RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 ITPK1Q13572 414 aa19.85■□□□□ 0.77
IRF9-210ENST00000560542 DNAJC5GQ8N7S2 189 aa19.85■□□□□ 0.77
IRF9-210ENST00000560542 ADRA2BP18089 450 aa19.84■□□□□ 0.77
IRF9-210ENST00000560542 SMIM5Q71RC9 77 aa19.84■□□□□ 0.77
IRF9-210ENST00000560542 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
IRF9-210ENST00000560542 ASAP1Q9ULH1 1129 aa19.83■□□□□ 0.77
IRF9-210ENST00000560542 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
IRF9-210ENST00000560542 KDRP35968 1356 aa19.83■□□□□ 0.76
IRF9-210ENST00000560542 WASHC2AQ641Q2 1341 aa19.82■□□□□ 0.76
IRF9-210ENST00000560542 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
IRF9-210ENST00000560542 BCS1LQ9Y276 419 aa19.82■□□□□ 0.76
IRF9-210ENST00000560542 RTCBQ9Y3I0 505 aaKnown RBP19.82■□□□□ 0.76
IRF9-210ENST00000560542 PHKG2P15735 406 aa19.81■□□□□ 0.76
IRF9-210ENST00000560542 TRAPPC3LQ5T215 181 aa19.81■□□□□ 0.76
IRF9-210ENST00000560542 RBM46Q8TBY0 533 aaKnown RBP19.81■□□□□ 0.76
IRF9-210ENST00000560542 CCDC87Q9NVE4 849 aa19.81■□□□□ 0.76
IRF9-210ENST00000560542 ATG3Q9NT62 314 aa19.8■□□□□ 0.76
IRF9-210ENST00000560542 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
IRF9-210ENST00000560542 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
IRF9-210ENST00000560542 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
IRF9-210ENST00000560542 RC3H1Q5TC82 1133 aaKnown RBP19.79■□□□□ 0.76
IRF9-210ENST00000560542 WDR90Q96KV7 1748 aa19.79■□□□□ 0.76
IRF9-210ENST00000560542 A0A0G2JLW4 131 aa19.78■□□□□ 0.76
IRF9-210ENST00000560542 ARHGAP27Q6ZUM4 889 aa19.78■□□□□ 0.76
IRF9-210ENST00000560542 EYA1Q99502 592 aa19.78■□□□□ 0.76
IRF9-210ENST00000560542 CNTNAP4Q9C0A0 1308 aa19.77■□□□□ 0.76
IRF9-210ENST00000560542 FSTL1Q12841 308 aa19.77■□□□□ 0.76
IRF9-210ENST00000560542 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
IRF9-210ENST00000560542 ARFGEF1Q9Y6D6 1849 aa19.76■□□□□ 0.75
IRF9-210ENST00000560542 ERVV-2B6SEH9 535 aa19.76■□□□□ 0.75
IRF9-210ENST00000560542 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
IRF9-210ENST00000560542 FCHSD2O94868 740 aa19.76■□□□□ 0.75
IRF9-210ENST00000560542 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
IRF9-210ENST00000560542 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
IRF9-210ENST00000560542 GYS1P13807 737 aa19.75■□□□□ 0.75
IRF9-210ENST00000560542 DPEP1P16444 411 aa19.75■□□□□ 0.75
IRF9-210ENST00000560542 C16orf71Q8IYS4 520 aaPredicted RBP19.75■□□□□ 0.75
IRF9-210ENST00000560542 PARP3Q9Y6F1 533 aa19.75■□□□□ 0.75
IRF9-210ENST00000560542 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
IRF9-210ENST00000560542 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
IRF9-210ENST00000560542 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
IRF9-210ENST00000560542 RFC4P35249 363 aa19.74■□□□□ 0.75
IRF9-210ENST00000560542 JMYQ8N9B5 988 aa19.74■□□□□ 0.75
IRF9-210ENST00000560542 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
IRF9-210ENST00000560542 KLRG1Q96E93 195 aa19.74■□□□□ 0.75
IRF9-210ENST00000560542 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
IRF9-210ENST00000560542 DCAF5Q96JK2 942 aa19.72■□□□□ 0.75
IRF9-210ENST00000560542 SLC4A9Q96Q91 983 aa19.72■□□□□ 0.75
IRF9-210ENST00000560542 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
IRF9-210ENST00000560542 KCNA3P22001 575 aa19.71■□□□□ 0.75
IRF9-210ENST00000560542 POLKQ9UBT6 870 aa19.7■□□□□ 0.74
IRF9-210ENST00000560542 TNRC6CQ9HCJ0 1690 aaKnown RBP19.7■□□□□ 0.74
IRF9-210ENST00000560542 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
IRF9-210ENST00000560542 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
IRF9-210ENST00000560542 ZC3H4Q9UPT8 1303 aaKnown RBP19.69■□□□□ 0.74
IRF9-210ENST00000560542 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
IRF9-210ENST00000560542 KCPQ6ZWJ8 1503 aa19.67■□□□□ 0.74
IRF9-210ENST00000560542 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
IRF9-210ENST00000560542 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
IRF9-210ENST00000560542 RNF181Q9P0P0 153 aa19.66■□□□□ 0.74
IRF9-210ENST00000560542 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
IRF9-210ENST00000560542 CABP4P57796 275 aa19.65■□□□□ 0.74
IRF9-210ENST00000560542 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
IRF9-210ENST00000560542 SMC1BQ8NDV3 1235 aa19.65■□□□□ 0.74
IRF9-210ENST00000560542 USP42Q9H9J4 1324 aaKnown RBP19.65■□□□□ 0.74
IRF9-210ENST00000560542 COL13A1Q5TAT6 717 aaPredicted RBP19.64■□□□□ 0.73
IRF9-210ENST00000560542 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
IRF9-210ENST00000560542 DDR1Q08345 913 aa19.62■□□□□ 0.73
IRF9-210ENST00000560542 SBF1O95248 1867 aa19.61■□□□□ 0.73
IRF9-210ENST00000560542 HTRA3P83110 453 aa19.61■□□□□ 0.73
IRF9-210ENST00000560542 FKBP8Q14318 412 aa19.61■□□□□ 0.73
IRF9-210ENST00000560542 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
IRF9-210ENST00000560542 RRAGCQ9HB90 399 aa19.61■□□□□ 0.73
IRF9-210ENST00000560542 MTHFSP49914 203 aa19.6■□□□□ 0.73
IRF9-210ENST00000560542 TNS4Q8IZW8 715 aa19.6■□□□□ 0.73
IRF9-210ENST00000560542 TJP1Q07157 1748 aa19.59■□□□□ 0.73
IRF9-210ENST00000560542 POLRMTO00411 1230 aaKnown RBP19.59■□□□□ 0.73
IRF9-210ENST00000560542 PTCD1O75127 700 aaKnown RBP19.59■□□□□ 0.73
IRF9-210ENST00000560542 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
IRF9-210ENST00000560542 SRP68Q9UHB9 627 aaKnown RBP19.59■□□□□ 0.73
IRF9-210ENST00000560542 ADAMTS7Q9UKP4 1686 aa19.59■□□□□ 0.73
IRF9-210ENST00000560542 TM4SF1P30408 202 aa19.58■□□□□ 0.72
IRF9-210ENST00000560542 PRELPP51888 382 aa19.58■□□□□ 0.72
IRF9-210ENST00000560542 CHRNA5P30532 468 aa19.57■□□□□ 0.72
IRF9-210ENST00000560542 ZPR1O75312 459 aa19.56■□□□□ 0.72
IRF9-210ENST00000560542 LMNB1P20700 586 aa19.56■□□□□ 0.72
IRF9-210ENST00000560542 NFATC2IPQ8NCF5 419 aa19.56■□□□□ 0.72
IRF9-210ENST00000560542 VEGFAP15692 232 aaPredicted RBP19.55■□□□□ 0.72
IRF9-210ENST00000560542 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
IRF9-210ENST00000560542 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
IRF9-210ENST00000560542 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
IRF9-210ENST00000560542 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
IRF9-210ENST00000560542 NRXN2Q9P2S2 1712 aa19.54■□□□□ 0.72
IRF9-210ENST00000560542 SOS1Q07889 1333 aaPredicted RBP19.53■□□□□ 0.72
IRF9-210ENST00000560542 PCNTO95613 3336 aa19.53■□□□□ 0.72
IRF9-210ENST00000560542 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
IRF9-210ENST00000560542 CAPN15O75808 1086 aa19.51■□□□□ 0.71
IRF9-210ENST00000560542 RASSF7Q02833 373 aa19.51■□□□□ 0.71
IRF9-210ENST00000560542 USPL1Q5W0Q7 1092 aa19.51■□□□□ 0.71
IRF9-210ENST00000560542 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms