RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 ATP6V1AP38606 617 aa34.07■■■■□ 3.04
CRNDE-206ENST00000559432 KDM6AO15550 1401 aaPredicted RBP34.06■■■■□ 3.04
CRNDE-206ENST00000559432 COL24A1Q17RW2 1714 aa34.06■■■■□ 3.04
CRNDE-206ENST00000559432 LINC00116Q8NCU8 138 aa34.05■■■■□ 3.04
CRNDE-206ENST00000559432 PHF14O94880 888 aa34.03■■■■□ 3.04
CRNDE-206ENST00000559432 HMOX1P09601 288 aa34.03■■■■□ 3.04
CRNDE-206ENST00000559432 MSL1Q68DK7 614 aa34.03■■■■□ 3.04
CRNDE-206ENST00000559432 YY1P25490 414 aa34.02■■■■□ 3.04
CRNDE-206ENST00000559432 ITPK1Q13572 414 aa34.02■■■■□ 3.04
CRNDE-206ENST00000559432 RBM42Q9BTD8 480 aaKnown RBP34.01■■■■□ 3.03
CRNDE-206ENST00000559432 SSFA2P28290 1259 aa34■■■■□ 3.03
CRNDE-206ENST00000559432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.99■■■■□ 3.03
CRNDE-206ENST00000559432 AKAP4Q5JQC9 854 aa33.99■■■■□ 3.03
CRNDE-206ENST00000559432 GNPATO15228 680 aa33.97■■■■□ 3.03
CRNDE-206ENST00000559432 AMIGO3Q86WK7 504 aa33.96■■■■□ 3.03
CRNDE-206ENST00000559432 NFATC2IPQ8NCF5 419 aa33.96■■■■□ 3.03
CRNDE-206ENST00000559432 UBR3Q6ZT12 1888 aa33.95■■■■□ 3.02
CRNDE-206ENST00000559432 SMIM5Q71RC9 77 aa33.94■■■■□ 3.02
CRNDE-206ENST00000559432 U2SURPO15042 1029 aaKnown RBP33.93■■■■□ 3.02
CRNDE-206ENST00000559432 COL3A1P02461 1466 aaPredicted RBP33.92■■■■□ 3.02
CRNDE-206ENST00000559432 GPR162Q16538 588 aa33.91■■■■□ 3.02
CRNDE-206ENST00000559432 CFAP53Q96M91 514 aa33.91■■■■□ 3.02
CRNDE-206ENST00000559432 SLC4A9Q96Q91 983 aa33.91■■■■□ 3.02
CRNDE-206ENST00000559432 ZNF831Q5JPB2 1677 aa33.9■■■■□ 3.02
CRNDE-206ENST00000559432 PTCD1O75127 700 aaKnown RBP33.9■■■■□ 3.02
CRNDE-206ENST00000559432 MTHFSDQ2M296 383 aaKnown RBP33.89■■■■□ 3.02
CRNDE-206ENST00000559432 RTCBQ9Y3I0 505 aaKnown RBP33.89■■■■□ 3.02
CRNDE-206ENST00000559432 NLGN2Q8NFZ4 835 aa33.88■■■■□ 3.01
CRNDE-206ENST00000559432 SLC52A2Q9HAB3 445 aa33.88■■■■□ 3.01
CRNDE-206ENST00000559432 SCN11AQ9UI33 1791 aa33.88■■■■□ 3.01
CRNDE-206ENST00000559432 RC3H1Q5TC82 1133 aaKnown RBP33.87■■■■□ 3.01
CRNDE-206ENST00000559432 PELP1Q8IZL8 1130 aaKnown RBP33.87■■■■□ 3.01
CRNDE-206ENST00000559432 LGR6Q9HBX8 967 aa33.87■■■■□ 3.01
CRNDE-206ENST00000559432 RNMTO43148 476 aaKnown RBP33.86■■■■□ 3.01
CRNDE-206ENST00000559432 CNTNAP4Q9C0A0 1308 aa33.85■■■■□ 3.01
CRNDE-206ENST00000559432 TRAPPC3LQ5T215 181 aa33.85■■■■□ 3.01
CRNDE-206ENST00000559432 CD2APQ9Y5K6 639 aa33.83■■■■□ 3.01
CRNDE-206ENST00000559432 COL5A3P25940 1745 aaPredicted RBP33.82■■■■□ 3
CRNDE-206ENST00000559432 ADRA2BP18089 450 aa33.81■■■■□ 3
CRNDE-206ENST00000559432 RPS6KA4O75676 772 aa33.8■■■■□ 3
CRNDE-206ENST00000559432 PPP2R1AP30153 589 aa33.8■■■■□ 3
CRNDE-206ENST00000559432 GAS2L2Q8NHY3 880 aa33.8■■■■□ 3
CRNDE-206ENST00000559432 NUDCQ9Y266 331 aa33.8■■■■□ 3
CRNDE-206ENST00000559432 MRC1P22897 1456 aa33.8■■■■□ 3
CRNDE-206ENST00000559432 RFC4P35249 363 aa33.77■■■■□ 3
CRNDE-206ENST00000559432 ARHGEF1Q92888 912 aaKnown RBP33.77■■■■□ 3
CRNDE-206ENST00000559432 CRKLP46109 303 aaKnown RBP33.76■■■□□ 2.99
CRNDE-206ENST00000559432 GNAT3A8MTJ3 354 aa33.74■■■□□ 2.99
CRNDE-206ENST00000559432 SLC39A6Q13433 755 aa33.74■■■□□ 2.99
CRNDE-206ENST00000559432 NLGN1Q8N2Q7 840 aa33.74■■■□□ 2.99
CRNDE-206ENST00000559432 ADAMTS7Q9UKP4 1686 aa33.74■■■□□ 2.99
CRNDE-206ENST00000559432 MMP10P09238 476 aa33.73■■■□□ 2.99
CRNDE-206ENST00000559432 PRKAR2BP31323 418 aa33.72■■■□□ 2.99
CRNDE-206ENST00000559432 CICQ96RK0 1608 aaPredicted RBP33.71■■■□□ 2.99
CRNDE-206ENST00000559432 TJP1Q07157 1748 aa33.71■■■□□ 2.99
CRNDE-206ENST00000559432 GRIN3BO60391 1043 aa33.7■■■□□ 2.99
CRNDE-206ENST00000559432 U2AF1L5P0DN76 240 aaPredicted RBP33.7■■■□□ 2.99
CRNDE-206ENST00000559432 U2AF1Q01081 240 aaKnown RBP eCLIP33.7■■■□□ 2.99
CRNDE-206ENST00000559432 TEFQ10587 303 aa33.7■■■□□ 2.99
CRNDE-206ENST00000559432 DNAJC10Q8IXB1 793 aa33.7■■■□□ 2.99
CRNDE-206ENST00000559432 RSPH6AQ9H0K4 717 aa33.7■■■□□ 2.99
CRNDE-206ENST00000559432 VIRMAQ69YN4 1812 aaKnown RBP33.69■■■□□ 2.98
CRNDE-206ENST00000559432 YBX3P16989 372 aaKnown RBP eCLIP33.68■■■□□ 2.98
CRNDE-206ENST00000559432 TTC5Q8N0Z6 440 aa33.68■■■□□ 2.98
CRNDE-206ENST00000559432 GYS1P13807 737 aa33.67■■■□□ 2.98
CRNDE-206ENST00000559432 CCDC87Q9NVE4 849 aa33.67■■■□□ 2.98
CRNDE-206ENST00000559432 CHD4Q14839 1912 aa33.67■■■□□ 2.98
CRNDE-206ENST00000559432 INTS5Q6P9B9 1019 aaKnown RBP33.66■■■□□ 2.98
CRNDE-206ENST00000559432 KCPQ6ZWJ8 1503 aa33.66■■■□□ 2.98
CRNDE-206ENST00000559432 MYH14Q7Z406 1995 aaKnown RBP33.66■■■□□ 2.98
CRNDE-206ENST00000559432 IL17REQ8NFR9 667 aa33.66■■■□□ 2.98
CRNDE-206ENST00000559432 PHACTR3Q96KR7 559 aa33.66■■■□□ 2.98
CRNDE-206ENST00000559432 VSIG10Q8N0Z9 540 aa33.65■■■□□ 2.98
CRNDE-206ENST00000559432 FCHSD2O94868 740 aa33.63■■■□□ 2.97
CRNDE-206ENST00000559432 CYP19A1P11511 503 aaPredicted RBP33.63■■■□□ 2.97
CRNDE-206ENST00000559432 ZNF784Q8NCA9 323 aaPredicted RBP33.63■■■□□ 2.97
CRNDE-206ENST00000559432 C4AP0C0L4 1744 aa33.62■■■□□ 2.97
CRNDE-206ENST00000559432 USP42Q9H9J4 1324 aaKnown RBP33.62■■■□□ 2.97
CRNDE-206ENST00000559432 PARP3Q9Y6F1 533 aa33.62■■■□□ 2.97
CRNDE-206ENST00000559432 SRP68Q9UHB9 627 aaKnown RBP33.6■■■□□ 2.97
CRNDE-206ENST00000559432 ZPR1O75312 459 aa33.58■■■□□ 2.97
CRNDE-206ENST00000559432 ZNF790Q6PG37 636 aa33.58■■■□□ 2.97
CRNDE-206ENST00000559432 RTF1Q92541 710 aaKnown RBP33.58■■■□□ 2.97
CRNDE-206ENST00000559432 CEMIPQ8WUJ3 1361 aa33.58■■■□□ 2.97
CRNDE-206ENST00000559432 SOS1Q07889 1333 aaPredicted RBP33.57■■■□□ 2.97
CRNDE-206ENST00000559432 UBR2Q8IWV8 1755 aa33.57■■■□□ 2.96
CRNDE-206ENST00000559432 UTRNP46939 3433 aa33.56■■■□□ 2.96
CRNDE-206ENST00000559432 STARD3NLO95772 234 aa33.56■■■□□ 2.96
CRNDE-206ENST00000559432 WWC3Q9ULE0 1092 aa33.56■■■□□ 2.96
CRNDE-206ENST00000559432 TGFB2P61812 414 aa33.55■■■□□ 2.96
CRNDE-206ENST00000559432 FKBP8Q14318 412 aa33.55■■■□□ 2.96
CRNDE-206ENST00000559432 ZBTB1Q9Y2K1 713 aa33.55■■■□□ 2.96
CRNDE-206ENST00000559432 NEFMP07197 916 aa33.54■■■□□ 2.96
CRNDE-206ENST00000559432 ZNF496Q96IT1 587 aaPredicted RBP33.54■■■□□ 2.96
CRNDE-206ENST00000559432 C10orf71Q711Q0 1435 aa33.53■■■□□ 2.96
CRNDE-206ENST00000559432 HEG1Q9ULI3 1381 aa33.53■■■□□ 2.96
CRNDE-206ENST00000559432 BTBD11A6QL63 1104 aa33.53■■■□□ 2.96
CRNDE-206ENST00000559432 TEX13AQ9BXU3 409 aaPredicted RBP33.53■■■□□ 2.96
CRNDE-206ENST00000559432 COL15A1P39059 1388 aa33.52■■■□□ 2.96
CRNDE-206ENST00000559432 USPL1Q5W0Q7 1092 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms