RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
MARK3-221ENST00000560603 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
MARK3-221ENST00000560603 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
MARK3-221ENST00000560603 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
MARK3-221ENST00000560603 TGFB2P61812 414 aa16.62■□□□□ 0.25
MARK3-221ENST00000560603 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
MARK3-221ENST00000560603 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
MARK3-221ENST00000560603 ERVV-2B6SEH9 535 aa16.61■□□□□ 0.25
MARK3-221ENST00000560603 ADRA2BP18089 450 aa16.61■□□□□ 0.25
MARK3-221ENST00000560603 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
MARK3-221ENST00000560603 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
MARK3-221ENST00000560603 RC3H1Q5TC82 1133 aaKnown RBP16.6■□□□□ 0.25
MARK3-221ENST00000560603 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
MARK3-221ENST00000560603 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
MARK3-221ENST00000560603 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
MARK3-221ENST00000560603 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
MARK3-221ENST00000560603 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
MARK3-221ENST00000560603 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
MARK3-221ENST00000560603 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
MARK3-221ENST00000560603 KIF3CO14782 793 aa16.57■□□□□ 0.24
MARK3-221ENST00000560603 RFC4P35249 363 aa16.57■□□□□ 0.24
MARK3-221ENST00000560603 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
MARK3-221ENST00000560603 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
MARK3-221ENST00000560603 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
MARK3-221ENST00000560603 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
MARK3-221ENST00000560603 KDRP35968 1356 aa16.56■□□□□ 0.24
MARK3-221ENST00000560603 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
MARK3-221ENST00000560603 CABP4P57796 275 aa16.56■□□□□ 0.24
MARK3-221ENST00000560603 TRIM26Q12899 539 aaPredicted RBP16.56■□□□□ 0.24
MARK3-221ENST00000560603 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
MARK3-221ENST00000560603 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
MARK3-221ENST00000560603 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
MARK3-221ENST00000560603 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
MARK3-221ENST00000560603 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
MARK3-221ENST00000560603 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 FCHSD2O94868 740 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 GYS1P13807 737 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 APLP1P51693 650 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
MARK3-221ENST00000560603 TOMM70O94826 608 aa16.53■□□□□ 0.24
MARK3-221ENST00000560603 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
MARK3-221ENST00000560603 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
MARK3-221ENST00000560603 DPEP1P16444 411 aa16.52■□□□□ 0.24
MARK3-221ENST00000560603 MTHFSP49914 203 aa16.52■□□□□ 0.24
MARK3-221ENST00000560603 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
MARK3-221ENST00000560603 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
MARK3-221ENST00000560603 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
MARK3-221ENST00000560603 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
MARK3-221ENST00000560603 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
MARK3-221ENST00000560603 PANK3Q9H999 370 aa16.49■□□□□ 0.23
MARK3-221ENST00000560603 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
MARK3-221ENST00000560603 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
MARK3-221ENST00000560603 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
MARK3-221ENST00000560603 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
MARK3-221ENST00000560603 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
MARK3-221ENST00000560603 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
MARK3-221ENST00000560603 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
MARK3-221ENST00000560603 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
MARK3-221ENST00000560603 C9orf131Q5VYM1 1079 aa16.47■□□□□ 0.23
MARK3-221ENST00000560603 NFATC2IPQ8NCF5 419 aa16.47■□□□□ 0.23
MARK3-221ENST00000560603 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
MARK3-221ENST00000560603 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
MARK3-221ENST00000560603 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.22
MARK3-221ENST00000560603 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
MARK3-221ENST00000560603 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
MARK3-221ENST00000560603 KCNA3P22001 575 aa16.45■□□□□ 0.22
MARK3-221ENST00000560603 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
MARK3-221ENST00000560603 ZPR1O75312 459 aa16.44■□□□□ 0.22
MARK3-221ENST00000560603 FKBP8Q14318 412 aa16.44■□□□□ 0.22
MARK3-221ENST00000560603 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
MARK3-221ENST00000560603 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
MARK3-221ENST00000560603 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
MARK3-221ENST00000560603 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
MARK3-221ENST00000560603 FSTL1Q12841 308 aa16.43■□□□□ 0.22
MARK3-221ENST00000560603 DNAJC5GQ8N7S2 189 aa16.43■□□□□ 0.22
MARK3-221ENST00000560603 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
MARK3-221ENST00000560603 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
MARK3-221ENST00000560603 DDR1Q08345 913 aa16.42■□□□□ 0.22
MARK3-221ENST00000560603 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
MARK3-221ENST00000560603 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
MARK3-221ENST00000560603 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
MARK3-221ENST00000560603 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
MARK3-221ENST00000560603 TM4SF1P30408 202 aa16.4■□□□□ 0.22
MARK3-221ENST00000560603 IL13P35225 146 aa16.4■□□□□ 0.22
MARK3-221ENST00000560603 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
MARK3-221ENST00000560603 CHRNA5P30532 468 aa16.39■□□□□ 0.21
MARK3-221ENST00000560603 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
MARK3-221ENST00000560603 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
MARK3-221ENST00000560603 ZC3H4Q9UPT8 1303 aaKnown RBP16.39■□□□□ 0.21
MARK3-221ENST00000560603 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
MARK3-221ENST00000560603 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
MARK3-221ENST00000560603 TJP1Q07157 1748 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 KCPQ6ZWJ8 1503 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
MARK3-221ENST00000560603 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
MARK3-221ENST00000560603 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms