RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 CABP4P57796 275 aa25.24■■□□□ 1.63
TPM1-224ENST00000560615 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
TPM1-224ENST00000560615 CHD4Q14839 1912 aa25.24■■□□□ 1.63
TPM1-224ENST00000560615 RBM42Q9BTD8 480 aaKnown RBP25.22■■□□□ 1.63
TPM1-224ENST00000560615 MTHFSP49914 203 aa25.21■■□□□ 1.63
TPM1-224ENST00000560615 ITPK1Q13572 414 aa25.21■■□□□ 1.63
TPM1-224ENST00000560615 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
TPM1-224ENST00000560615 TAF1LQ8IZX4 1826 aa25.21■■□□□ 1.63
TPM1-224ENST00000560615 YBX3P16989 372 aaKnown RBP eCLIP25.19■■□□□ 1.62
TPM1-224ENST00000560615 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
TPM1-224ENST00000560615 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
TPM1-224ENST00000560615 GIGYF1O75420 1035 aaPredicted RBP25.17■■□□□ 1.62
TPM1-224ENST00000560615 ADRA2BP18089 450 aa25.17■■□□□ 1.62
TPM1-224ENST00000560615 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
TPM1-224ENST00000560615 AMIGO3Q86WK7 504 aa25.17■■□□□ 1.62
TPM1-224ENST00000560615 C1QTNF8P60827 252 aa25.16■■□□□ 1.62
TPM1-224ENST00000560615 NLGN1Q8N2Q7 840 aa25.16■■□□□ 1.62
TPM1-224ENST00000560615 SMIM5Q71RC9 77 aa25.14■■□□□ 1.62
TPM1-224ENST00000560615 AEBP1Q8IUX7 1158 aa25.14■■□□□ 1.62
TPM1-224ENST00000560615 IL13P35225 146 aa25.13■■□□□ 1.61
TPM1-224ENST00000560615 RFC4P35249 363 aa25.13■■□□□ 1.61
TPM1-224ENST00000560615 KDRP35968 1356 aa25.13■■□□□ 1.61
TPM1-224ENST00000560615 CNTNAP4Q9C0A0 1308 aa25.12■■□□□ 1.61
TPM1-224ENST00000560615 AMER1Q5JTC6 1135 aaPredicted RBP25.12■■□□□ 1.61
TPM1-224ENST00000560615 UBR3Q6ZT12 1888 aa25.12■■□□□ 1.61
TPM1-224ENST00000560615 UTRNP46939 3433 aa25.12■■□□□ 1.61
TPM1-224ENST00000560615 KIF7Q2M1P5 1343 aa25.12■■□□□ 1.61
TPM1-224ENST00000560615 RPS6KA4O75676 772 aa25.11■■□□□ 1.61
TPM1-224ENST00000560615 MMP10P09238 476 aa25.11■■□□□ 1.61
TPM1-224ENST00000560615 NFATC2IPQ8NCF5 419 aa25.11■■□□□ 1.61
TPM1-224ENST00000560615 AKAP4Q5JQC9 854 aa25.1■■□□□ 1.61
TPM1-224ENST00000560615 KDM6AO15550 1401 aaPredicted RBP25.1■■□□□ 1.61
TPM1-224ENST00000560615 SENP3-EIF4A1A0A087X0R7 540 aa25.09■■□□□ 1.61
TPM1-224ENST00000560615 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
TPM1-224ENST00000560615 ARHGEF1Q92888 912 aaKnown RBP25.09■■□□□ 1.61
TPM1-224ENST00000560615 SLC4A9Q96Q91 983 aa25.08■■□□□ 1.61
TPM1-224ENST00000560615 TGFB2P61812 414 aa25.07■■□□□ 1.6
TPM1-224ENST00000560615 CCDC87Q9NVE4 849 aa25.07■■□□□ 1.6
TPM1-224ENST00000560615 PARP3Q9Y6F1 533 aa25.06■■□□□ 1.6
TPM1-224ENST00000560615 ZNF831Q5JPB2 1677 aa25.05■■□□□ 1.6
TPM1-224ENST00000560615 DIAPH1O60610 1272 aaKnown RBP25.05■■□□□ 1.6
TPM1-224ENST00000560615 GPBP1L1Q9HC44 474 aaPredicted RBP25.04■■□□□ 1.6
TPM1-224ENST00000560615 CRKLP46109 303 aaKnown RBP25.03■■□□□ 1.6
TPM1-224ENST00000560615 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
TPM1-224ENST00000560615 GYS1P13807 737 aa25.02■■□□□ 1.6
TPM1-224ENST00000560615 SLC52A2Q9HAB3 445 aa25.02■■□□□ 1.6
TPM1-224ENST00000560615 PER1O15534 1290 aaPredicted RBP25.01■■□□□ 1.59
TPM1-224ENST00000560615 HMOX1P09601 288 aa25.01■■□□□ 1.59
TPM1-224ENST00000560615 WWC3Q9ULE0 1092 aa25.01■■□□□ 1.59
TPM1-224ENST00000560615 ATP10DQ9P241 1426 aa25.01■■□□□ 1.59
TPM1-224ENST00000560615 RNMTO43148 476 aaKnown RBP24.98■■□□□ 1.59
TPM1-224ENST00000560615 BCS1LQ9Y276 419 aa24.97■■□□□ 1.59
TPM1-224ENST00000560615 NPC1L1Q9UHC9 1359 aa24.96■■□□□ 1.59
TPM1-224ENST00000560615 ZPR1O75312 459 aa24.96■■□□□ 1.59
TPM1-224ENST00000560615 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
TPM1-224ENST00000560615 USP42Q9H9J4 1324 aaKnown RBP24.95■■□□□ 1.58
TPM1-224ENST00000560615 A0A0G2JLW4 131 aa24.95■■□□□ 1.58
TPM1-224ENST00000560615 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.58
TPM1-224ENST00000560615 CICQ96RK0 1608 aaPredicted RBP24.94■■□□□ 1.58
TPM1-224ENST00000560615 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
TPM1-224ENST00000560615 PXDNLA1KZ92 1463 aa24.94■■□□□ 1.58
TPM1-224ENST00000560615 GOLGB1Q14789 3259 aaKnown RBP24.93■■□□□ 1.58
TPM1-224ENST00000560615 COL5A3P25940 1745 aaPredicted RBP24.93■■□□□ 1.58
TPM1-224ENST00000560615 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
TPM1-224ENST00000560615 DNAJC10Q8IXB1 793 aa24.93■■□□□ 1.58
TPM1-224ENST00000560615 ZNF526Q8TF50 670 aaPredicted RBP24.93■■□□□ 1.58
TPM1-224ENST00000560615 ADCY9O60503 1353 aa24.93■■□□□ 1.58
TPM1-224ENST00000560615 FCHSD2O94868 740 aa24.92■■□□□ 1.58
TPM1-224ENST00000560615 INTS5Q6P9B9 1019 aaKnown RBP24.92■■□□□ 1.58
TPM1-224ENST00000560615 TTC5Q8N0Z6 440 aa24.92■■□□□ 1.58
TPM1-224ENST00000560615 VSIG10Q8N0Z9 540 aa24.92■■□□□ 1.58
TPM1-224ENST00000560615 GAS2L2Q8NHY3 880 aa24.92■■□□□ 1.58
TPM1-224ENST00000560615 DPEP1P16444 411 aa24.91■■□□□ 1.58
TPM1-224ENST00000560615 CFAP53Q96M91 514 aa24.91■■□□□ 1.58
TPM1-224ENST00000560615 PIM2Q9P1W9 311 aa24.91■■□□□ 1.58
TPM1-224ENST00000560615 SRP68Q9UHB9 627 aaKnown RBP24.91■■□□□ 1.58
TPM1-224ENST00000560615 SLC39A6Q13433 755 aa24.9■■□□□ 1.58
TPM1-224ENST00000560615 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
TPM1-224ENST00000560615 FKBP8Q14318 412 aa24.9■■□□□ 1.58
TPM1-224ENST00000560615 ARHGAP27Q6ZUM4 889 aa24.9■■□□□ 1.58
TPM1-224ENST00000560615 CYP19A1P11511 503 aaPredicted RBP24.89■■□□□ 1.58
TPM1-224ENST00000560615 TEFQ10587 303 aa24.89■■□□□ 1.58
TPM1-224ENST00000560615 C4AP0C0L4 1744 aa24.89■■□□□ 1.57
TPM1-224ENST00000560615 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
TPM1-224ENST00000560615 GNAT3A8MTJ3 354 aa24.87■■□□□ 1.57
TPM1-224ENST00000560615 STARD3NLO95772 234 aa24.87■■□□□ 1.57
TPM1-224ENST00000560615 MRC1P22897 1456 aa24.87■■□□□ 1.57
TPM1-224ENST00000560615 SOS1Q07889 1333 aaPredicted RBP24.86■■□□□ 1.57
TPM1-224ENST00000560615 DALRD3Q5D0E6 543 aaKnown RBP24.86■■□□□ 1.57
TPM1-224ENST00000560615 USPL1Q5W0Q7 1092 aa24.86■■□□□ 1.57
TPM1-224ENST00000560615 TEX13AQ9BXU3 409 aaPredicted RBP24.86■■□□□ 1.57
TPM1-224ENST00000560615 NARFQ9UHQ1 456 aa24.86■■□□□ 1.57
TPM1-224ENST00000560615 NUDCQ9Y266 331 aa24.86■■□□□ 1.57
TPM1-224ENST00000560615 KIF13BQ9NQT8 1826 aa24.85■■□□□ 1.57
TPM1-224ENST00000560615 TM4SF1P30408 202 aa24.85■■□□□ 1.57
TPM1-224ENST00000560615 A0A087WZG4 1122 aa24.84■■□□□ 1.57
TPM1-224ENST00000560615 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
TPM1-224ENST00000560615 POLRMTO00411 1230 aaKnown RBP24.83■■□□□ 1.57
TPM1-224ENST00000560615 DDR1Q08345 913 aa24.83■■□□□ 1.57
TPM1-224ENST00000560615 MYH14Q7Z406 1995 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 1192.5 ms