RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 MCM10Q7L590 875 aa24.71■■□□□ 1.55
AC055874.1-202ENST00000559457 RTF1Q92541 710 aaKnown RBP24.71■■□□□ 1.55
AC055874.1-202ENST00000559457 SIPA1L3O60292 1781 aaPredicted RBP24.71■■□□□ 1.55
AC055874.1-202ENST00000559457 PALLDQ8WX93 1383 aa24.7■■□□□ 1.55
AC055874.1-202ENST00000559457 ATG3Q9NT62 314 aa24.7■■□□□ 1.54
AC055874.1-202ENST00000559457 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
AC055874.1-202ENST00000559457 TMPOP42166 694 aaKnown RBP24.69■■□□□ 1.54
AC055874.1-202ENST00000559457 KCNQ4P56696 695 aa24.69■■□□□ 1.54
AC055874.1-202ENST00000559457 SMARCC1Q92922 1105 aaPredicted RBP24.69■■□□□ 1.54
AC055874.1-202ENST00000559457 CEMIPQ8WUJ3 1361 aa24.68■■□□□ 1.54
AC055874.1-202ENST00000559457 RIPK4P57078 832 aa24.68■■□□□ 1.54
AC055874.1-202ENST00000559457 MIER1Q8N108 512 aa24.68■■□□□ 1.54
AC055874.1-202ENST00000559457 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
AC055874.1-202ENST00000559457 TEFQ10587 303 aa24.67■■□□□ 1.54
AC055874.1-202ENST00000559457 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
AC055874.1-202ENST00000559457 FAM9BQ8IZU0 186 aa24.67■■□□□ 1.54
AC055874.1-202ENST00000559457 LRRC4BQ9NT99 713 aa24.66■■□□□ 1.54
AC055874.1-202ENST00000559457 PAPPAQ13219 1627 aa24.65■■□□□ 1.54
AC055874.1-202ENST00000559457 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
AC055874.1-202ENST00000559457 APAF1O14727 1248 aa24.65■■□□□ 1.54
AC055874.1-202ENST00000559457 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
AC055874.1-202ENST00000559457 CCNL1Q9UK58 526 aaPredicted RBP24.65■■□□□ 1.54
AC055874.1-202ENST00000559457 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.54
AC055874.1-202ENST00000559457 SLC39A6Q13433 755 aa24.64■■□□□ 1.54
AC055874.1-202ENST00000559457 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
AC055874.1-202ENST00000559457 SLC27A3Q5K4L6 730 aa24.63■■□□□ 1.53
AC055874.1-202ENST00000559457 RBM42Q9BTD8 480 aaKnown RBP24.62■■□□□ 1.53
AC055874.1-202ENST00000559457 LOC102724428A0A0B4J2F2 783 aa24.61■■□□□ 1.53
AC055874.1-202ENST00000559457 SIK1P57059 783 aa24.61■■□□□ 1.53
AC055874.1-202ENST00000559457 C5P01031 1676 aa24.61■■□□□ 1.53
AC055874.1-202ENST00000559457 PTCD1O75127 700 aaKnown RBP24.6■■□□□ 1.53
AC055874.1-202ENST00000559457 ANO8Q9HCE9 1232 aaPredicted RBP24.6■■□□□ 1.53
AC055874.1-202ENST00000559457 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
AC055874.1-202ENST00000559457 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
AC055874.1-202ENST00000559457 NBPF14Q5TI25 921 aa24.59■■□□□ 1.53
AC055874.1-202ENST00000559457 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
AC055874.1-202ENST00000559457 BTBD11A6QL63 1104 aa24.58■■□□□ 1.53
AC055874.1-202ENST00000559457 SLC4A9Q96Q91 983 aa24.58■■□□□ 1.53
AC055874.1-202ENST00000559457 KCPQ6ZWJ8 1503 aa24.57■■□□□ 1.52
AC055874.1-202ENST00000559457 PSDA5PKW4 1024 aaPredicted RBP24.57■■□□□ 1.52
AC055874.1-202ENST00000559457 ATP6V1AP38606 617 aa24.57■■□□□ 1.52
AC055874.1-202ENST00000559457 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 KCNQ3O43525 872 aa24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 ITPK1Q13572 414 aa24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 R3HDM1Q15032 1099 aaKnown RBP24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 TAF7Q15545 349 aaPredicted RBP24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 MIS18AQ9NYP9 233 aa24.56■■□□□ 1.52
AC055874.1-202ENST00000559457 ZNF827Q17R98 1081 aa24.55■■□□□ 1.52
AC055874.1-202ENST00000559457 ZNF790Q6PG37 636 aa24.55■■□□□ 1.52
AC055874.1-202ENST00000559457 TTC5Q8N0Z6 440 aa24.55■■□□□ 1.52
AC055874.1-202ENST00000559457 STK32BQ9NY57 414 aa24.55■■□□□ 1.52
AC055874.1-202ENST00000559457 TJP1Q07157 1748 aa24.55■■□□□ 1.52
AC055874.1-202ENST00000559457 TUBGCP6Q96RT7 1819 aa24.54■■□□□ 1.52
AC055874.1-202ENST00000559457 C4BP0C0L5 1744 aa24.54■■□□□ 1.52
AC055874.1-202ENST00000559457 KDM3BQ7LBC6 1761 aa24.54■■□□□ 1.52
AC055874.1-202ENST00000559457 COL5A3P25940 1745 aaPredicted RBP24.53■■□□□ 1.52
AC055874.1-202ENST00000559457 LINC00116Q8NCU8 138 aa24.53■■□□□ 1.52
AC055874.1-202ENST00000559457 SLC15A2Q16348 729 aa24.52■■□□□ 1.52
AC055874.1-202ENST00000559457 AKT1S1Q96B36 256 aa24.52■■□□□ 1.52
AC055874.1-202ENST00000559457 ZNF496Q96IT1 587 aaPredicted RBP24.52■■□□□ 1.52
AC055874.1-202ENST00000559457 MYH14Q7Z406 1995 aaKnown RBP24.5■■□□□ 1.51
AC055874.1-202ENST00000559457 CICQ96RK0 1608 aaPredicted RBP24.5■■□□□ 1.51
AC055874.1-202ENST00000559457 DNAJC10Q8IXB1 793 aa24.49■■□□□ 1.51
AC055874.1-202ENST00000559457 SALL2Q9Y467 1007 aaPredicted RBP24.49■■□□□ 1.51
AC055874.1-202ENST00000559457 FMNL2Q96PY5 1086 aa24.48■■□□□ 1.51
AC055874.1-202ENST00000559457 LAS1LQ9Y4W2 734 aaKnown RBP24.48■■□□□ 1.51
AC055874.1-202ENST00000559457 UBR3Q6ZT12 1888 aa24.47■■□□□ 1.51
AC055874.1-202ENST00000559457 QSER1Q2KHR3 1735 aa24.47■■□□□ 1.51
AC055874.1-202ENST00000559457 HEG1Q9ULI3 1381 aa24.47■■□□□ 1.51
AC055874.1-202ENST00000559457 TFCP2L1Q9NZI6 479 aa24.47■■□□□ 1.51
AC055874.1-202ENST00000559457 TSPYL4Q9UJ04 414 aa24.47■■□□□ 1.51
AC055874.1-202ENST00000559457 AK7Q96M32 723 aa24.46■■□□□ 1.51
AC055874.1-202ENST00000559457 HMGB2P26583 209 aaKnown RBP24.45■■□□□ 1.5
AC055874.1-202ENST00000559457 VSIG10Q8N0Z9 540 aa24.45■■□□□ 1.5
AC055874.1-202ENST00000559457 PDGFDQ9GZP0 370 aaPredicted RBP24.45■■□□□ 1.5
AC055874.1-202ENST00000559457 CCDC27Q2M243 656 aa24.44■■□□□ 1.5
AC055874.1-202ENST00000559457 SMIM5Q71RC9 77 aa24.44■■□□□ 1.5
AC055874.1-202ENST00000559457 CASZ1Q86V15 1759 aa24.44■■□□□ 1.5
AC055874.1-202ENST00000559457 WWC1Q8IX03 1113 aa24.43■■□□□ 1.5
AC055874.1-202ENST00000559457 CHL1O00533 1208 aa24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 GNPATO15228 680 aa24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 CRKLP46109 303 aaKnown RBP24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 EIF4A1P60842 406 aaKnown RBP24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 AMIGO3Q86WK7 504 aa24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 BABAM1Q9NWV8 329 aa24.42■■□□□ 1.5
AC055874.1-202ENST00000559457 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 CNTNAP4Q9C0A0 1308 aa24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 CYP19A1P11511 503 aaPredicted RBP24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 CALD1Q05682 793 aaKnown RBP24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 NCBP3Q53F19 620 aaKnown RBP24.41■■□□□ 1.5
AC055874.1-202ENST00000559457 PHF14O94880 888 aa24.4■■□□□ 1.5
AC055874.1-202ENST00000559457 RC3H1Q5TC82 1133 aaKnown RBP24.4■■□□□ 1.5
AC055874.1-202ENST00000559457 SNRPA1P09661 255 aaKnown RBP24.39■■□□□ 1.49
AC055874.1-202ENST00000559457 INTS5Q6P9B9 1019 aaKnown RBP24.39■■□□□ 1.49
AC055874.1-202ENST00000559457 CFAP44Q96MT7 982 aa24.39■■□□□ 1.49
AC055874.1-202ENST00000559457 ZNF853P0CG23 659 aa24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 COL23A1Q86Y22 540 aaPredicted RBP24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 TEX13AQ9BXU3 409 aaPredicted RBP24.38■■□□□ 1.49
AC055874.1-202ENST00000559457 CCDC87Q9NVE4 849 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms