RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
RABGGTA-218ENST00000560777 CEMIPQ8WUJ3 1361 aa15.79■□□□□ 0.12
RABGGTA-218ENST00000560777 KCNQ4P56696 695 aa15.79■□□□□ 0.12
RABGGTA-218ENST00000560777 RIPK4P57078 832 aa15.79■□□□□ 0.12
RABGGTA-218ENST00000560777 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
RABGGTA-218ENST00000560777 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
RABGGTA-218ENST00000560777 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
RABGGTA-218ENST00000560777 TEFQ10587 303 aa15.77■□□□□ 0.12
RABGGTA-218ENST00000560777 MIER1Q8N108 512 aa15.77■□□□□ 0.12
RABGGTA-218ENST00000560777 CCNL1Q9UK58 526 aaPredicted RBP15.77■□□□□ 0.12
RABGGTA-218ENST00000560777 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
RABGGTA-218ENST00000560777 MRC1P22897 1456 aa15.77■□□□□ 0.11
RABGGTA-218ENST00000560777 RREB1Q92766 1687 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 LOC102724428A0A0B4J2F2 783 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 APAF1O14727 1248 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 SIK1P57059 783 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 LY75O60449 1722 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
RABGGTA-218ENST00000560777 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
RABGGTA-218ENST00000560777 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
RABGGTA-218ENST00000560777 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
RABGGTA-218ENST00000560777 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-218ENST00000560777 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
RABGGTA-218ENST00000560777 PTCD1O75127 700 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-218ENST00000560777 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-218ENST00000560777 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-218ENST00000560777 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
RABGGTA-218ENST00000560777 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
RABGGTA-218ENST00000560777 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
RABGGTA-218ENST00000560777 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-218ENST00000560777 ITPK1Q13572 414 aa15.72■□□□□ 0.11
RABGGTA-218ENST00000560777 R3HDM1Q15032 1099 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-218ENST00000560777 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
RABGGTA-218ENST00000560777 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
RABGGTA-218ENST00000560777 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 KCNQ3O43525 872 aa15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 SLC15A2Q16348 729 aa15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 SIPA1L3O60292 1781 aaPredicted RBP15.71■□□□□ 0.11
RABGGTA-218ENST00000560777 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
RABGGTA-218ENST00000560777 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
RABGGTA-218ENST00000560777 LINC00116Q8NCU8 138 aa15.7■□□□□ 0.1
RABGGTA-218ENST00000560777 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
RABGGTA-218ENST00000560777 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
RABGGTA-218ENST00000560777 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-218ENST00000560777 PAPPAQ13219 1627 aa15.68■□□□□ 0.1
RABGGTA-218ENST00000560777 KCPQ6ZWJ8 1503 aa15.68■□□□□ 0.1
RABGGTA-218ENST00000560777 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
RABGGTA-218ENST00000560777 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 PDGFDQ9GZP0 370 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 TFCP2L1Q9NZI6 479 aa15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 ZNF831Q5JPB2 1677 aa15.66■□□□□ 0.1
RABGGTA-218ENST00000560777 C5P01031 1676 aa15.65■□□□□ 0.1
RABGGTA-218ENST00000560777 CHL1O00533 1208 aa15.65■□□□□ 0.1
RABGGTA-218ENST00000560777 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
RABGGTA-218ENST00000560777 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-218ENST00000560777 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
RABGGTA-218ENST00000560777 UBR2Q8IWV8 1755 aa15.64■□□□□ 0.1
RABGGTA-218ENST00000560777 HEG1Q9ULI3 1381 aa15.64■□□□□ 0.09
RABGGTA-218ENST00000560777 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-218ENST00000560777 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
RABGGTA-218ENST00000560777 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
RABGGTA-218ENST00000560777 C4BP0C0L5 1744 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 INTS5Q6P9B9 1019 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 AK7Q96M32 723 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 SALL2Q9Y467 1007 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 CNTNAP4Q9C0A0 1308 aa15.63■□□□□ 0.09
RABGGTA-218ENST00000560777 PRAMEF22A3QJZ6 481 aa15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 TEX13AQ9BXU3 409 aaPredicted RBP15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 USP16Q9Y5T5 823 aa15.62■□□□□ 0.09
RABGGTA-218ENST00000560777 TJP1Q07157 1748 aa15.61■□□□□ 0.09
RABGGTA-218ENST00000560777 GNPATO15228 680 aa15.61■□□□□ 0.09
RABGGTA-218ENST00000560777 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
RABGGTA-218ENST00000560777 MYH14Q7Z406 1995 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 COL5A3P25940 1745 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 RPS6KA4O75676 772 aa15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 STARD3NLO95772 234 aa15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
RABGGTA-218ENST00000560777 CICQ96RK0 1608 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms