RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 KCNA6P17658 529 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
ZEB1-220ENST00000560909 TMEM132EQ6IEE7 984 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 SLC26A8Q96RN1 970 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 TESK2Q96S53 571 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 DLC1Q96QB1 1528 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 USP47Q96K76 1375 aa7.72□□□□□ -1.17
ZEB1-220ENST00000560909 STRCQ7RTU9 1775 aa7.71□□□□□ -1.17
ZEB1-220ENST00000560909 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
ZEB1-220ENST00000560909 SLC24A1O60721 1099 aa7.71□□□□□ -1.18
ZEB1-220ENST00000560909 HSPA5P11021 654 aaKnown RBP7.71□□□□□ -1.18
ZEB1-220ENST00000560909 NBR1Q14596 966 aa7.71□□□□□ -1.18
ZEB1-220ENST00000560909 IQGAP1P46940 1657 aa7.7□□□□□ -1.18
ZEB1-220ENST00000560909 ST20-MTHFSA0A0A6YYL1 179 aa7.7□□□□□ -1.18
ZEB1-220ENST00000560909 PUS7Q96PZ0 661 aaKnown RBP7.7□□□□□ -1.18
ZEB1-220ENST00000560909 AMOTL2Q9Y2J4 779 aa7.7□□□□□ -1.18
ZEB1-220ENST00000560909 ROBO2Q9HCK4 1378 aa7.7□□□□□ -1.18
ZEB1-220ENST00000560909 NCOA3Q9Y6Q9 1424 aa7.69□□□□□ -1.18
ZEB1-220ENST00000560909 BMP1P13497 986 aa7.69□□□□□ -1.18
ZEB1-220ENST00000560909 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
ZEB1-220ENST00000560909 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
ZEB1-220ENST00000560909 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
ZEB1-220ENST00000560909 EIF3AQ14152 1382 aaKnown RBP7.69□□□□□ -1.18
ZEB1-220ENST00000560909 POLR1AO95602 1720 aaPredicted RBP7.69□□□□□ -1.18
ZEB1-220ENST00000560909 CPS1P31327 1500 aa7.68□□□□□ -1.18
ZEB1-220ENST00000560909 NWD1Q149M9 1564 aa7.68□□□□□ -1.18
ZEB1-220ENST00000560909 AMER1Q5JTC6 1135 aaPredicted RBP7.68□□□□□ -1.18
ZEB1-220ENST00000560909 BCANQ96GW7 911 aa7.68□□□□□ -1.18
ZEB1-220ENST00000560909 XRN1Q8IZH2 1706 aaKnown RBP7.68□□□□□ -1.18
ZEB1-220ENST00000560909 WNT7AO00755 349 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 MSTNO14793 375 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 MFSD10Q14728 455 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 WAPLQ7Z5K2 1190 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 PRAM1Q96QH2 718 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 STK26Q9P289 416 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 FCF1Q9Y324 198 aaKnown RBP7.67□□□□□ -1.18
ZEB1-220ENST00000560909 PLEKHH1Q9ULM0 1364 aa7.67□□□□□ -1.18
ZEB1-220ENST00000560909 NKTRP30414 1462 aaKnown RBP7.67□□□□□ -1.18
ZEB1-220ENST00000560909 KNDC1Q76NI1 1749 aa7.66□□□□□ -1.18
ZEB1-220ENST00000560909 CHD2O14647 1828 aaKnown RBP7.66□□□□□ -1.18
ZEB1-220ENST00000560909 TRIM46Q7Z4K8 759 aa7.66□□□□□ -1.18
ZEB1-220ENST00000560909 RYDENQ9NUL5 291 aaKnown RBP7.66□□□□□ -1.18
ZEB1-220ENST00000560909 ACTN4O43707 911 aaKnown RBP7.65□□□□□ -1.18
ZEB1-220ENST00000560909 NR1I2O75469 434 aa7.65□□□□□ -1.18
ZEB1-220ENST00000560909 ARHGEF28Q8N1W1 1705 aaKnown RBP7.64□□□□□ -1.19
ZEB1-220ENST00000560909 WASHC2AQ641Q2 1341 aa7.64□□□□□ -1.19
ZEB1-220ENST00000560909 ZNF335Q9H4Z2 1342 aaPredicted RBP7.64□□□□□ -1.19
ZEB1-220ENST00000560909 TMF1P82094 1093 aa7.64□□□□□ -1.19
ZEB1-220ENST00000560909 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
ZEB1-220ENST00000560909 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
ZEB1-220ENST00000560909 POGKQ9P215 609 aa7.64□□□□□ -1.19
ZEB1-220ENST00000560909 CCDC7Q96M83 1385 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 DISP3Q9P2K9 1392 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 KIF7Q2M1P5 1343 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 EVC2Q86UK5 1308 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-220ENST00000560909 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 MRGPRX2Q96LB1 330 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-220ENST00000560909 LTBP4Q8N2S1 1624 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 ADGRB2O60241 1585 aa7.63□□□□□ -1.19
ZEB1-220ENST00000560909 LRRC7Q96NW7 1537 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 ADGRL3Q9HAR2 1447 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 TMEM94Q12767 1356 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 PROSER2Q86WR7 435 aaPredicted RBP7.62□□□□□ -1.19
ZEB1-220ENST00000560909 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 TULP4Q9NRJ4 1543 aa7.62□□□□□ -1.19
ZEB1-220ENST00000560909 DCCP43146 1447 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.61□□□□□ -1.19
ZEB1-220ENST00000560909 MINK1Q8N4C8 1332 aaPredicted RBP7.61□□□□□ -1.19
ZEB1-220ENST00000560909 SPSB2Q99619 263 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 CDK19Q9BWU1 502 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 ANKARQ7Z5J8 1434 aa7.61□□□□□ -1.19
ZEB1-220ENST00000560909 ATAD2Q6PL18 1390 aa7.6□□□□□ -1.19
ZEB1-220ENST00000560909 NINLQ9Y2I6 1382 aa7.6□□□□□ -1.19
ZEB1-220ENST00000560909 PRR36Q9H6K5 1346 aa7.6□□□□□ -1.19
ZEB1-220ENST00000560909 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
ZEB1-220ENST00000560909 K7ELQ4 463 aaPredicted RBP7.6□□□□□ -1.19
ZEB1-220ENST00000560909 DPYSL4O14531 572 aa7.6□□□□□ -1.19
ZEB1-220ENST00000560909 SAFB2Q14151 953 aaKnown RBP eCLIP7.6□□□□□ -1.19
ZEB1-220ENST00000560909 CDC42BPGQ6DT37 1551 aa7.59□□□□□ -1.19
ZEB1-220ENST00000560909 NUDT16Q96DE0 195 aaKnown RBP7.59□□□□□ -1.19
ZEB1-220ENST00000560909 QRICH2Q9H0J4 1663 aa7.58□□□□□ -1.2
ZEB1-220ENST00000560909 ATP7BP35670 1465 aa7.58□□□□□ -1.2
ZEB1-220ENST00000560909 PER1O15534 1290 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-220ENST00000560909 ZBTB24O43167 697 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-220ENST00000560909 NKX1-1Q15270 411 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-220ENST00000560909 CADPS2Q86UW7 1296 aa7.58□□□□□ -1.2
ZEB1-220ENST00000560909 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
ZEB1-220ENST00000560909 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
ZEB1-220ENST00000560909 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
ZEB1-220ENST00000560909 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
ZEB1-220ENST00000560909 CPSF1Q10570 1443 aaKnown RBP7.57□□□□□ -1.2
ZEB1-220ENST00000560909 POLR3AO14802 1390 aaPredicted RBP7.57□□□□□ -1.2
ZEB1-220ENST00000560909 MSH6P52701 1360 aa7.57□□□□□ -1.2
ZEB1-220ENST00000560909 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms