST00000560970 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
TPM1-227ENST00000560970 MTHFSP49914 203 aa14.58□□□□□ -0.08
TPM1-227ENST00000560970 TGFB2P61812 414 aa14.58□□□□□ -0.08
TPM1-227ENST00000560970 COL3A1P02461 1466 aaPredicted RBP14.57□□□□□ -0.08
TPM1-227ENST00000560970 SULT6B1Q6IMI4 303 aa14.57□□□□□ -0.08
TPM1-227ENST00000560970 ARHGEF1Q92888 912 aaKnown RBP14.57□□□□□ -0.08
TPM1-227ENST00000560970 KNSTRNQ9Y448 316 aa14.57□□□□□ -0.08
TPM1-227ENST00000560970 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
TPM1-227ENST00000560970 HSPA6P17066 643 aa14.56□□□□□ -0.08
TPM1-227ENST00000560970 CRKLP46109 303 aaKnown RBP14.56□□□□□ -0.08
TPM1-227ENST00000560970 BCS1LQ9Y276 419 aa14.56□□□□□ -0.08
TPM1-227ENST00000560970 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
TPM1-227ENST00000560970 DICER1Q9UPY3 1922 aaKnown RBP14.56□□□□□ -0.08
TPM1-227ENST00000560970 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
TPM1-227ENST00000560970 IL13P35225 146 aa14.55□□□□□ -0.08
TPM1-227ENST00000560970 LAMB4A4D0S4 1761 aa14.54□□□□□ -0.08
TPM1-227ENST00000560970 COL15A1P39059 1388 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 A0A0G2JLW4 131 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 KIF3CO14782 793 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 DPEP1P16444 411 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 AKAP4Q5JQC9 854 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 NFATC2IPQ8NCF5 419 aa14.53□□□□□ -0.08
TPM1-227ENST00000560970 NPC1L1Q9UHC9 1359 aa14.52□□□□□ -0.08
TPM1-227ENST00000560970 FCHSD2O94868 740 aa14.52□□□□□ -0.09
TPM1-227ENST00000560970 CC2D1BQ5T0F9 858 aaKnown RBP14.52□□□□□ -0.09
TPM1-227ENST00000560970 SRP68Q9UHB9 627 aaKnown RBP14.52□□□□□ -0.09
TPM1-227ENST00000560970 FER1L6Q2WGJ9 1857 aa14.52□□□□□ -0.09
TPM1-227ENST00000560970 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms