RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MAP9Q49MG5 647 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 PPFIA3O75145 1194 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 PPP2R3AQ06190 1150 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 A6NNZ2 444 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 TUBB8Q3ZCM7 444 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 JARID2Q92833 1246 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC113Q9H0I3 377 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 A0A087WUV0 522 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 ZBTB22O15209 634 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 UBE2HP62256 183 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 AMPHP49418 695 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF622Q969S3 477 aaKnown RBP eCLIP4.29□□□□□ -1.721e-9■■□□□ 12.4
ATXN3-248ENST00000558190 NOP2P46087 812 aaKnown RBP4.29□□□□□ -1.72
ATXN3-248ENST00000558190 GNAI1P63096 354 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF75DP51815 510 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 ZSCAN26Q16670 478 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 KLHL10Q6JEL2 608 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 FAM212AQ96EL1 285 aa4.29□□□□□ -1.72
ATXN3-248ENST00000558190 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 TMX3Q96JJ7 454 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 VEZTQ9HBM0 779 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 NUCB1Q02818 461 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 UTP14AQ9BVJ6 771 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 SLC12A5Q9H2X9 1139 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 TERF2Q15554 542 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 GAS2L2Q8NHY3 880 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC155Q8N6L0 562 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 TANGO6Q9C0B7 1094 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 N4BP3O15049 544 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 HMOX1P09601 288 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CTNNA3Q9UI47 895 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 HSF2BPO75031 334 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 RPUSD2Q8IZ73 545 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 ZNF500O60304 480 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 DNA2P51530 1060 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 LRRFIP1Q32MZ4 808 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CEP162Q5TB80 1403 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 SSH1Q8WYL5 1049 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CARD6Q9BX69 1037 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 MVPQ14764 893 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 LMBR1Q8WVP7 490 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 GADD45BO75293 160 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 TBC1D9Q6ZT07 1266 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 FBF1Q8TES7 1133 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.72
ATXN3-248ENST00000558190 FBXO3Q9UK99 471 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 IL1RAPL2Q9NP60 686 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC69A6NI79 296 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 STX6O43752 255 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 MTMR7Q9Y216 660 aa4.28□□□□□ -1.72
ATXN3-248ENST00000558190 MAATS1Q7Z4T9 603 aa4.28□□□□□ -1.73
ATXN3-248ENST00000558190 GBP5Q96PP8 586 aa4.28□□□□□ -1.73
ATXN3-248ENST00000558190 TUBB2AQ13885 445 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CTNNBL1Q8WYA6 563 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ERO1AQ96HE7 468 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 TUBB2BQ9BVA1 445 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CTAGE9A4FU28 777 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 MYO15BQ96JP2 1530 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 UBTFL1P0CB47 393 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ZBTB16Q05516 673 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ERCC6LQ2NKX8 1250 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 FMNL3Q8IVF7 1028 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 TMEM57Q8N5G2 664 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 FSD2A1L4K1 749 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CCT2P78371 535 aaKnown RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 IFT88Q13099 833 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 IQCEQ6IPM2 695 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 GTF2E1P29083 439 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 PPP6R1Q9UPN7 881 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 MORC2Q9Y6X9 1032 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 SETD5Q9C0A6 1442 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 USO1O60763 962 aaKnown RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 A0A1B0GUA9 196 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 BCL2L12Q9HB09 334 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 LIG1P18858 919 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 IRX5P78411 483 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 FKBP15Q5T1M5 1219 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 STIM1Q13586 685 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 RAB3GAP1Q15042 981 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC6Q16204 474 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 SH2B1Q9NRF2 756 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 USP16Q9Y5T5 823 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 FAM76AQ8TAV0 307 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ZHX3Q9H4I2 956 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 HNRNPMP52272 730 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ZC3H6P61129 1189 aaKnown RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ZNF853P0CG23 659 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 IFNKQ9P0W0 207 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 ANKS4BQ8N8V4 417 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 RPSAP08865 295 aaKnown RBP4.27□□□□□ -1.73
ATXN3-248ENST00000558190 TMEM51Q9NW97 253 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 NRBP1Q9UHY1 535 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC82Q8N4S0 544 aa4.27□□□□□ -1.73
ATXN3-248ENST00000558190 DDX41Q9UJV9 622 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms