RNA–Protein interactions for RNA: ENST00000558102.1

EMC4-205, Transcript of ER membrane protein complex subunit 4, humanhuman

TSL 2

Gene EMC4, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC4-205ENST00000558102 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
EMC4-205ENST00000558102 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
EMC4-205ENST00000558102 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
EMC4-205ENST00000558102 UBR3Q6ZT12 1888 aa21.53■■□□□ 1.04
EMC4-205ENST00000558102 KDRP35968 1356 aa21.52■■□□□ 1.04
EMC4-205ENST00000558102 YY1P25490 414 aa21.52■■□□□ 1.04
EMC4-205ENST00000558102 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
EMC4-205ENST00000558102 NPC1L1Q9UHC9 1359 aa21.51■■□□□ 1.03
EMC4-205ENST00000558102 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
EMC4-205ENST00000558102 SCN11AQ9UI33 1791 aa21.51■■□□□ 1.03
EMC4-205ENST00000558102 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
EMC4-205ENST00000558102 ITPK1Q13572 414 aa21.5■■□□□ 1.03
EMC4-205ENST00000558102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.49■■□□□ 1.03
EMC4-205ENST00000558102 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
EMC4-205ENST00000558102 GNPATO15228 680 aa21.49■■□□□ 1.03
EMC4-205ENST00000558102 SMIM5Q71RC9 77 aa21.49■■□□□ 1.03
EMC4-205ENST00000558102 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
EMC4-205ENST00000558102 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
EMC4-205ENST00000558102 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
EMC4-205ENST00000558102 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
EMC4-205ENST00000558102 SSFA2P28290 1259 aa21.47■■□□□ 1.03
EMC4-205ENST00000558102 GPR162Q16538 588 aa21.47■■□□□ 1.03
EMC4-205ENST00000558102 PTCD1O75127 700 aaKnown RBP21.46■■□□□ 1.03
EMC4-205ENST00000558102 CHD4Q14839 1912 aa21.45■■□□□ 1.02
EMC4-205ENST00000558102 AMIGO3Q86WK7 504 aa21.45■■□□□ 1.02
EMC4-205ENST00000558102 CFAP53Q96M91 514 aa21.45■■□□□ 1.02
EMC4-205ENST00000558102 SLC4A9Q96Q91 983 aa21.43■■□□□ 1.02
EMC4-205ENST00000558102 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
EMC4-205ENST00000558102 ZNF831Q5JPB2 1677 aa21.43■■□□□ 1.02
EMC4-205ENST00000558102 COL5A3P25940 1745 aaPredicted RBP21.42■■□□□ 1.02
EMC4-205ENST00000558102 MTHFSDQ2M296 383 aaKnown RBP21.42■■□□□ 1.02
EMC4-205ENST00000558102 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
EMC4-205ENST00000558102 LGR6Q9HBX8 967 aa21.42■■□□□ 1.02
EMC4-205ENST00000558102 TRAPPC3LQ5T215 181 aa21.41■■□□□ 1.02
EMC4-205ENST00000558102 COL3A1P02461 1466 aaPredicted RBP21.4■■□□□ 1.02
EMC4-205ENST00000558102 RNMTO43148 476 aaKnown RBP21.4■■□□□ 1.02
EMC4-205ENST00000558102 SLC52A2Q9HAB3 445 aa21.4■■□□□ 1.02
EMC4-205ENST00000558102 RC3H1Q5TC82 1133 aaKnown RBP21.39■■□□□ 1.01
EMC4-205ENST00000558102 NUDCQ9Y266 331 aa21.39■■□□□ 1.01
EMC4-205ENST00000558102 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.01
EMC4-205ENST00000558102 CNTNAP4Q9C0A0 1308 aa21.37■■□□□ 1.01
EMC4-205ENST00000558102 PPP2R1AP30153 589 aa21.37■■□□□ 1.01
EMC4-205ENST00000558102 CD2APQ9Y5K6 639 aa21.37■■□□□ 1.01
EMC4-205ENST00000558102 RPS6KA4O75676 772 aa21.36■■□□□ 1.01
EMC4-205ENST00000558102 RFC4P35249 363 aa21.36■■□□□ 1.01
EMC4-205ENST00000558102 ADRA2BP18089 450 aa21.35■■□□□ 1.01
EMC4-205ENST00000558102 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
EMC4-205ENST00000558102 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
EMC4-205ENST00000558102 GAS2L2Q8NHY3 880 aa21.35■■□□□ 1.01
EMC4-205ENST00000558102 ARHGEF1Q92888 912 aaKnown RBP21.35■■□□□ 1.01
EMC4-205ENST00000558102 TJP1Q07157 1748 aa21.35■■□□□ 1.01
EMC4-205ENST00000558102 GNAT3A8MTJ3 354 aa21.33■■□□□ 1.01
EMC4-205ENST00000558102 MMP10P09238 476 aa21.33■■□□□ 1.01
EMC4-205ENST00000558102 U2AF1L5P0DN76 240 aaPredicted RBP21.33■■□□□ 1.01
EMC4-205ENST00000558102 PRKAR2BP31323 418 aa21.33■■□□□ 1.01
EMC4-205ENST00000558102 U2AF1Q01081 240 aaKnown RBP eCLIP21.33■■□□□ 1.01
EMC4-205ENST00000558102 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
EMC4-205ENST00000558102 MRC1P22897 1456 aa21.32■■□□□ 1
EMC4-205ENST00000558102 TEFQ10587 303 aa21.32■■□□□ 1
EMC4-205ENST00000558102 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
EMC4-205ENST00000558102 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
EMC4-205ENST00000558102 C4AP0C0L4 1744 aa21.31■■□□□ 1
EMC4-205ENST00000558102 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
EMC4-205ENST00000558102 GRIN3BO60391 1043 aa21.3■■□□□ 1
EMC4-205ENST00000558102 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
EMC4-205ENST00000558102 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
EMC4-205ENST00000558102 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
EMC4-205ENST00000558102 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
EMC4-205ENST00000558102 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 13e-9■■□□□ 12
EMC4-205ENST00000558102 WWC3Q9ULE0 1092 aa21.28■■□□□ 1
EMC4-205ENST00000558102 GYS1P13807 737 aa21.27■■□□□ 1
EMC4-205ENST00000558102 IL17REQ8NFR9 667 aa21.27■■□□□ 1
EMC4-205ENST00000558102 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
EMC4-205ENST00000558102 INTS5Q6P9B9 1019 aaKnown RBP21.26■□□□□ 0.99
EMC4-205ENST00000558102 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
EMC4-205ENST00000558102 KCPQ6ZWJ8 1503 aa21.25■□□□□ 0.99
EMC4-205ENST00000558102 ZPR1O75312 459 aa21.25■□□□□ 0.99
EMC4-205ENST00000558102 FCHSD2O94868 740 aa21.25■□□□□ 0.99
EMC4-205ENST00000558102 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
EMC4-205ENST00000558102 ZNF784Q8NCA9 323 aaPredicted RBP21.25■□□□□ 0.99
EMC4-205ENST00000558102 RTF1Q92541 710 aaKnown RBP21.25■□□□□ 0.99
EMC4-205ENST00000558102 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
EMC4-205ENST00000558102 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
EMC4-205ENST00000558102 NEFMP07197 916 aa21.24■□□□□ 0.99
EMC4-205ENST00000558102 VSIG10Q8N0Z9 540 aa21.24■□□□□ 0.99
EMC4-205ENST00000558102 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
EMC4-205ENST00000558102 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
EMC4-205ENST00000558102 STARD3NLO95772 234 aa21.22■□□□□ 0.99
EMC4-205ENST00000558102 ZNF790Q6PG37 636 aa21.22■□□□□ 0.99
EMC4-205ENST00000558102 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
EMC4-205ENST00000558102 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
EMC4-205ENST00000558102 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
EMC4-205ENST00000558102 FKBP8Q14318 412 aa21.21■□□□□ 0.99
EMC4-205ENST00000558102 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
EMC4-205ENST00000558102 ZBTB1Q9Y2K1 713 aa21.21■□□□□ 0.99
EMC4-205ENST00000558102 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
EMC4-205ENST00000558102 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
EMC4-205ENST00000558102 USPL1Q5W0Q7 1092 aa21.19■□□□□ 0.98
EMC4-205ENST00000558102 MCM10Q7L590 875 aa21.19■□□□□ 0.98
EMC4-205ENST00000558102 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms